Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 NDUFS2-207ENST00000475570 506 ntTSL 216.96■□□□□ 0.312e-9■■□□□ 12.9
PRPF8Q6P2Q9 NDUFS2-209ENST00000479948 681 ntTSL 316.65■□□□□ 0.262e-9■■□□□ 12.9
PRPF8Q6P2Q9 PKD1-236ENST00000568796 447 ntTSL 313.58□□□□□ -0.242e-8■■□□□ 12.9
PRPF8Q6P2Q9 CHD2-214ENST00000628181 545 ntTSL 54.04□□□□□ -1.767e-7■■□□□ 12.9
PRPF8Q6P2Q9 MIR144-201ENST00000384886 86 ntBASIC1.26□□□□□ -2.212e-20■■□□□ 12.9
PRPF8Q6P2Q9 GRTP1-204ENST00000476439 877 ntTSL 216.16■□□□□ 0.183e-15■■□□□ 12.9
PRPF8Q6P2Q9 SCML1-207ENST00000487842 4615 ntTSL 1 (best)4.04□□□□□ -1.763e-18■■□□□ 12.9
PRPF8Q6P2Q9 MFSD3-204ENST00000534427 849 ntTSL 214.71□□□□□ -0.057e-11■■□□□ 12.9
PRPF8Q6P2Q9 BRD4-210ENST00000601941 604 ntTSL 59.71□□□□□ -0.863e-13■■□□□ 12.9
PRPF8Q6P2Q9 SEPT5-212ENST00000470814 2353 ntTSL 515.73■□□□□ 0.111e-8■■□□□ 12.9
PRPF8Q6P2Q9 SEPT5-214ENST00000480423 563 ntTSL 415.23■□□□□ 0.031e-8■■□□□ 12.9
PRPF8Q6P2Q9 WFS1-201ENST00000226760 3640 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.774e-7■■□□□ 12.9
PRPF8Q6P2Q9 WFS1-202ENST00000503569 3255 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.134e-7■■□□□ 12.9
PRPF8Q6P2Q9 ARFGAP2-221ENST00000529599 555 ntTSL 48.31□□□□□ -1.082e-14■■□□□ 12.9
PRPF8Q6P2Q9 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.79■□□□□ 0.285e-17■■□□□ 12.9
PRPF8Q6P2Q9 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.94□□□□□ -0.185e-17■■□□□ 12.9
PRPF8Q6P2Q9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.245e-17■■□□□ 12.9
PRPF8Q6P2Q9 SERF2-211ENST00000430901 483 ntTSL 412.33□□□□□ -0.445e-17■■□□□ 12.9
PRPF8Q6P2Q9 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.28□□□□□ -0.445e-17■■□□□ 12.9
PRPF8Q6P2Q9 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.485e-17■■□□□ 12.9
PRPF8Q6P2Q9 SERF2-206ENST00000409291 807 ntTSL 3 BASIC11.93□□□□□ -0.55e-17■■□□□ 12.9
PRPF8Q6P2Q9 SERF2-212ENST00000445816 2099 ntTSL 311.38□□□□□ -0.595e-17■■□□□ 12.9
PRPF8Q6P2Q9 SERF2-205ENST00000403425 690 ntTSL 2 BASIC11.05□□□□□ -0.645e-17■■□□□ 12.9
PRPF8Q6P2Q9 SERF2-215ENST00000475927 692 ntTSL 211.05□□□□□ -0.645e-17■■□□□ 12.9
PRPF8Q6P2Q9 SERF2-204ENST00000402131 586 ntTSL 2 BASIC11.02□□□□□ -0.655e-17■■□□□ 12.9
PRPF8Q6P2Q9 SERF2-210ENST00000409960 1032 ntTSL 1 (best) BASIC10.34□□□□□ -0.755e-17■■□□□ 12.9
PRPF8Q6P2Q9 SERF2-216ENST00000486144 1030 ntTSL 210.34□□□□□ -0.755e-17■■□□□ 12.9
PRPF8Q6P2Q9 SERF2-202ENST00000339624 506 ntTSL 2 BASIC9.75□□□□□ -0.855e-17■■□□□ 12.9
PRPF8Q6P2Q9 NSD2-214ENST00000505643 990 ntTSL 313.48□□□□□ -0.255e-7■■□□□ 12.9
PRPF8Q6P2Q9 PHKB-209ENST00000566275 1375 ntTSL 36.05□□□□□ -1.442e-6■■□□□ 12.9
PRPF8Q6P2Q9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.045e-15■■□□□ 12.9
PRPF8Q6P2Q9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.065e-15■■□□□ 12.9
PRPF8Q6P2Q9 ABCB6-204ENST00000443805 679 ntTSL 212.72□□□□□ -0.371e-6■■□□□ 12.9
PRPF8Q6P2Q9 ABCB6-208ENST00000487380 768 ntTSL 210.34□□□□□ -0.751e-6■■□□□ 12.9
PRPF8Q6P2Q9 LRP8-211ENST00000496580 507 ntTSL 29.98□□□□□ -0.814e-7■■□□□ 12.9
PRPF8Q6P2Q9 ABCC3-212ENST00000513511 1042 ntTSL 511.83□□□□□ -0.512e-11■■□□□ 12.9
PRPF8Q6P2Q9 KCTD15-208ENST00000590385 666 ntTSL 313.87□□□□□ -0.193e-9■■□□□ 12.9
PRPF8Q6P2Q9 MLLT6-206ENST00000615858 1208 ntTSL 49.45□□□□□ -0.96e-7■■□□□ 12.9
PRPF8Q6P2Q9 SOD2-212ENST00000540491 454 ntTSL 316.75■□□□□ 0.271e-12■■□□□ 12.9
PRPF8Q6P2Q9 AP4M1-214ENST00000478501 892 ntTSL 519.18■□□□□ 0.665e-8■■□□□ 12.9
PRPF8Q6P2Q9 AP4M1-207ENST00000438383 1091 ntTSL 514.76□□□□□ -0.055e-8■■□□□ 12.9
PRPF8Q6P2Q9 AP4M1-202ENST00000394061 813 ntTSL 514.74□□□□□ -0.055e-8■■□□□ 12.9
PRPF8Q6P2Q9 AP4M1-209ENST00000445208 1681 ntTSL 512.79□□□□□ -0.365e-8■■□□□ 12.9
PRPF8Q6P2Q9 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.365e-8■■□□□ 12.9
PRPF8Q6P2Q9 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.79□□□□□ -0.365e-8■■□□□ 12.9
PRPF8Q6P2Q9 AP4M1-213ENST00000463195 1020 ntTSL 212.27□□□□□ -0.455e-8■■□□□ 12.9
PRPF8Q6P2Q9 AP4M1-208ENST00000439416 921 ntTSL 511.88□□□□□ -0.515e-8■■□□□ 12.9
PRPF8Q6P2Q9 CLK2-206ENST00000484699 585 ntTSL 211.44□□□□□ -0.586e-45■■□□□ 12.9
PRPF8Q6P2Q9 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.625e-8■■□□□ 12.9
PRPF8Q6P2Q9 AP4M1-203ENST00000416938 3408 ntTSL 211.03□□□□□ -0.645e-8■■□□□ 12.9
PRPF8Q6P2Q9 AP4M1-211ENST00000446007 960 ntTSL 39.45□□□□□ -0.95e-8■■□□□ 12.9
PRPF8Q6P2Q9 SRSF10-216ENST00000497214 526 ntTSL 34.71□□□□□ -1.664e-12■■□□□ 12.9
PRPF8Q6P2Q9 SFXN5-214ENST00000482289 895 ntTSL 1 (best)17.18■□□□□ 0.344e-15■■□□□ 12.9
PRPF8Q6P2Q9 SFXN5-215ENST00000482542 546 ntTSL 412.09□□□□□ -0.474e-15■■□□□ 12.9
PRPF8Q6P2Q9 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC11.64□□□□□ -0.555e-8■■□□□ 12.9
PRPF8Q6P2Q9 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC10.65□□□□□ -0.75e-8■■□□□ 12.9
PRPF8Q6P2Q9 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC10.24□□□□□ -0.775e-8■■□□□ 12.9
PRPF8Q6P2Q9 SHANK2-205ENST00000412252 1376 ntTSL 59.9□□□□□ -0.835e-8■■□□□ 12.9
PRPF8Q6P2Q9 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC9.84□□□□□ -0.835e-8■■□□□ 12.9
PRPF8Q6P2Q9 SHANK2-206ENST00000424924 6821 ntTSL 58.56□□□□□ -1.045e-8■■□□□ 12.9
PRPF8Q6P2Q9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.214e-8■■□□□ 12.9
PRPF8Q6P2Q9 MAP1LC3B-206ENST00000564844 3085 ntTSL 1 (best)16■□□□□ 0.154e-8■■□□□ 12.9
PRPF8Q6P2Q9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.02■□□□□ -04e-8■■□□□ 12.9
PRPF8Q6P2Q9 MAP1LC3B-208ENST00000570189 1259 ntTSL 1 (best)14.8□□□□□ -0.044e-8■■□□□ 12.9
PRPF8Q6P2Q9 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.414e-8■■□□□ 12.9
PRPF8Q6P2Q9 NUP62CL-202ENST00000421752 618 ntTSL 212.19□□□□□ -0.464e-8■■□□□ 12.9
PRPF8Q6P2Q9 MRPL20-205ENST00000492508 588 ntTSL 29.47□□□□□ -0.899e-10■■□□□ 12.9
PRPF8Q6P2Q9 PCK2-209ENST00000559503 826 ntTSL 59.05□□□□□ -0.964e-8■■□□□ 12.9
PRPF8Q6P2Q9 ZCCHC11-211ENST00000474453 1010 ntTSL 57.55□□□□□ -1.24e-8■■□□□ 12.9
PRPF8Q6P2Q9 CREG1-202ENST00000466652 794 ntTSL 36.85□□□□□ -1.314e-8■■□□□ 12.9
PRPF8Q6P2Q9 MAP1LC3B-205ENST00000564638 735 ntTSL 26.03□□□□□ -1.444e-8■■□□□ 12.9
PRPF8Q6P2Q9 ZCCHC11-206ENST00000469810 3757 ntTSL 25.19□□□□□ -1.584e-8■■□□□ 12.9
PRPF8Q6P2Q9 ZCCHC11-207ENST00000470212 775 ntTSL 24.32□□□□□ -1.724e-8■■□□□ 12.9
PRPF8Q6P2Q9 ZCCHC11-221ENST00000531722 1016 ntTSL 33.63□□□□□ -1.834e-8■■□□□ 12.9
PRPF8Q6P2Q9 PPP1CB-204ENST00000418910 281 ntTSL 20.49□□□□□ -2.334e-8■■□□□ 12.9
PRPF8Q6P2Q9 PNPLA6-211ENST00000595264 800 ntTSL 313.91□□□□□ -0.185e-7■■□□□ 12.9
PRPF8Q6P2Q9 ATAT1-207ENST00000462304 400 ntTSL 39.66□□□□□ -0.862e-6■■□□□ 12.9
PRPF8Q6P2Q9 NSD2-211ENST00000502425 421 ntTSL 35.76□□□□□ -1.495e-7■■□□□ 12.9
PRPF8Q6P2Q9 SRSF7-203ENST00000415527 1135 ntTSL 512.5□□□□□ -0.413e-7■■□□□ 12.9
PRPF8Q6P2Q9 AGPAT3-213ENST00000479117 1510 ntTSL 514.04□□□□□ -0.166e-8■■□□□ 12.9
PRPF8Q6P2Q9 AGPAT3-206ENST00000422850 1003 ntTSL 513.74□□□□□ -0.216e-8■■□□□ 12.9
PRPF8Q6P2Q9 AGPAT3-210ENST00000457068 924 ntTSL 313.74□□□□□ -0.216e-8■■□□□ 12.9
PRPF8Q6P2Q9 AGPAT3-214ENST00000481319 616 ntTSL 312.37□□□□□ -0.436e-8■■□□□ 12.9
PRPF8Q6P2Q9 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.586e-8■■□□□ 12.9
PRPF8Q6P2Q9 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.76e-8■■□□□ 12.9
PRPF8Q6P2Q9 AGPAT3-207ENST00000445582 582 ntTSL 310.68□□□□□ -0.76e-8■■□□□ 12.9
PRPF8Q6P2Q9 AGPAT3-203ENST00000398058 4338 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.736e-8■■□□□ 12.9
PRPF8Q6P2Q9 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.746e-8■■□□□ 12.9
PRPF8Q6P2Q9 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.746e-8■■□□□ 12.9
PRPF8Q6P2Q9 CLK1-212ENST00000482590 626 ntTSL 25.47□□□□□ -1.532e-11■■□□□ 12.9
PRPF8Q6P2Q9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.14■□□□□ 0.011e-6■■□□□ 12.9
PRPF8Q6P2Q9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.192e-6■■□□□ 12.9
PRPF8Q6P2Q9 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.072e-6■■□□□ 12.9
PRPF8Q6P2Q9 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.272e-6■■□□□ 12.9
PRPF8Q6P2Q9 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.362e-6■■□□□ 12.9
PRPF8Q6P2Q9 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.412e-6■■□□□ 12.9
PRPF8Q6P2Q9 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.22□□□□□ -0.452e-6■■□□□ 12.9
PRPF8Q6P2Q9 ALYREF-201ENST00000504015 254 ntTSL 32.81□□□□□ -1.963e-6■■□□□ 12.9
PRPF8Q6P2Q9 QTRT1-207ENST00000589488 1571 ntTSL 518.21■□□□□ 0.511e-7■■□□□ 12.9
PRPF8Q6P2Q9 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.371e-7■■□□□ 12.9
Retrieved 100 of 73,762 protein–RNA pairs in 737.4 ms