RNA–Protein interactions for RNA: ENST00000630046.2

SERF2-217, Transcript of small EDRK-rich factor 2, humanhuman

TSL 5 BASIC

Gene SERF2, Length 862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF2-217ENST00000630046 NISCHQ9Y2I1 1504 aa38.98■■■■□ 3.83
SERF2-217ENST00000630046 ABCC9O60706 1549 aa36.36■■■■□ 3.41
SERF2-217ENST00000630046 CCDC180Q9P1Z9 1646 aa35.55■■■■□ 3.28
SERF2-217ENST00000630046 DNAJC5BQ9UF47 199 aa34.83■■■■□ 3.17
SERF2-217ENST00000630046 RB1CC1Q8TDY2 1594 aa34.28■■■■□ 3.08
SERF2-217ENST00000630046 NACADO15069 1562 aa33.78■■■■□ 3
SERF2-217ENST00000630046 PABPN1Q86U42 306 aaKnown RBP eCLIP33.6■■■□□ 2.97
SERF2-217ENST00000630046 UNC13AQ9UPW8 1703 aa33.51■■■□□ 2.96
SERF2-217ENST00000630046 DCAF8L2P0C7V8 631 aa33.26■■■□□ 2.91
SERF2-217ENST00000630046 BICRAQ9NZM4 1560 aa33.22■■■□□ 2.91
SERF2-217ENST00000630046 MYO15BQ96JP2 1530 aa32.97■■■□□ 2.87
SERF2-217ENST00000630046 CECR2Q9BXF3 1484 aa32.88■■■□□ 2.85
SERF2-217ENST00000630046 CC2D2AQ9P2K1 1620 aa32.84■■■□□ 2.85
SERF2-217ENST00000630046 DNAJC5Q9H3Z4 198 aa32.81■■■□□ 2.84
SERF2-217ENST00000630046 SHROOM4Q9ULL8 1493 aa32.8■■■□□ 2.84
SERF2-217ENST00000630046 EIF4G1Q04637 1599 aaKnown RBP32.53■■■□□ 2.8
SERF2-217ENST00000630046 SCRIBQ14160 1630 aa32.24■■■□□ 2.75
SERF2-217ENST00000630046 DCAF1Q9Y4B6 1507 aa32.18■■■□□ 2.74
SERF2-217ENST00000630046 ZCCHC6Q5VYS8 1495 aaKnown RBP32.1■■■□□ 2.73
SERF2-217ENST00000630046 CUX2O14529 1486 aa31.83■■■□□ 2.69
SERF2-217ENST00000630046 ERCC6Q03468 1493 aa31.54■■■□□ 2.64
SERF2-217ENST00000630046 NCAPD3P42695 1498 aa31.12■■■□□ 2.57
SERF2-217ENST00000630046 TRIM41Q8WV44 630 aa30.99■■■□□ 2.55
SERF2-217ENST00000630046 NESP48681 1621 aa30.92■■■□□ 2.54
SERF2-217ENST00000630046 THOC2Q8NI27 1593 aaKnown RBP30.91■■■□□ 2.54
SERF2-217ENST00000630046 HMGXB3Q12766 1538 aa30.88■■■□□ 2.53
SERF2-217ENST00000630046 ATAD2BQ9ULI0 1458 aa30.88■■■□□ 2.53
SERF2-217ENST00000630046 SMARCA2P51531 1590 aa30.83■■■□□ 2.53
SERF2-217ENST00000630046 LAMC3Q9Y6N6 1575 aa30.67■■■□□ 2.5
SERF2-217ENST00000630046 SMARCA4P51532 1647 aa30.67■■■□□ 2.5
SERF2-217ENST00000630046 KIF21AQ7Z4S6 1674 aa30.62■■■□□ 2.49
SERF2-217ENST00000630046 BAZ1BQ9UIG0 1483 aaKnown RBP30.59■■■□□ 2.49
SERF2-217ENST00000630046 PDS5BQ9NTI5 1447 aa30.48■■■□□ 2.47
SERF2-217ENST00000630046 BAZ1AQ9NRL2 1556 aaPredicted RBP30.39■■■□□ 2.46
SERF2-217ENST00000630046 PEG3Q9GZU2 1588 aa30.37■■■□□ 2.45
SERF2-217ENST00000630046 MRC2Q9UBG0 1479 aa30.29■■■□□ 2.44
SERF2-217ENST00000630046 WDR62O43379 1518 aa30.25■■■□□ 2.43
SERF2-217ENST00000630046 OSCARQ8IYS5 282 aa30.12■■■□□ 2.41
SERF2-217ENST00000630046 CADPSQ9ULU8 1353 aa30.12■■■□□ 2.41
SERF2-217ENST00000630046 CEP164Q9UPV0 1460 aa29.99■■■□□ 2.39
SERF2-217ENST00000630046 MROH2BQ7Z745 1585 aa29.98■■■□□ 2.39
SERF2-217ENST00000630046 RIMBP3CA6NJZ7 1639 aa29.91■■■□□ 2.38
SERF2-217ENST00000630046 RIMBP3BA6NNM3 1639 aa29.91■■■□□ 2.38
SERF2-217ENST00000630046 RIMBP3Q9UFD9 1639 aa29.91■■■□□ 2.38
SERF2-217ENST00000630046 FANCD2Q9BXW9 1451 aa29.82■■■□□ 2.36
SERF2-217ENST00000630046 ARHGEF11O15085 1522 aa29.7■■■□□ 2.34
SERF2-217ENST00000630046 WIZO95785 1651 aa29.63■■■□□ 2.33
SERF2-217ENST00000630046 URB2Q14146 1524 aaKnown RBP29.61■■■□□ 2.33
SERF2-217ENST00000630046 CFTRP13569 1480 aa29.59■■■□□ 2.33
SERF2-217ENST00000630046 TRHP20396 242 aaPredicted RBP29.51■■■□□ 2.31
SERF2-217ENST00000630046 CYB5RLQ6IPT4 315 aa29.45■■■□□ 2.31
SERF2-217ENST00000630046 AEBP2Q6ZN18 517 aaPredicted RBP29.43■■■□□ 2.3
SERF2-217ENST00000630046 IFT140Q96RY7 1462 aa29.4■■■□□ 2.3
SERF2-217ENST00000630046 PRDM2Q13029 1718 aa29.4■■■□□ 2.3
SERF2-217ENST00000630046 ZNF608Q9ULD9 1512 aaPredicted RBP29.38■■■□□ 2.29
SERF2-217ENST00000630046 ARAP1Q96P48 1450 aa29.3■■■□□ 2.28
SERF2-217ENST00000630046 EIF4G3O43432 1585 aaKnown RBP29.28■■■□□ 2.28
SERF2-217ENST00000630046 CHD1O14646 1710 aa29.28■■■□□ 2.28
SERF2-217ENST00000630046 TOP2AP11388 1531 aaKnown RBP29.21■■■□□ 2.27
SERF2-217ENST00000630046 RSF1Q96T23 1441 aaPredicted RBP29.2■■■□□ 2.27
SERF2-217ENST00000630046 TOPBP1Q92547 1522 aa29.14■■■□□ 2.25
SERF2-217ENST00000630046 ABCC8Q09428 1581 aa29.07■■■□□ 2.24
SERF2-217ENST00000630046 FBLN2P98095 1184 aa29.02■■■□□ 2.24
SERF2-217ENST00000630046 DNMBPQ6XZF7 1577 aa29■■■□□ 2.23
SERF2-217ENST00000630046 AQRO60306 1485 aaKnown RBP eCLIP28.97■■■□□ 2.234e-9■■■■■ 47.1
SERF2-217ENST00000630046 TARBP1Q13395 1621 aaKnown RBP28.97■■■□□ 2.23
SERF2-217ENST00000630046 CLASP1Q7Z460 1538 aa28.85■■■□□ 2.21
SERF2-217ENST00000630046 SYNJ1O43426 1573 aa28.81■■■□□ 2.2
SERF2-217ENST00000630046 CCDC88BA6NC98 1476 aa28.81■■■□□ 2.2
SERF2-217ENST00000630046 POLA1P09884 1462 aaPredicted RBP28.77■■■□□ 2.2
SERF2-217ENST00000630046 SNAPC4Q5SXM2 1469 aa28.72■■■□□ 2.19
SERF2-217ENST00000630046 WDR97A6NE52 1622 aa28.71■■■□□ 2.19
SERF2-217ENST00000630046 CHMP7Q8WUX9 453 aaPredicted RBP28.65■■■□□ 2.18
SERF2-217ENST00000630046 TDRD9Q8NDG6 1382 aaKnown RBP28.64■■■□□ 2.18
SERF2-217ENST00000630046 MAGI1Q96QZ7 1491 aaPredicted RBP28.64■■■□□ 2.17
SERF2-217ENST00000630046 RAD54L2Q9Y4B4 1467 aa28.64■■■□□ 2.17
SERF2-217ENST00000630046 GAPVD1Q14C86 1478 aa28.61■■■□□ 2.17
SERF2-217ENST00000630046 SOGA1O94964 1423 aa28.6■■■□□ 2.17
SERF2-217ENST00000630046 SYNJ2O15056 1496 aa28.54■■■□□ 2.16
SERF2-217ENST00000630046 GRIN2BQ13224 1484 aa28.52■■■□□ 2.16
SERF2-217ENST00000630046 FGD5Q6ZNL6 1462 aa28.46■■■□□ 2.15
SERF2-217ENST00000630046 PBRM1Q86U86 1689 aa28.42■■■□□ 2.14
SERF2-217ENST00000630046 KIF13AQ9H1H9 1805 aa28.33■■■□□ 2.13
SERF2-217ENST00000630046 ERCC6L2Q5T890 1561 aa28.26■■■□□ 2.11
SERF2-217ENST00000630046 CUX1P39880 1505 aa28.25■■■□□ 2.11
SERF2-217ENST00000630046 CEP170Q5SW79 1584 aa28.2■■■□□ 2.1
SERF2-217ENST00000630046 ILDR1Q86SU0 546 aaPredicted RBP28.18■■■□□ 2.1
SERF2-217ENST00000630046 ABCA5Q8WWZ7 1642 aa28.17■■■□□ 2.1
SERF2-217ENST00000630046 GRIN2AQ12879 1464 aa28.15■■■□□ 2.1
SERF2-217ENST00000630046 SHROOM2Q13796 1616 aa28.11■■■□□ 2.09
SERF2-217ENST00000630046 ABCA10Q8WWZ4 1543 aa28.08■■■□□ 2.09
SERF2-217ENST00000630046 NUP160Q12769 1436 aa28.06■■■□□ 2.08
SERF2-217ENST00000630046 ADAMTS12P58397 1594 aa28.04■■■□□ 2.08
SERF2-217ENST00000630046 KDM6BO15054 1643 aa27.98■■■□□ 2.07
SERF2-217ENST00000630046 ABCC10Q5T3U5 1492 aa27.97■■■□□ 2.07
SERF2-217ENST00000630046 KDM4FA0A1W2PPD8 638 aa27.97■■■□□ 2.07
SERF2-217ENST00000630046 FAM69CQ0P6D2 419 aa27.95■■■□□ 2.06
SERF2-217ENST00000630046 DIP2BQ9P265 1576 aa27.92■■■□□ 2.06
SERF2-217ENST00000630046 MAPKBP1O60336 1514 aa27.91■■■□□ 2.06
SERF2-217ENST00000630046 FHAD1B1AJZ9 1412 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms