RNA–Protein interactions for RNA: ENST00000496580.1

LRP8-211, Transcript of LDL receptor related protein 8, humanhuman

TSL 2

Gene LRP8, Length 507 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-211ENST00000496580 NISCHQ9Y2I1 1504 aa28.67■■■□□ 2.18
LRP8-211ENST00000496580 ABCC9O60706 1549 aa26.37■■□□□ 1.81
LRP8-211ENST00000496580 CCDC180Q9P1Z9 1646 aa25.91■■□□□ 1.74
LRP8-211ENST00000496580 DNAJC5BQ9UF47 199 aa25.12■■□□□ 1.61
LRP8-211ENST00000496580 RB1CC1Q8TDY2 1594 aa24.85■■□□□ 1.57
LRP8-211ENST00000496580 NACADO15069 1562 aa24.56■■□□□ 1.52
LRP8-211ENST00000496580 PABPN1Q86U42 306 aaKnown RBP eCLIP24.47■■□□□ 1.51
LRP8-211ENST00000496580 UNC13AQ9UPW8 1703 aa24.38■■□□□ 1.49
LRP8-211ENST00000496580 DCAF8L2P0C7V8 631 aa24.36■■□□□ 1.49
LRP8-211ENST00000496580 BICRAQ9NZM4 1560 aa24.21■■□□□ 1.47
LRP8-211ENST00000496580 MYO15BQ96JP2 1530 aa24.05■■□□□ 1.44
LRP8-211ENST00000496580 CC2D2AQ9P2K1 1620 aa23.79■■□□□ 1.4
LRP8-211ENST00000496580 CECR2Q9BXF3 1484 aa23.76■■□□□ 1.39
LRP8-211ENST00000496580 SHROOM4Q9ULL8 1493 aa23.73■■□□□ 1.39
LRP8-211ENST00000496580 ZCCHC6Q5VYS8 1495 aaKnown RBP23.69■■□□□ 1.38
LRP8-211ENST00000496580 SCRIBQ14160 1630 aa23.65■■□□□ 1.38
LRP8-211ENST00000496580 EIF4G1Q04637 1599 aaKnown RBP23.63■■□□□ 1.37
LRP8-211ENST00000496580 DCAF1Q9Y4B6 1507 aa23.61■■□□□ 1.37
LRP8-211ENST00000496580 DNAJC5Q9H3Z4 198 aa23.28■■□□□ 1.32
LRP8-211ENST00000496580 CUX2O14529 1486 aa22.84■■□□□ 1.25
LRP8-211ENST00000496580 ERCC6Q03468 1493 aa22.74■■□□□ 1.23
LRP8-211ENST00000496580 NCAPD3P42695 1498 aa22.68■■□□□ 1.22
LRP8-211ENST00000496580 ATAD2BQ9ULI0 1458 aa22.6■■□□□ 1.21
LRP8-211ENST00000496580 NESP48681 1621 aa22.56■■□□□ 1.2
LRP8-211ENST00000496580 HMGXB3Q12766 1538 aa22.5■■□□□ 1.19
LRP8-211ENST00000496580 SMARCA4P51532 1647 aa22.49■■□□□ 1.19
LRP8-211ENST00000496580 SMARCA2P51531 1590 aa22.46■■□□□ 1.19
LRP8-211ENST00000496580 THOC2Q8NI27 1593 aaKnown RBP22.41■■□□□ 1.18
LRP8-211ENST00000496580 BAZ1BQ9UIG0 1483 aaKnown RBP22.34■■□□□ 1.17
LRP8-211ENST00000496580 BAZ1AQ9NRL2 1556 aaPredicted RBP22.27■■□□□ 1.16
LRP8-211ENST00000496580 LAMC3Q9Y6N6 1575 aa22.25■■□□□ 1.15
LRP8-211ENST00000496580 KIF21AQ7Z4S6 1674 aa22.25■■□□□ 1.15
LRP8-211ENST00000496580 PEG3Q9GZU2 1588 aa22.23■■□□□ 1.15
LRP8-211ENST00000496580 TRIM41Q8WV44 630 aa22.15■■□□□ 1.14
LRP8-211ENST00000496580 MROH2BQ7Z745 1585 aa22.12■■□□□ 1.13
LRP8-211ENST00000496580 PDS5BQ9NTI5 1447 aa22.11■■□□□ 1.13
LRP8-211ENST00000496580 MRC2Q9UBG0 1479 aa21.99■■□□□ 1.11
LRP8-211ENST00000496580 CADPSQ9ULU8 1353 aa21.97■■□□□ 1.11
LRP8-211ENST00000496580 WDR62O43379 1518 aa21.96■■□□□ 1.11
LRP8-211ENST00000496580 WIZO95785 1651 aa21.86■■□□□ 1.09
LRP8-211ENST00000496580 CEP164Q9UPV0 1460 aa21.82■■□□□ 1.08
LRP8-211ENST00000496580 FANCD2Q9BXW9 1451 aa21.76■■□□□ 1.07
LRP8-211ENST00000496580 OSCARQ8IYS5 282 aa21.67■■□□□ 1.06
LRP8-211ENST00000496580 CFTRP13569 1480 aa21.64■■□□□ 1.06
LRP8-211ENST00000496580 URB2Q14146 1524 aaKnown RBP21.64■■□□□ 1.05
LRP8-211ENST00000496580 RIMBP3CA6NJZ7 1639 aa21.55■■□□□ 1.04
LRP8-211ENST00000496580 RIMBP3BA6NNM3 1639 aa21.55■■□□□ 1.04
LRP8-211ENST00000496580 RIMBP3Q9UFD9 1639 aa21.55■■□□□ 1.04
LRP8-211ENST00000496580 TOP2AP11388 1531 aaKnown RBP21.51■■□□□ 1.03
LRP8-211ENST00000496580 RSF1Q96T23 1441 aaPredicted RBP21.47■■□□□ 1.03
LRP8-211ENST00000496580 ZNF608Q9ULD9 1512 aaPredicted RBP21.45■■□□□ 1.02
LRP8-211ENST00000496580 PRDM2Q13029 1718 aa21.43■■□□□ 1.02
LRP8-211ENST00000496580 ARHGEF11O15085 1522 aa21.42■■□□□ 1.02
LRP8-211ENST00000496580 IFT140Q96RY7 1462 aa21.38■■□□□ 1.01
LRP8-211ENST00000496580 EIF4G3O43432 1585 aaKnown RBP21.31■■□□□ 1
LRP8-211ENST00000496580 TOPBP1Q92547 1522 aa21.31■■□□□ 1
LRP8-211ENST00000496580 CCDC88BA6NC98 1476 aa21.27■■□□□ 1
LRP8-211ENST00000496580 CHD1O14646 1710 aa21.24■□□□□ 0.99
LRP8-211ENST00000496580 CYB5RLQ6IPT4 315 aa21.24■□□□□ 0.99
LRP8-211ENST00000496580 ARAP1Q96P48 1450 aa21.2■□□□□ 0.98
LRP8-211ENST00000496580 DNMBPQ6XZF7 1577 aa21.19■□□□□ 0.98
LRP8-211ENST00000496580 AQRO60306 1485 aaKnown RBP eCLIP21.18■□□□□ 0.98
LRP8-211ENST00000496580 TARBP1Q13395 1621 aaKnown RBP21.17■□□□□ 0.98
LRP8-211ENST00000496580 ABCC8Q09428 1581 aa21.14■□□□□ 0.98
LRP8-211ENST00000496580 TRHP20396 242 aaPredicted RBP21.14■□□□□ 0.97
LRP8-211ENST00000496580 FBLN2P98095 1184 aa21.08■□□□□ 0.97
LRP8-211ENST00000496580 POLA1P09884 1462 aaPredicted RBP21.07■□□□□ 0.96
LRP8-211ENST00000496580 RAD54L2Q9Y4B4 1467 aa21.02■□□□□ 0.96
LRP8-211ENST00000496580 CLASP1Q7Z460 1538 aa20.97■□□□□ 0.95
LRP8-211ENST00000496580 TDRD9Q8NDG6 1382 aaKnown RBP20.97■□□□□ 0.95
LRP8-211ENST00000496580 SNAPC4Q5SXM2 1469 aa20.96■□□□□ 0.95
LRP8-211ENST00000496580 SOGA1O94964 1423 aa20.93■□□□□ 0.94
LRP8-211ENST00000496580 FGD5Q6ZNL6 1462 aa20.88■□□□□ 0.93
LRP8-211ENST00000496580 SYNJ1O43426 1573 aa20.88■□□□□ 0.93
LRP8-211ENST00000496580 WDR97A6NE52 1622 aa20.86■□□□□ 0.93
LRP8-211ENST00000496580 MAGI1Q96QZ7 1491 aaPredicted RBP20.83■□□□□ 0.93
LRP8-211ENST00000496580 CHMP7Q8WUX9 453 aaPredicted RBP20.83■□□□□ 0.93
LRP8-211ENST00000496580 CUX1P39880 1505 aa20.81■□□□□ 0.92
LRP8-211ENST00000496580 AEBP2Q6ZN18 517 aaPredicted RBP20.8■□□□□ 0.92
LRP8-211ENST00000496580 GRIN2BQ13224 1484 aa20.8■□□□□ 0.92
LRP8-211ENST00000496580 SYNJ2O15056 1496 aa20.78■□□□□ 0.92
LRP8-211ENST00000496580 PBRM1Q86U86 1689 aa20.76■□□□□ 0.91
LRP8-211ENST00000496580 GAPVD1Q14C86 1478 aa20.75■□□□□ 0.91
LRP8-211ENST00000496580 ERCC6L2Q5T890 1561 aa20.67■□□□□ 0.9
LRP8-211ENST00000496580 ABCA5Q8WWZ7 1642 aa20.64■□□□□ 0.9
LRP8-211ENST00000496580 ABCA10Q8WWZ4 1543 aa20.59■□□□□ 0.89
LRP8-211ENST00000496580 GRIN2AQ12879 1464 aa20.56■□□□□ 0.88
LRP8-211ENST00000496580 CEP170Q5SW79 1584 aa20.55■□□□□ 0.88
LRP8-211ENST00000496580 ADAMTS12P58397 1594 aa20.53■□□□□ 0.88
LRP8-211ENST00000496580 NUP160Q12769 1436 aa20.49■□□□□ 0.87
LRP8-211ENST00000496580 SHROOM2Q13796 1616 aa20.47■□□□□ 0.87
LRP8-211ENST00000496580 KIF13AQ9H1H9 1805 aa20.46■□□□□ 0.87
LRP8-211ENST00000496580 WRNQ14191 1432 aaPredicted RBP eCLIP20.39■□□□□ 0.85
LRP8-211ENST00000496580 FHAD1B1AJZ9 1412 aa20.38■□□□□ 0.85
LRP8-211ENST00000496580 BIVM-ERCC5R4GMW8 1640 aa20.36■□□□□ 0.85
LRP8-211ENST00000496580 TOP2BQ02880 1626 aa20.34■□□□□ 0.85
LRP8-211ENST00000496580 PRG4Q92954 1404 aaPredicted RBP20.33■□□□□ 0.84
LRP8-211ENST00000496580 ERICH3Q5RHP9 1530 aa20.31■□□□□ 0.84
LRP8-211ENST00000496580 ABCC10Q5T3U5 1492 aa20.25■□□□□ 0.83
LRP8-211ENST00000496580 RUSC2Q8N2Y8 1516 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms