RNA–Protein interactions for RNA: ENST00000339624.9

SERF2-202, Transcript of small EDRK-rich factor 2, humanhuman

TSL 2 BASIC

Gene SERF2, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF2-202ENST00000339624 NISCHQ9Y2I1 1504 aa27.67■■■□□ 2.02
SERF2-202ENST00000339624 ABCC9O60706 1549 aa25.24■■□□□ 1.63
SERF2-202ENST00000339624 CCDC180Q9P1Z9 1646 aa25.01■■□□□ 1.59
SERF2-202ENST00000339624 DNAJC5BQ9UF47 199 aa23.96■■□□□ 1.43
SERF2-202ENST00000339624 RB1CC1Q8TDY2 1594 aa23.95■■□□□ 1.43
SERF2-202ENST00000339624 NACADO15069 1562 aa23.73■■□□□ 1.39
SERF2-202ENST00000339624 PABPN1Q86U42 306 aaKnown RBP eCLIP23.43■■□□□ 1.34
SERF2-202ENST00000339624 DCAF8L2P0C7V8 631 aa23.41■■□□□ 1.34
SERF2-202ENST00000339624 UNC13AQ9UPW8 1703 aa23.36■■□□□ 1.33
SERF2-202ENST00000339624 MYO15BQ96JP2 1530 aa23.34■■□□□ 1.33
SERF2-202ENST00000339624 BICRAQ9NZM4 1560 aa23.23■■□□□ 1.31
SERF2-202ENST00000339624 SHROOM4Q9ULL8 1493 aa23■■□□□ 1.27
SERF2-202ENST00000339624 DCAF1Q9Y4B6 1507 aa22.89■■□□□ 1.26
SERF2-202ENST00000339624 ZCCHC6Q5VYS8 1495 aaKnown RBP22.85■■□□□ 1.25
SERF2-202ENST00000339624 CC2D2AQ9P2K1 1620 aa22.82■■□□□ 1.24
SERF2-202ENST00000339624 CECR2Q9BXF3 1484 aa22.81■■□□□ 1.24
SERF2-202ENST00000339624 EIF4G1Q04637 1599 aaKnown RBP22.7■■□□□ 1.22
SERF2-202ENST00000339624 SCRIBQ14160 1630 aa22.68■■□□□ 1.22
SERF2-202ENST00000339624 DNAJC5Q9H3Z4 198 aa22.33■■□□□ 1.17
SERF2-202ENST00000339624 CUX2O14529 1486 aa21.99■■□□□ 1.11
SERF2-202ENST00000339624 NCAPD3P42695 1498 aa21.9■■□□□ 1.1
SERF2-202ENST00000339624 ERCC6Q03468 1493 aa21.86■■□□□ 1.09
SERF2-202ENST00000339624 ATAD2BQ9ULI0 1458 aa21.76■■□□□ 1.07
SERF2-202ENST00000339624 HMGXB3Q12766 1538 aa21.71■■□□□ 1.07
SERF2-202ENST00000339624 SMARCA2P51531 1590 aa21.71■■□□□ 1.07
SERF2-202ENST00000339624 SMARCA4P51532 1647 aa21.65■■□□□ 1.06
SERF2-202ENST00000339624 NESP48681 1621 aa21.58■■□□□ 1.04
SERF2-202ENST00000339624 BAZ1BQ9UIG0 1483 aaKnown RBP21.52■■□□□ 1.04
SERF2-202ENST00000339624 BAZ1AQ9NRL2 1556 aaPredicted RBP21.52■■□□□ 1.04
SERF2-202ENST00000339624 PEG3Q9GZU2 1588 aa21.48■■□□□ 1.03
SERF2-202ENST00000339624 THOC2Q8NI27 1593 aaKnown RBP21.47■■□□□ 1.03
SERF2-202ENST00000339624 LAMC3Q9Y6N6 1575 aa21.46■■□□□ 1.03
SERF2-202ENST00000339624 PDS5BQ9NTI5 1447 aa21.36■■□□□ 1.01
SERF2-202ENST00000339624 KIF21AQ7Z4S6 1674 aa21.31■■□□□ 1
SERF2-202ENST00000339624 MROH2BQ7Z745 1585 aa21.27■■□□□ 1
SERF2-202ENST00000339624 CADPSQ9ULU8 1353 aa21.21■□□□□ 0.99
SERF2-202ENST00000339624 MRC2Q9UBG0 1479 aa21.16■□□□□ 0.98
SERF2-202ENST00000339624 WDR62O43379 1518 aa21.13■□□□□ 0.97
SERF2-202ENST00000339624 TRIM41Q8WV44 630 aa21.12■□□□□ 0.97
SERF2-202ENST00000339624 CEP164Q9UPV0 1460 aa21.01■□□□□ 0.95
SERF2-202ENST00000339624 WIZO95785 1651 aa20.99■□□□□ 0.95
SERF2-202ENST00000339624 FANCD2Q9BXW9 1451 aa20.94■□□□□ 0.94
SERF2-202ENST00000339624 CFTRP13569 1480 aa20.9■□□□□ 0.94
SERF2-202ENST00000339624 OSCARQ8IYS5 282 aa20.9■□□□□ 0.94
SERF2-202ENST00000339624 URB2Q14146 1524 aaKnown RBP20.78■□□□□ 0.92
SERF2-202ENST00000339624 TOP2AP11388 1531 aaKnown RBP20.75■□□□□ 0.91
SERF2-202ENST00000339624 RSF1Q96T23 1441 aaPredicted RBP20.73■□□□□ 0.91
SERF2-202ENST00000339624 PRDM2Q13029 1718 aa20.66■□□□□ 0.9
SERF2-202ENST00000339624 RIMBP3CA6NJZ7 1639 aa20.63■□□□□ 0.89
SERF2-202ENST00000339624 RIMBP3BA6NNM3 1639 aa20.63■□□□□ 0.89
SERF2-202ENST00000339624 RIMBP3Q9UFD9 1639 aa20.63■□□□□ 0.89
SERF2-202ENST00000339624 IFT140Q96RY7 1462 aa20.62■□□□□ 0.89
SERF2-202ENST00000339624 ZNF608Q9ULD9 1512 aaPredicted RBP20.56■□□□□ 0.88
SERF2-202ENST00000339624 ARHGEF11O15085 1522 aa20.54■□□□□ 0.88
SERF2-202ENST00000339624 ABCC8Q09428 1581 aa20.51■□□□□ 0.87
SERF2-202ENST00000339624 TOPBP1Q92547 1522 aa20.51■□□□□ 0.87
SERF2-202ENST00000339624 CCDC88BA6NC98 1476 aa20.5■□□□□ 0.87
SERF2-202ENST00000339624 EIF4G3O43432 1585 aaKnown RBP20.45■□□□□ 0.86
SERF2-202ENST00000339624 DNMBPQ6XZF7 1577 aa20.42■□□□□ 0.86
SERF2-202ENST00000339624 CYB5RLQ6IPT4 315 aa20.39■□□□□ 0.85
SERF2-202ENST00000339624 TARBP1Q13395 1621 aaKnown RBP20.35■□□□□ 0.85
SERF2-202ENST00000339624 CHD1O14646 1710 aa20.35■□□□□ 0.85
SERF2-202ENST00000339624 AQRO60306 1485 aaKnown RBP eCLIP20.34■□□□□ 0.854e-9■■■■■ 47.1
SERF2-202ENST00000339624 ARAP1Q96P48 1450 aa20.3■□□□□ 0.84
SERF2-202ENST00000339624 POLA1P09884 1462 aaPredicted RBP20.28■□□□□ 0.84
SERF2-202ENST00000339624 TRHP20396 242 aaPredicted RBP20.27■□□□□ 0.84
SERF2-202ENST00000339624 FBLN2P98095 1184 aa20.26■□□□□ 0.83
SERF2-202ENST00000339624 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
SERF2-202ENST00000339624 SOGA1O94964 1423 aa20.19■□□□□ 0.82
SERF2-202ENST00000339624 RAD54L2Q9Y4B4 1467 aa20.17■□□□□ 0.82
SERF2-202ENST00000339624 TDRD9Q8NDG6 1382 aaKnown RBP20.15■□□□□ 0.82
SERF2-202ENST00000339624 CLASP1Q7Z460 1538 aa20.14■□□□□ 0.81
SERF2-202ENST00000339624 SNAPC4Q5SXM2 1469 aa20.12■□□□□ 0.81
SERF2-202ENST00000339624 SYNJ1O43426 1573 aa20.12■□□□□ 0.81
SERF2-202ENST00000339624 MAGI1Q96QZ7 1491 aaPredicted RBP20.11■□□□□ 0.81
SERF2-202ENST00000339624 CHMP7Q8WUX9 453 aaPredicted RBP20.1■□□□□ 0.81
SERF2-202ENST00000339624 FGD5Q6ZNL6 1462 aa20.09■□□□□ 0.81
SERF2-202ENST00000339624 GRIN2BQ13224 1484 aa20.07■□□□□ 0.8
SERF2-202ENST00000339624 SYNJ2O15056 1496 aa20.05■□□□□ 0.8
SERF2-202ENST00000339624 CUX1P39880 1505 aa20.02■□□□□ 0.79
SERF2-202ENST00000339624 AEBP2Q6ZN18 517 aaPredicted RBP19.95■□□□□ 0.78
SERF2-202ENST00000339624 GAPVD1Q14C86 1478 aa19.94■□□□□ 0.78
SERF2-202ENST00000339624 PBRM1Q86U86 1689 aa19.93■□□□□ 0.78
SERF2-202ENST00000339624 ABCA10Q8WWZ4 1543 aa19.88■□□□□ 0.77
SERF2-202ENST00000339624 ABCA5Q8WWZ7 1642 aa19.86■□□□□ 0.77
SERF2-202ENST00000339624 GRIN2AQ12879 1464 aa19.79■□□□□ 0.76
SERF2-202ENST00000339624 NUP160Q12769 1436 aa19.76■□□□□ 0.75
SERF2-202ENST00000339624 WRNQ14191 1432 aaPredicted RBP eCLIP19.74■□□□□ 0.75
SERF2-202ENST00000339624 CEP170Q5SW79 1584 aa19.74■□□□□ 0.75
SERF2-202ENST00000339624 ERCC6L2Q5T890 1561 aa19.74■□□□□ 0.75
SERF2-202ENST00000339624 ADAMTS12P58397 1594 aa19.73■□□□□ 0.75
SERF2-202ENST00000339624 SHROOM2Q13796 1616 aa19.71■□□□□ 0.75
SERF2-202ENST00000339624 FHAD1B1AJZ9 1412 aa19.68■□□□□ 0.74
SERF2-202ENST00000339624 ERICH3Q5RHP9 1530 aa19.64■□□□□ 0.73
SERF2-202ENST00000339624 TOP2BQ02880 1626 aa19.64■□□□□ 0.73
SERF2-202ENST00000339624 BIVM-ERCC5R4GMW8 1640 aa19.63■□□□□ 0.73
SERF2-202ENST00000339624 KIF13AQ9H1H9 1805 aa19.6■□□□□ 0.73
SERF2-202ENST00000339624 PRG4Q92954 1404 aaPredicted RBP19.57■□□□□ 0.72
SERF2-202ENST00000339624 JPH4Q96JJ6 628 aa19.54■□□□□ 0.72
SERF2-202ENST00000339624 ABCC10Q5T3U5 1492 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms