RNA–Protein interactions for RNA: ENST00000446007.5

AP4M1-211, Transcript of adaptor related protein complex 4 subunit mu 1, humanhuman

TSL 3

Gene AP4M1, Length 960 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1-211ENST00000446007 NISCHQ9Y2I1 1504 aa27.62■■■□□ 2.01
AP4M1-211ENST00000446007 CCDC180Q9P1Z9 1646 aa24.6■■□□□ 1.53
AP4M1-211ENST00000446007 ABCC9O60706 1549 aa24.11■■□□□ 1.45
AP4M1-211ENST00000446007 RB1CC1Q8TDY2 1594 aa23.06■■□□□ 1.28
AP4M1-211ENST00000446007 ZCCHC6Q5VYS8 1495 aaKnown RBP23.05■■□□□ 1.28
AP4M1-211ENST00000446007 NACADO15069 1562 aa23.02■■□□□ 1.28
AP4M1-211ENST00000446007 UNC13AQ9UPW8 1703 aa22.93■■□□□ 1.26
AP4M1-211ENST00000446007 MYO15BQ96JP2 1530 aa22.86■■□□□ 1.25
AP4M1-211ENST00000446007 DCAF8L2P0C7V8 631 aa22.81■■□□□ 1.24
AP4M1-211ENST00000446007 DCAF1Q9Y4B6 1507 aa22.78■■□□□ 1.24
AP4M1-211ENST00000446007 BICRAQ9NZM4 1560 aa22.65■■□□□ 1.22
AP4M1-211ENST00000446007 SCRIBQ14160 1630 aa22.5■■□□□ 1.19
AP4M1-211ENST00000446007 PABPN1Q86U42 306 aaKnown RBP eCLIP22.46■■□□□ 1.19
AP4M1-211ENST00000446007 DNAJC5BQ9UF47 199 aa22.3■■□□□ 1.16
AP4M1-211ENST00000446007 SHROOM4Q9ULL8 1493 aa22.04■■□□□ 1.12
AP4M1-211ENST00000446007 EIF4G1Q04637 1599 aaKnown RBP21.91■■□□□ 1.1
AP4M1-211ENST00000446007 CC2D2AQ9P2K1 1620 aa21.86■■□□□ 1.09
AP4M1-211ENST00000446007 CECR2Q9BXF3 1484 aa21.64■■□□□ 1.06
AP4M1-211ENST00000446007 SMARCA4P51532 1647 aa21.51■■□□□ 1.03
AP4M1-211ENST00000446007 MROH2BQ7Z745 1585 aa21.39■■□□□ 1.01
AP4M1-211ENST00000446007 ATAD2BQ9ULI0 1458 aa21.33■■□□□ 1.01
AP4M1-211ENST00000446007 BAZ1AQ9NRL2 1556 aaPredicted RBP21.32■■□□□ 1
AP4M1-211ENST00000446007 PEG3Q9GZU2 1588 aa21.27■□□□□ 0.99
AP4M1-211ENST00000446007 NCAPD3P42695 1498 aa21.26■□□□□ 0.99
AP4M1-211ENST00000446007 HMGXB3Q12766 1538 aa21.19■□□□□ 0.98
AP4M1-211ENST00000446007 SMARCA2P51531 1590 aa21.19■□□□□ 0.98
AP4M1-211ENST00000446007 WIZO95785 1651 aa21.19■□□□□ 0.98
AP4M1-211ENST00000446007 BAZ1BQ9UIG0 1483 aaKnown RBP21.07■□□□□ 0.96
AP4M1-211ENST00000446007 RSF1Q96T23 1441 aaPredicted RBP21.03■□□□□ 0.96
AP4M1-211ENST00000446007 NESP48681 1621 aa20.96■□□□□ 0.95
AP4M1-211ENST00000446007 TOP2AP11388 1531 aaKnown RBP20.83■□□□□ 0.93
AP4M1-211ENST00000446007 KIF21AQ7Z4S6 1674 aa20.76■□□□□ 0.91
AP4M1-211ENST00000446007 LAMC3Q9Y6N6 1575 aa20.72■□□□□ 0.91
AP4M1-211ENST00000446007 THOC2Q8NI27 1593 aaKnown RBP20.68■□□□□ 0.9
AP4M1-211ENST00000446007 CCDC88BA6NC98 1476 aa20.59■□□□□ 0.89
AP4M1-211ENST00000446007 ERCC6Q03468 1493 aa20.59■□□□□ 0.89
AP4M1-211ENST00000446007 CADPSQ9ULU8 1353 aa20.59■□□□□ 0.89
AP4M1-211ENST00000446007 PRDM2Q13029 1718 aa20.54■□□□□ 0.88
AP4M1-211ENST00000446007 CFTRP13569 1480 aa20.53■□□□□ 0.88
AP4M1-211ENST00000446007 CUX2O14529 1486 aa20.44■□□□□ 0.86
AP4M1-211ENST00000446007 PDS5BQ9NTI5 1447 aa20.42■□□□□ 0.86
AP4M1-211ENST00000446007 FANCD2Q9BXW9 1451 aa20.42■□□□□ 0.86
AP4M1-211ENST00000446007 WDR62O43379 1518 aa20.39■□□□□ 0.85
AP4M1-211ENST00000446007 MRC2Q9UBG0 1479 aa20.37■□□□□ 0.85
AP4M1-211ENST00000446007 CEP164Q9UPV0 1460 aa20.36■□□□□ 0.85
AP4M1-211ENST00000446007 URB2Q14146 1524 aaKnown RBP20.35■□□□□ 0.85
AP4M1-211ENST00000446007 SUPT5HO00267 1087 aaKnown RBP20.28■□□□□ 0.84
AP4M1-211ENST00000446007 TOPBP1Q92547 1522 aa20.15■□□□□ 0.82
AP4M1-211ENST00000446007 DNMBPQ6XZF7 1577 aa20.1■□□□□ 0.81
AP4M1-211ENST00000446007 CUX1P39880 1505 aa20.06■□□□□ 0.8
AP4M1-211ENST00000446007 ZNF608Q9ULD9 1512 aaPredicted RBP20.03■□□□□ 0.8
AP4M1-211ENST00000446007 TARBP1Q13395 1621 aaKnown RBP20.02■□□□□ 0.8
AP4M1-211ENST00000446007 POLA1P09884 1462 aaPredicted RBP19.98■□□□□ 0.79
AP4M1-211ENST00000446007 EIF4G3O43432 1585 aaKnown RBP19.94■□□□□ 0.78
AP4M1-211ENST00000446007 ABCC8Q09428 1581 aa19.94■□□□□ 0.78
AP4M1-211ENST00000446007 WDR97A6NE52 1622 aa19.94■□□□□ 0.78
AP4M1-211ENST00000446007 RAD54L2Q9Y4B4 1467 aa19.92■□□□□ 0.78
AP4M1-211ENST00000446007 FGD5Q6ZNL6 1462 aa19.92■□□□□ 0.78
AP4M1-211ENST00000446007 SYNJ1O43426 1573 aa19.91■□□□□ 0.78
AP4M1-211ENST00000446007 IFT140Q96RY7 1462 aa19.9■□□□□ 0.78
AP4M1-211ENST00000446007 DNAJC5Q9H3Z4 198 aa19.86■□□□□ 0.77
AP4M1-211ENST00000446007 BIVM-ERCC5R4GMW8 1640 aa19.86■□□□□ 0.77
AP4M1-211ENST00000446007 AQRO60306 1485 aaKnown RBP eCLIP19.8■□□□□ 0.76
AP4M1-211ENST00000446007 TOP2BQ02880 1626 aa19.8■□□□□ 0.76
AP4M1-211ENST00000446007 CHD1O14646 1710 aa19.76■□□□□ 0.75
AP4M1-211ENST00000446007 SOGA1O94964 1423 aa19.75■□□□□ 0.75
AP4M1-211ENST00000446007 ABCA5Q8WWZ7 1642 aa19.74■□□□□ 0.75
AP4M1-211ENST00000446007 WRNQ14191 1432 aaPredicted RBP eCLIP19.73■□□□□ 0.75
AP4M1-211ENST00000446007 PBRM1Q86U86 1689 aa19.72■□□□□ 0.75
AP4M1-211ENST00000446007 TDRD9Q8NDG6 1382 aaKnown RBP19.71■□□□□ 0.75
AP4M1-211ENST00000446007 ABCA10Q8WWZ4 1543 aa19.68■□□□□ 0.74
AP4M1-211ENST00000446007 SNAPC4Q5SXM2 1469 aa19.63■□□□□ 0.73
AP4M1-211ENST00000446007 GAPVD1Q14C86 1478 aa19.56■□□□□ 0.72
AP4M1-211ENST00000446007 GRIN2BQ13224 1484 aa19.54■□□□□ 0.72
AP4M1-211ENST00000446007 ADAMTS12P58397 1594 aa19.53■□□□□ 0.72
AP4M1-211ENST00000446007 MAGI1Q96QZ7 1491 aaPredicted RBP19.5■□□□□ 0.71
AP4M1-211ENST00000446007 CLASP1Q7Z460 1538 aa19.49■□□□□ 0.71
AP4M1-211ENST00000446007 RIMBP3CA6NJZ7 1639 aa19.48■□□□□ 0.71
AP4M1-211ENST00000446007 RIMBP3BA6NNM3 1639 aa19.48■□□□□ 0.71
AP4M1-211ENST00000446007 RIMBP3Q9UFD9 1639 aa19.48■□□□□ 0.71
AP4M1-211ENST00000446007 SYNJ2O15056 1496 aa19.44■□□□□ 0.7
AP4M1-211ENST00000446007 OSCARQ8IYS5 282 aa19.44■□□□□ 0.7
AP4M1-211ENST00000446007 CEP170Q5SW79 1584 aa19.41■□□□□ 0.7
AP4M1-211ENST00000446007 ERICH3Q5RHP9 1530 aa19.41■□□□□ 0.7
AP4M1-211ENST00000446007 ARHGEF11O15085 1522 aa19.4■□□□□ 0.7
AP4M1-211ENST00000446007 RUSC2Q8N2Y8 1516 aa19.37■□□□□ 0.69
AP4M1-211ENST00000446007 GRIN2AQ12879 1464 aa19.36■□□□□ 0.69
AP4M1-211ENST00000446007 FBLN2P98095 1184 aa19.34■□□□□ 0.69
AP4M1-211ENST00000446007 ERCC6L2Q5T890 1561 aa19.34■□□□□ 0.69
AP4M1-211ENST00000446007 NUP160Q12769 1436 aa19.3■□□□□ 0.68
AP4M1-211ENST00000446007 ARAP1Q96P48 1450 aa19.29■□□□□ 0.68
AP4M1-211ENST00000446007 FHAD1B1AJZ9 1412 aa19.29■□□□□ 0.68
AP4M1-211ENST00000446007 IGF1RP08069 1367 aa19.27■□□□□ 0.68
AP4M1-211ENST00000446007 SHROOM2Q13796 1616 aa19.26■□□□□ 0.67
AP4M1-211ENST00000446007 CHMP7Q8WUX9 453 aaPredicted RBP19.25■□□□□ 0.67
AP4M1-211ENST00000446007 CUL7Q14999 1698 aa19.24■□□□□ 0.67
AP4M1-211ENST00000446007 KIF27Q86VH2 1401 aa19.22■□□□□ 0.67
AP4M1-211ENST00000446007 AEBP2Q6ZN18 517 aaPredicted RBP19.21■□□□□ 0.67
AP4M1-211ENST00000446007 TRIM41Q8WV44 630 aa19.16■□□□□ 0.66
AP4M1-211ENST00000446007 CARMIL1Q5VZK9 1371 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 167.9 ms