RNA–Protein interactions for RNA: ENST00000559503.1

PCK2-209, Transcript of phosphoenolpyruvate carboxykinase 2, mitochondrial, humanhuman

TSL 5

Gene PCK2, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCK2-209ENST00000559503 NISCHQ9Y2I1 1504 aa25.31■■□□□ 1.64
PCK2-209ENST00000559503 ABCC9O60706 1549 aa23.64■■□□□ 1.38
PCK2-209ENST00000559503 DNAJC5BQ9UF47 199 aa22.89■■□□□ 1.25
PCK2-209ENST00000559503 CCDC180Q9P1Z9 1646 aa22.71■■□□□ 1.23
PCK2-209ENST00000559503 RB1CC1Q8TDY2 1594 aa22.06■■□□□ 1.12
PCK2-209ENST00000559503 PABPN1Q86U42 306 aaKnown RBP eCLIP21.85■■□□□ 1.09
PCK2-209ENST00000559503 UNC13AQ9UPW8 1703 aa21.65■■□□□ 1.06
PCK2-209ENST00000559503 DNAJC5Q9H3Z4 198 aa21.64■■□□□ 1.05
PCK2-209ENST00000559503 NACADO15069 1562 aa21.64■■□□□ 1.05
PCK2-209ENST00000559503 DCAF8L2P0C7V8 631 aa21.46■■□□□ 1.03
PCK2-209ENST00000559503 BICRAQ9NZM4 1560 aa21.44■■□□□ 1.02
PCK2-209ENST00000559503 CECR2Q9BXF3 1484 aa21.35■■□□□ 1.01
PCK2-209ENST00000559503 CC2D2AQ9P2K1 1620 aa21.29■■□□□ 1
PCK2-209ENST00000559503 MYO15BQ96JP2 1530 aa21.16■□□□□ 0.98
PCK2-209ENST00000559503 ZCCHC6Q5VYS8 1495 aaKnown RBP21.11■□□□□ 0.97
PCK2-209ENST00000559503 DCAF1Q9Y4B6 1507 aa21.05■□□□□ 0.96
PCK2-209ENST00000559503 EIF4G1Q04637 1599 aaKnown RBP21.01■□□□□ 0.95
PCK2-209ENST00000559503 SHROOM4Q9ULL8 1493 aa20.97■□□□□ 0.95
PCK2-209ENST00000559503 SCRIBQ14160 1630 aa20.73■□□□□ 0.91
PCK2-209ENST00000559503 CUX2O14529 1486 aa20.67■□□□□ 0.9
PCK2-209ENST00000559503 ERCC6Q03468 1493 aa20.5■□□□□ 0.87
PCK2-209ENST00000559503 TRIM41Q8WV44 630 aa20.47■□□□□ 0.87
PCK2-209ENST00000559503 NESP48681 1621 aa20.05■□□□□ 0.8
PCK2-209ENST00000559503 THOC2Q8NI27 1593 aaKnown RBP20.02■□□□□ 0.8
PCK2-209ENST00000559503 NCAPD3P42695 1498 aa19.95■□□□□ 0.78
PCK2-209ENST00000559503 SMARCA2P51531 1590 aa19.91■□□□□ 0.78
PCK2-209ENST00000559503 KIF21AQ7Z4S6 1674 aa19.81■□□□□ 0.76
PCK2-209ENST00000559503 ATAD2BQ9ULI0 1458 aa19.8■□□□□ 0.76
PCK2-209ENST00000559503 HMGXB3Q12766 1538 aa19.78■□□□□ 0.76
PCK2-209ENST00000559503 BAZ1AQ9NRL2 1556 aaPredicted RBP19.71■□□□□ 0.75
PCK2-209ENST00000559503 LAMC3Q9Y6N6 1575 aa19.71■□□□□ 0.75
PCK2-209ENST00000559503 SMARCA4P51532 1647 aa19.62■□□□□ 0.73
PCK2-209ENST00000559503 BAZ1BQ9UIG0 1483 aaKnown RBP19.62■□□□□ 0.73
PCK2-209ENST00000559503 PDS5BQ9NTI5 1447 aa19.6■□□□□ 0.73
PCK2-209ENST00000559503 OSCARQ8IYS5 282 aa19.56■□□□□ 0.72
PCK2-209ENST00000559503 MRC2Q9UBG0 1479 aa19.53■□□□□ 0.72
PCK2-209ENST00000559503 RIMBP3CA6NJZ7 1639 aa19.51■□□□□ 0.71
PCK2-209ENST00000559503 RIMBP3BA6NNM3 1639 aa19.51■□□□□ 0.71
PCK2-209ENST00000559503 RIMBP3Q9UFD9 1639 aa19.51■□□□□ 0.71
PCK2-209ENST00000559503 WDR62O43379 1518 aa19.51■□□□□ 0.71
PCK2-209ENST00000559503 PEG3Q9GZU2 1588 aa19.49■□□□□ 0.71
PCK2-209ENST00000559503 AEBP2Q6ZN18 517 aaPredicted RBP19.45■□□□□ 0.7
PCK2-209ENST00000559503 MROH2BQ7Z745 1585 aa19.44■□□□□ 0.7
PCK2-209ENST00000559503 TRHP20396 242 aaPredicted RBP19.35■□□□□ 0.69
PCK2-209ENST00000559503 CADPSQ9ULU8 1353 aa19.32■□□□□ 0.68
PCK2-209ENST00000559503 ARHGEF11O15085 1522 aa19.32■□□□□ 0.68
PCK2-209ENST00000559503 CEP164Q9UPV0 1460 aa19.28■□□□□ 0.68
PCK2-209ENST00000559503 RSF1Q96T23 1441 aaPredicted RBP19.26■□□□□ 0.67
PCK2-209ENST00000559503 CYB5RLQ6IPT4 315 aa19.22■□□□□ 0.67
PCK2-209ENST00000559503 WIZO95785 1651 aa19.2■□□□□ 0.66
PCK2-209ENST00000559503 FANCD2Q9BXW9 1451 aa19.17■□□□□ 0.66
PCK2-209ENST00000559503 TOP2AP11388 1531 aaKnown RBP19.11■□□□□ 0.65
PCK2-209ENST00000559503 URB2Q14146 1524 aaKnown RBP19.07■□□□□ 0.64
PCK2-209ENST00000559503 ARAP1Q96P48 1450 aa19.06■□□□□ 0.64
PCK2-209ENST00000559503 ZNF608Q9ULD9 1512 aaPredicted RBP19■□□□□ 0.63
PCK2-209ENST00000559503 CHD1O14646 1710 aa18.96■□□□□ 0.63
PCK2-209ENST00000559503 CFTRP13569 1480 aa18.92■□□□□ 0.62
PCK2-209ENST00000559503 IFT140Q96RY7 1462 aa18.9■□□□□ 0.62
PCK2-209ENST00000559503 EIF4G3O43432 1585 aaKnown RBP18.89■□□□□ 0.61
PCK2-209ENST00000559503 CCDC88BA6NC98 1476 aa18.82■□□□□ 0.6
PCK2-209ENST00000559503 FBLN2P98095 1184 aa18.81■□□□□ 0.6
PCK2-209ENST00000559503 PRDM2Q13029 1718 aa18.78■□□□□ 0.6
PCK2-209ENST00000559503 ILDR1Q86SU0 546 aaPredicted RBP18.73■□□□□ 0.59
PCK2-209ENST00000559503 SUPT5HO00267 1087 aaKnown RBP18.72■□□□□ 0.59
PCK2-209ENST00000559503 AQRO60306 1485 aaKnown RBP eCLIP18.71■□□□□ 0.594e-7■■■■■ 39.8
PCK2-209ENST00000559503 TOPBP1Q92547 1522 aa18.7■□□□□ 0.58
PCK2-209ENST00000559503 CLASP1Q7Z460 1538 aa18.62■□□□□ 0.57
PCK2-209ENST00000559503 TARBP1Q13395 1621 aaKnown RBP18.61■□□□□ 0.57
PCK2-209ENST00000559503 DNMBPQ6XZF7 1577 aa18.56■□□□□ 0.56
PCK2-209ENST00000559503 SYNJ1O43426 1573 aa18.55■□□□□ 0.56
PCK2-209ENST00000559503 ABCC8Q09428 1581 aa18.53■□□□□ 0.56
PCK2-209ENST00000559503 GAPVD1Q14C86 1478 aa18.51■□□□□ 0.55
PCK2-209ENST00000559503 SNAPC4Q5SXM2 1469 aa18.51■□□□□ 0.55
PCK2-209ENST00000559503 CHMP7Q8WUX9 453 aaPredicted RBP18.46■□□□□ 0.55
PCK2-209ENST00000559503 POLA1P09884 1462 aaPredicted RBP18.46■□□□□ 0.54
PCK2-209ENST00000559503 TDRD9Q8NDG6 1382 aaKnown RBP18.44■□□□□ 0.54
PCK2-209ENST00000559503 RAD54L2Q9Y4B4 1467 aa18.43■□□□□ 0.54
PCK2-209ENST00000559503 KIF13AQ9H1H9 1805 aa18.4■□□□□ 0.54
PCK2-209ENST00000559503 MAGI1Q96QZ7 1491 aaPredicted RBP18.36■□□□□ 0.53
PCK2-209ENST00000559503 SYNJ2O15056 1496 aa18.33■□□□□ 0.53
PCK2-209ENST00000559503 SOGA1O94964 1423 aa18.33■□□□□ 0.53
PCK2-209ENST00000559503 KDM4FA0A1W2PPD8 638 aa18.32■□□□□ 0.52
PCK2-209ENST00000559503 ERCC6L2Q5T890 1561 aa18.31■□□□□ 0.52
PCK2-209ENST00000559503 WDR97A6NE52 1622 aa18.31■□□□□ 0.52
PCK2-209ENST00000559503 GRIN2BQ13224 1484 aa18.28■□□□□ 0.52
PCK2-209ENST00000559503 PBRM1Q86U86 1689 aa18.25■□□□□ 0.51
PCK2-209ENST00000559503 CUX1P39880 1505 aa18.24■□□□□ 0.51
PCK2-209ENST00000559503 FGD5Q6ZNL6 1462 aa18.23■□□□□ 0.51
PCK2-209ENST00000559503 WRNQ14191 1432 aaPredicted RBP eCLIP18.21■□□□□ 0.51
PCK2-209ENST00000559503 KDM6BO15054 1643 aa18.18■□□□□ 0.5
PCK2-209ENST00000559503 CEP170Q5SW79 1584 aa18.17■□□□□ 0.5
PCK2-209ENST00000559503 TOP2BQ02880 1626 aa18.16■□□□□ 0.5
PCK2-209ENST00000559503 BIVM-ERCC5R4GMW8 1640 aa18.16■□□□□ 0.5
PCK2-209ENST00000559503 FAM69CQ0P6D2 419 aa18.14■□□□□ 0.49
PCK2-209ENST00000559503 TSPOAP1O95153 1857 aa18.1■□□□□ 0.49
PCK2-209ENST00000559503 HECW2Q9P2P5 1572 aa18.09■□□□□ 0.49
PCK2-209ENST00000559503 ABCA10Q8WWZ4 1543 aa18.08■□□□□ 0.49
PCK2-209ENST00000559503 ABCC10Q5T3U5 1492 aa18.08■□□□□ 0.49
PCK2-209ENST00000559503 DIP2BQ9P265 1576 aa18.07■□□□□ 0.48
PCK2-209ENST00000559503 GRIN2AQ12879 1464 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms