RNA–Protein interactions for RNA: ENST00000461544.2

PCBP4-204, Transcript of poly(rC) binding protein 4, humanhuman

TSL 4

Gene PCBP4, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-204ENST00000461544 NISCHQ9Y2I1 1504 aa31.91■■■□□ 2.7
PCBP4-204ENST00000461544 ABCC9O60706 1549 aa29.47■■■□□ 2.31
PCBP4-204ENST00000461544 CCDC180Q9P1Z9 1646 aa28.81■■■□□ 2.2
PCBP4-204ENST00000461544 DNAJC5BQ9UF47 199 aa28.25■■■□□ 2.11
PCBP4-204ENST00000461544 RB1CC1Q8TDY2 1594 aa27.72■■■□□ 2.03
PCBP4-204ENST00000461544 PABPN1Q86U42 306 aaKnown RBP eCLIP27.4■■□□□ 1.98
PCBP4-204ENST00000461544 NACADO15069 1562 aa27.39■■□□□ 1.98
PCBP4-204ENST00000461544 DCAF8L2P0C7V8 631 aa27.26■■□□□ 1.95
PCBP4-204ENST00000461544 UNC13AQ9UPW8 1703 aa27.13■■□□□ 1.93
PCBP4-204ENST00000461544 BICRAQ9NZM4 1560 aa27.01■■□□□ 1.91
PCBP4-204ENST00000461544 MYO15BQ96JP2 1530 aa26.8■■□□□ 1.88
PCBP4-204ENST00000461544 CECR2Q9BXF3 1484 aa26.58■■□□□ 1.85
PCBP4-204ENST00000461544 CC2D2AQ9P2K1 1620 aa26.56■■□□□ 1.84
PCBP4-204ENST00000461544 SHROOM4Q9ULL8 1493 aa26.45■■□□□ 1.82
PCBP4-204ENST00000461544 ZCCHC6Q5VYS8 1495 aaKnown RBP26.42■■□□□ 1.82
PCBP4-204ENST00000461544 EIF4G1Q04637 1599 aaKnown RBP26.35■■□□□ 1.81
PCBP4-204ENST00000461544 SCRIBQ14160 1630 aa26.28■■□□□ 1.8
PCBP4-204ENST00000461544 DNAJC5Q9H3Z4 198 aa26.28■■□□□ 1.8
PCBP4-204ENST00000461544 DCAF1Q9Y4B6 1507 aa26.27■■□□□ 1.8
PCBP4-204ENST00000461544 CUX2O14529 1486 aa25.55■■□□□ 1.68
PCBP4-204ENST00000461544 ERCC6Q03468 1493 aa25.43■■□□□ 1.66
PCBP4-204ENST00000461544 NCAPD3P42695 1498 aa25.34■■□□□ 1.65
PCBP4-204ENST00000461544 ATAD2BQ9ULI0 1458 aa25.19■■□□□ 1.62
PCBP4-204ENST00000461544 NESP48681 1621 aa25.18■■□□□ 1.62
PCBP4-204ENST00000461544 HMGXB3Q12766 1538 aa25.05■■□□□ 1.6
PCBP4-204ENST00000461544 SMARCA2P51531 1590 aa25.04■■□□□ 1.6
PCBP4-204ENST00000461544 SMARCA4P51532 1647 aa25■■□□□ 1.59
PCBP4-204ENST00000461544 THOC2Q8NI27 1593 aaKnown RBP24.97■■□□□ 1.59
PCBP4-204ENST00000461544 TRIM41Q8WV44 630 aa24.9■■□□□ 1.58
PCBP4-204ENST00000461544 BAZ1BQ9UIG0 1483 aaKnown RBP24.89■■□□□ 1.57
PCBP4-204ENST00000461544 LAMC3Q9Y6N6 1575 aa24.81■■□□□ 1.56
PCBP4-204ENST00000461544 KIF21AQ7Z4S6 1674 aa24.78■■□□□ 1.56
PCBP4-204ENST00000461544 BAZ1AQ9NRL2 1556 aaPredicted RBP24.76■■□□□ 1.55
PCBP4-204ENST00000461544 PEG3Q9GZU2 1588 aa24.74■■□□□ 1.55
PCBP4-204ENST00000461544 PDS5BQ9NTI5 1447 aa24.7■■□□□ 1.55
PCBP4-204ENST00000461544 MROH2BQ7Z745 1585 aa24.62■■□□□ 1.53
PCBP4-204ENST00000461544 CADPSQ9ULU8 1353 aa24.54■■□□□ 1.52
PCBP4-204ENST00000461544 MRC2Q9UBG0 1479 aa24.53■■□□□ 1.52
PCBP4-204ENST00000461544 WDR62O43379 1518 aa24.49■■□□□ 1.51
PCBP4-204ENST00000461544 OSCARQ8IYS5 282 aa24.36■■□□□ 1.49
PCBP4-204ENST00000461544 CEP164Q9UPV0 1460 aa24.32■■□□□ 1.48
PCBP4-204ENST00000461544 WIZO95785 1651 aa24.29■■□□□ 1.48
PCBP4-204ENST00000461544 FANCD2Q9BXW9 1451 aa24.26■■□□□ 1.47
PCBP4-204ENST00000461544 CFTRP13569 1480 aa24.14■■□□□ 1.46
PCBP4-204ENST00000461544 URB2Q14146 1524 aaKnown RBP24.12■■□□□ 1.45
PCBP4-204ENST00000461544 RIMBP3CA6NJZ7 1639 aa24.09■■□□□ 1.45
PCBP4-204ENST00000461544 RIMBP3BA6NNM3 1639 aa24.09■■□□□ 1.45
PCBP4-204ENST00000461544 RIMBP3Q9UFD9 1639 aa24.09■■□□□ 1.45
PCBP4-204ENST00000461544 RSF1Q96T23 1441 aaPredicted RBP24.07■■□□□ 1.44
PCBP4-204ENST00000461544 ARHGEF11O15085 1522 aa23.95■■□□□ 1.43
PCBP4-204ENST00000461544 ZNF608Q9ULD9 1512 aaPredicted RBP23.94■■□□□ 1.42
PCBP4-204ENST00000461544 TOP2AP11388 1531 aaKnown RBP23.93■■□□□ 1.42
PCBP4-204ENST00000461544 CYB5RLQ6IPT4 315 aa23.87■■□□□ 1.41
PCBP4-204ENST00000461544 IFT140Q96RY7 1462 aa23.85■■□□□ 1.41
PCBP4-204ENST00000461544 PRDM2Q13029 1718 aa23.79■■□□□ 1.4
PCBP4-204ENST00000461544 TRHP20396 242 aaPredicted RBP23.76■■□□□ 1.39
PCBP4-204ENST00000461544 TOPBP1Q92547 1522 aa23.74■■□□□ 1.39
PCBP4-204ENST00000461544 EIF4G3O43432 1585 aaKnown RBP23.72■■□□□ 1.39
PCBP4-204ENST00000461544 CCDC88BA6NC98 1476 aa23.68■■□□□ 1.38
PCBP4-204ENST00000461544 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
PCBP4-204ENST00000461544 CHD1O14646 1710 aa23.66■■□□□ 1.38
PCBP4-204ENST00000461544 AQRO60306 1485 aaKnown RBP eCLIP23.66■■□□□ 1.38
PCBP4-204ENST00000461544 FBLN2P98095 1184 aa23.62■■□□□ 1.37
PCBP4-204ENST00000461544 ABCC8Q09428 1581 aa23.6■■□□□ 1.37
PCBP4-204ENST00000461544 TARBP1Q13395 1621 aaKnown RBP23.58■■□□□ 1.36
PCBP4-204ENST00000461544 DNMBPQ6XZF7 1577 aa23.57■■□□□ 1.36
PCBP4-204ENST00000461544 POLA1P09884 1462 aaPredicted RBP23.47■■□□□ 1.35
PCBP4-204ENST00000461544 AEBP2Q6ZN18 517 aaPredicted RBP23.45■■□□□ 1.34
PCBP4-204ENST00000461544 RAD54L2Q9Y4B4 1467 aa23.44■■□□□ 1.34
PCBP4-204ENST00000461544 TDRD9Q8NDG6 1382 aaKnown RBP23.43■■□□□ 1.34
PCBP4-204ENST00000461544 CLASP1Q7Z460 1538 aa23.38■■□□□ 1.33
PCBP4-204ENST00000461544 SOGA1O94964 1423 aa23.37■■□□□ 1.33
PCBP4-204ENST00000461544 SNAPC4Q5SXM2 1469 aa23.35■■□□□ 1.33
PCBP4-204ENST00000461544 CHMP7Q8WUX9 453 aaPredicted RBP23.32■■□□□ 1.32
PCBP4-204ENST00000461544 SUPT5HO00267 1087 aaKnown RBP23.31■■□□□ 1.32
PCBP4-204ENST00000461544 SYNJ1O43426 1573 aa23.27■■□□□ 1.32
PCBP4-204ENST00000461544 FGD5Q6ZNL6 1462 aa23.24■■□□□ 1.31
PCBP4-204ENST00000461544 MAGI1Q96QZ7 1491 aaPredicted RBP23.23■■□□□ 1.31
PCBP4-204ENST00000461544 WDR97A6NE52 1622 aa23.2■■□□□ 1.3
PCBP4-204ENST00000461544 GRIN2BQ13224 1484 aa23.19■■□□□ 1.3
PCBP4-204ENST00000461544 SYNJ2O15056 1496 aa23.18■■□□□ 1.3
PCBP4-204ENST00000461544 GAPVD1Q14C86 1478 aa23.18■■□□□ 1.3
PCBP4-204ENST00000461544 CUX1P39880 1505 aa23.14■■□□□ 1.3
PCBP4-204ENST00000461544 PBRM1Q86U86 1689 aa23.05■■□□□ 1.28
PCBP4-204ENST00000461544 ERCC6L2Q5T890 1561 aa23.04■■□□□ 1.28
PCBP4-204ENST00000461544 ABCA5Q8WWZ7 1642 aa22.93■■□□□ 1.26
PCBP4-204ENST00000461544 ABCA10Q8WWZ4 1543 aa22.92■■□□□ 1.26
PCBP4-204ENST00000461544 GRIN2AQ12879 1464 aa22.91■■□□□ 1.26
PCBP4-204ENST00000461544 CEP170Q5SW79 1584 aa22.89■■□□□ 1.26
PCBP4-204ENST00000461544 NUP160Q12769 1436 aa22.85■■□□□ 1.25
PCBP4-204ENST00000461544 KIF13AQ9H1H9 1805 aa22.83■■□□□ 1.25
PCBP4-204ENST00000461544 SHROOM2Q13796 1616 aa22.81■■□□□ 1.24
PCBP4-204ENST00000461544 ADAMTS12P58397 1594 aa22.8■■□□□ 1.24
PCBP4-204ENST00000461544 BIVM-ERCC5R4GMW8 1640 aa22.75■■□□□ 1.23
PCBP4-204ENST00000461544 WRNQ14191 1432 aaPredicted RBP eCLIP22.73■■□□□ 1.23
PCBP4-204ENST00000461544 TOP2BQ02880 1626 aa22.72■■□□□ 1.23
PCBP4-204ENST00000461544 FHAD1B1AJZ9 1412 aa22.72■■□□□ 1.23
PCBP4-204ENST00000461544 PRG4Q92954 1404 aaPredicted RBP22.7■■□□□ 1.22
PCBP4-204ENST00000461544 FAM69CQ0P6D2 419 aa22.68■■□□□ 1.22
PCBP4-204ENST00000461544 JPH4Q96JJ6 628 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms