RNA–Protein interactions for RNA: ENST00000546158.1

AGPAT3-218, Transcript of 1-acylglycerol-3-phosphate O-acyltransferase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene AGPAT3, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGPAT3-218ENST00000546158 NISCHQ9Y2I1 1504 aa32.53■■■□□ 2.8
AGPAT3-218ENST00000546158 CCDC180Q9P1Z9 1646 aa28.21■■■□□ 2.11
AGPAT3-218ENST00000546158 ZCCHC6Q5VYS8 1495 aaKnown RBP27.37■■□□□ 1.97
AGPAT3-218ENST00000546158 DCAF1Q9Y4B6 1507 aa26.87■■□□□ 1.89
AGPAT3-218ENST00000546158 DCAF8L2P0C7V8 631 aa26.86■■□□□ 1.89
AGPAT3-218ENST00000546158 SHROOM4Q9ULL8 1493 aa26.79■■□□□ 1.88
AGPAT3-218ENST00000546158 ABCC9O60706 1549 aa26.51■■□□□ 1.83
AGPAT3-218ENST00000546158 MYO15BQ96JP2 1530 aa26.44■■□□□ 1.82
AGPAT3-218ENST00000546158 NACADO15069 1562 aa26.22■■□□□ 1.79
AGPAT3-218ENST00000546158 SCRIBQ14160 1630 aa26.03■■□□□ 1.76
AGPAT3-218ENST00000546158 RB1CC1Q8TDY2 1594 aa25.95■■□□□ 1.74
AGPAT3-218ENST00000546158 SUPT5HO00267 1087 aaKnown RBP25.91■■□□□ 1.74
AGPAT3-218ENST00000546158 UNC13AQ9UPW8 1703 aa25.46■■□□□ 1.67
AGPAT3-218ENST00000546158 RSF1Q96T23 1441 aaPredicted RBP25.36■■□□□ 1.65
AGPAT3-218ENST00000546158 CECR2Q9BXF3 1484 aa25.29■■□□□ 1.64
AGPAT3-218ENST00000546158 BICRAQ9NZM4 1560 aa25.18■■□□□ 1.62
AGPAT3-218ENST00000546158 MROH2BQ7Z745 1585 aa25.17■■□□□ 1.62
AGPAT3-218ENST00000546158 BAZ1AQ9NRL2 1556 aaPredicted RBP25.09■■□□□ 1.61
AGPAT3-218ENST00000546158 PABPN1Q86U42 306 aaKnown RBP eCLIP25.08■■□□□ 1.61
AGPAT3-218ENST00000546158 WIZO95785 1651 aa24.98■■□□□ 1.59
AGPAT3-218ENST00000546158 SMARCA4P51532 1647 aa24.95■■□□□ 1.58
AGPAT3-218ENST00000546158 CHIC1Q5VXU3 224 aa24.93■■□□□ 1.58
AGPAT3-218ENST00000546158 TOP2AP11388 1531 aaKnown RBP24.7■■□□□ 1.54
AGPAT3-218ENST00000546158 PEG3Q9GZU2 1588 aa24.61■■□□□ 1.53
AGPAT3-218ENST00000546158 SMARCA2P51531 1590 aa24.49■■□□□ 1.51
AGPAT3-218ENST00000546158 ATAD2BQ9ULI0 1458 aa24.48■■□□□ 1.51
AGPAT3-218ENST00000546158 CCDC88BA6NC98 1476 aa24.47■■□□□ 1.51
AGPAT3-218ENST00000546158 EIF4G1Q04637 1599 aaKnown RBP24.39■■□□□ 1.5
AGPAT3-218ENST00000546158 BAZ1BQ9UIG0 1483 aaKnown RBP24.36■■□□□ 1.49
AGPAT3-218ENST00000546158 TRIM41Q8WV44 630 aa24.32■■□□□ 1.48
AGPAT3-218ENST00000546158 NCAPD3P42695 1498 aa24.22■■□□□ 1.47
AGPAT3-218ENST00000546158 HMGXB3Q12766 1538 aa24.19■■□□□ 1.46
AGPAT3-218ENST00000546158 HRCP23327 699 aa24.09■■□□□ 1.45
AGPAT3-218ENST00000546158 ABCC8Q09428 1581 aa24.06■■□□□ 1.44
AGPAT3-218ENST00000546158 LOC105371045A0A1W2PR82 267 aa24.01■■□□□ 1.43
AGPAT3-218ENST00000546158 CC2D2AQ9P2K1 1620 aa23.98■■□□□ 1.43
AGPAT3-218ENST00000546158 FAM9AQ8IZU1 332 aaPredicted RBP23.92■■□□□ 1.42
AGPAT3-218ENST00000546158 WRNQ14191 1432 aaPredicted RBP eCLIP23.85■■□□□ 1.41
AGPAT3-218ENST00000546158 PCGF6Q9BYE7 350 aa23.79■■□□□ 1.4
AGPAT3-218ENST00000546158 SYNJ1O43426 1573 aa23.76■■□□□ 1.39
AGPAT3-218ENST00000546158 CFTRP13569 1480 aa23.76■■□□□ 1.39
AGPAT3-218ENST00000546158 SOGA1O94964 1423 aa23.67■■□□□ 1.38
AGPAT3-218ENST00000546158 PRDM2Q13029 1718 aa23.63■■□□□ 1.37
AGPAT3-218ENST00000546158 CADPSQ9ULU8 1353 aa23.63■■□□□ 1.37
AGPAT3-218ENST00000546158 EEA1Q15075 1411 aa23.63■■□□□ 1.37
AGPAT3-218ENST00000546158 TOP2BQ02880 1626 aa23.62■■□□□ 1.37
AGPAT3-218ENST00000546158 EHMT2Q96KQ7 1210 aa23.59■■□□□ 1.37
AGPAT3-218ENST00000546158 BIVM-ERCC5R4GMW8 1640 aa23.59■■□□□ 1.37
AGPAT3-218ENST00000546158 RUSC2Q8N2Y8 1516 aa23.57■■□□□ 1.36
AGPAT3-218ENST00000546158 PPARGC1BQ86YN6 1023 aaKnown RBP23.55■■□□□ 1.36
AGPAT3-218ENST00000546158 CSRNP3Q8WYN3 585 aa23.52■■□□□ 1.36
AGPAT3-218ENST00000546158 CUX1P39880 1505 aa23.51■■□□□ 1.35
AGPAT3-218ENST00000546158 FANCD2Q9BXW9 1451 aa23.38■■□□□ 1.33
AGPAT3-218ENST00000546158 NESP48681 1621 aa23.37■■□□□ 1.33
AGPAT3-218ENST00000546158 DNAJC5BQ9UF47 199 aa23.35■■□□□ 1.33
AGPAT3-218ENST00000546158 LAMC3Q9Y6N6 1575 aa23.34■■□□□ 1.33
AGPAT3-218ENST00000546158 GOLGA3Q08378 1498 aa23.33■■□□□ 1.33
AGPAT3-218ENST00000546158 KIF21BO75037 1637 aa23.31■■□□□ 1.32
AGPAT3-218ENST00000546158 TNIKQ9UKE5 1360 aa23.31■■□□□ 1.32
AGPAT3-218ENST00000546158 CEP164Q9UPV0 1460 aa23.3■■□□□ 1.32
AGPAT3-218ENST00000546158 UBTFP17480 764 aaKnown RBP23.25■■□□□ 1.31
AGPAT3-218ENST00000546158 TRIM26Q12899 539 aaPredicted RBP23.23■■□□□ 1.31
AGPAT3-218ENST00000546158 CEP162Q5TB80 1403 aa23.22■■□□□ 1.31
AGPAT3-218ENST00000546158 KIF27Q86VH2 1401 aa23.22■■□□□ 1.31
AGPAT3-218ENST00000546158 FGD5Q6ZNL6 1462 aa23.21■■□□□ 1.31
AGPAT3-218ENST00000546158 DNMBPQ6XZF7 1577 aa23.2■■□□□ 1.3
AGPAT3-218ENST00000546158 PDS5BQ9NTI5 1447 aa23.17■■□□□ 1.3
AGPAT3-218ENST00000546158 RAPGEF2Q9Y4G8 1499 aa23.16■■□□□ 1.3
AGPAT3-218ENST00000546158 TOPBP1Q92547 1522 aa23.15■■□□□ 1.3
AGPAT3-218ENST00000546158 PRXQ9BXM0 1461 aa23.13■■□□□ 1.29
AGPAT3-218ENST00000546158 CUX2O14529 1486 aa23.12■■□□□ 1.29
AGPAT3-218ENST00000546158 ERICH3Q5RHP9 1530 aa23.11■■□□□ 1.29
AGPAT3-218ENST00000546158 URB2Q14146 1524 aaKnown RBP23.07■■□□□ 1.28
AGPAT3-218ENST00000546158 KIF21AQ7Z4S6 1674 aa23.07■■□□□ 1.28
AGPAT3-218ENST00000546158 POLA1P09884 1462 aaPredicted RBP23.06■■□□□ 1.28
AGPAT3-218ENST00000546158 RAD54L2Q9Y4B4 1467 aa23.01■■□□□ 1.27
AGPAT3-218ENST00000546158 IGF1RP08069 1367 aa23■■□□□ 1.27
AGPAT3-218ENST00000546158 ABCA10Q8WWZ4 1543 aa23■■□□□ 1.27
AGPAT3-218ENST00000546158 CLIP1P30622 1438 aa22.98■■□□□ 1.27
AGPAT3-218ENST00000546158 WDR97A6NE52 1622 aa22.89■■□□□ 1.26
AGPAT3-218ENST00000546158 CARMIL1Q5VZK9 1371 aa22.89■■□□□ 1.25
AGPAT3-218ENST00000546158 ZEB1P37275 1124 aaPredicted RBP22.87■■□□□ 1.25
AGPAT3-218ENST00000546158 MRC2Q9UBG0 1479 aa22.85■■□□□ 1.25
AGPAT3-218ENST00000546158 RANGAP1P46060 587 aaPredicted RBP22.83■■□□□ 1.24
AGPAT3-218ENST00000546158 VPS8Q8N3P4 1428 aa22.81■■□□□ 1.24
AGPAT3-218ENST00000546158 ABCA5Q8WWZ7 1642 aa22.79■■□□□ 1.24
AGPAT3-218ENST00000546158 TARBP1Q13395 1621 aaKnown RBP22.78■■□□□ 1.24
AGPAT3-218ENST00000546158 CUL7Q14999 1698 aa22.77■■□□□ 1.24
AGPAT3-218ENST00000546158 TDRD9Q8NDG6 1382 aaKnown RBP22.76■■□□□ 1.23
AGPAT3-218ENST00000546158 GAPVD1Q14C86 1478 aa22.74■■□□□ 1.23
AGPAT3-218ENST00000546158 ARAP1Q96P48 1450 aa22.72■■□□□ 1.23
AGPAT3-218ENST00000546158 WDR62O43379 1518 aa22.71■■□□□ 1.23
AGPAT3-218ENST00000546158 ERCC6Q03468 1493 aa22.69■■□□□ 1.22
AGPAT3-218ENST00000546158 ARHGAP35Q9NRY4 1499 aa22.67■■□□□ 1.22
AGPAT3-218ENST00000546158 TTBK1Q5TCY1 1321 aaPredicted RBP22.64■■□□□ 1.21
AGPAT3-218ENST00000546158 IFT140Q96RY7 1462 aa22.62■■□□□ 1.21
AGPAT3-218ENST00000546158 APLP2Q06481 763 aa22.6■■□□□ 1.21
AGPAT3-218ENST00000546158 THOC2Q8NI27 1593 aaKnown RBP22.59■■□□□ 1.21
AGPAT3-218ENST00000546158 PBRM1Q86U86 1689 aa22.58■■□□□ 1.21
AGPAT3-218ENST00000546158 AQRO60306 1485 aaKnown RBP eCLIP22.57■■□□□ 1.22e-7■■■■□ 22.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms