RNA–Protein interactions for RNA: ENST00000445816.5

SERF2-212, Transcript of small EDRK-rich factor 2, humanhuman

TSL 3

Gene SERF2, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF2-212ENST00000445816 NISCHQ9Y2I1 1504 aa32.35■■■□□ 2.77
SERF2-212ENST00000445816 CCDC180Q9P1Z9 1646 aa28.07■■■□□ 2.08
SERF2-212ENST00000445816 ZCCHC6Q5VYS8 1495 aaKnown RBP27.21■■□□□ 1.95
SERF2-212ENST00000445816 DCAF8L2P0C7V8 631 aa26.75■■□□□ 1.87
SERF2-212ENST00000445816 DCAF1Q9Y4B6 1507 aa26.72■■□□□ 1.87
SERF2-212ENST00000445816 SHROOM4Q9ULL8 1493 aa26.62■■□□□ 1.85
SERF2-212ENST00000445816 ABCC9O60706 1549 aa26.42■■□□□ 1.82
SERF2-212ENST00000445816 MYO15BQ96JP2 1530 aa26.32■■□□□ 1.8
SERF2-212ENST00000445816 NACADO15069 1562 aa26.12■■□□□ 1.77
SERF2-212ENST00000445816 SCRIBQ14160 1630 aa25.9■■□□□ 1.74
SERF2-212ENST00000445816 RB1CC1Q8TDY2 1594 aa25.86■■□□□ 1.73
SERF2-212ENST00000445816 SUPT5HO00267 1087 aaKnown RBP25.73■■□□□ 1.71
SERF2-212ENST00000445816 UNC13AQ9UPW8 1703 aa25.32■■□□□ 1.64
SERF2-212ENST00000445816 RSF1Q96T23 1441 aaPredicted RBP25.2■■□□□ 1.62
SERF2-212ENST00000445816 CECR2Q9BXF3 1484 aa25.13■■□□□ 1.61
SERF2-212ENST00000445816 CHIC1Q5VXU3 224 aa25.11■■□□□ 1.61
SERF2-212ENST00000445816 BICRAQ9NZM4 1560 aa25.05■■□□□ 1.6
SERF2-212ENST00000445816 MROH2BQ7Z745 1585 aa25.01■■□□□ 1.59
SERF2-212ENST00000445816 PABPN1Q86U42 306 aaKnown RBP eCLIP24.99■■□□□ 1.59
SERF2-212ENST00000445816 BAZ1AQ9NRL2 1556 aaPredicted RBP24.97■■□□□ 1.59
SERF2-212ENST00000445816 WIZO95785 1651 aa24.82■■□□□ 1.56
SERF2-212ENST00000445816 SMARCA4P51532 1647 aa24.82■■□□□ 1.56
SERF2-212ENST00000445816 HRCP23327 699 aa24.8■■□□□ 1.56
SERF2-212ENST00000445816 TOP2AP11388 1531 aaKnown RBP24.56■■□□□ 1.52
SERF2-212ENST00000445816 PEG3Q9GZU2 1588 aa24.48■■□□□ 1.51
SERF2-212ENST00000445816 PCGF6Q9BYE7 350 aa24.48■■□□□ 1.51
SERF2-212ENST00000445816 ATAD2BQ9ULI0 1458 aa24.37■■□□□ 1.49
SERF2-212ENST00000445816 SMARCA2P51531 1590 aa24.36■■□□□ 1.49
SERF2-212ENST00000445816 CCDC88BA6NC98 1476 aa24.33■■□□□ 1.49
SERF2-212ENST00000445816 EIF4G1Q04637 1599 aaKnown RBP24.29■■□□□ 1.48
SERF2-212ENST00000445816 BAZ1BQ9UIG0 1483 aaKnown RBP24.26■■□□□ 1.47
SERF2-212ENST00000445816 LOC105371045A0A1W2PR82 267 aa24.21■■□□□ 1.47
SERF2-212ENST00000445816 TRIM41Q8WV44 630 aa24.17■■□□□ 1.46
SERF2-212ENST00000445816 TRIM26Q12899 539 aaPredicted RBP24.15■■□□□ 1.46
SERF2-212ENST00000445816 NCAPD3P42695 1498 aa24.11■■□□□ 1.45
SERF2-212ENST00000445816 HMGXB3Q12766 1538 aa24.08■■□□□ 1.45
SERF2-212ENST00000445816 PPARGC1BQ86YN6 1023 aaKnown RBP23.98■■□□□ 1.43
SERF2-212ENST00000445816 ABCC8Q09428 1581 aa23.9■■□□□ 1.42
SERF2-212ENST00000445816 CC2D2AQ9P2K1 1620 aa23.89■■□□□ 1.41
SERF2-212ENST00000445816 ZEB1P37275 1124 aaPredicted RBP23.88■■□□□ 1.41
SERF2-212ENST00000445816 FAM9AQ8IZU1 332 aaPredicted RBP23.75■■□□□ 1.39
SERF2-212ENST00000445816 WRNQ14191 1432 aaPredicted RBP eCLIP23.72■■□□□ 1.39
SERF2-212ENST00000445816 CFTRP13569 1480 aa23.64■■□□□ 1.38
SERF2-212ENST00000445816 SYNJ1O43426 1573 aa23.59■■□□□ 1.37
SERF2-212ENST00000445816 CADPSQ9ULU8 1353 aa23.53■■□□□ 1.36
SERF2-212ENST00000445816 SOGA1O94964 1423 aa23.5■■□□□ 1.35
SERF2-212ENST00000445816 PRDM2Q13029 1718 aa23.5■■□□□ 1.35
SERF2-212ENST00000445816 EEA1Q15075 1411 aa23.49■■□□□ 1.35
SERF2-212ENST00000445816 TOP2BQ02880 1626 aa23.48■■□□□ 1.35
SERF2-212ENST00000445816 BIVM-ERCC5R4GMW8 1640 aa23.44■■□□□ 1.34
SERF2-212ENST00000445816 EHMT2Q96KQ7 1210 aa23.44■■□□□ 1.34
SERF2-212ENST00000445816 RUSC2Q8N2Y8 1516 aa23.4■■□□□ 1.34
SERF2-212ENST00000445816 CSRNP3Q8WYN3 585 aa23.37■■□□□ 1.33
SERF2-212ENST00000445816 CUX1P39880 1505 aa23.37■■□□□ 1.33
SERF2-212ENST00000445816 FANCD2Q9BXW9 1451 aa23.27■■□□□ 1.32
SERF2-212ENST00000445816 LAMC3Q9Y6N6 1575 aa23.25■■□□□ 1.31
SERF2-212ENST00000445816 NESP48681 1621 aa23.25■■□□□ 1.31
SERF2-212ENST00000445816 DNAJC5BQ9UF47 199 aa23.24■■□□□ 1.31
SERF2-212ENST00000445816 GOLGA3Q08378 1498 aa23.18■■□□□ 1.3
SERF2-212ENST00000445816 CEP164Q9UPV0 1460 aa23.16■■□□□ 1.3
SERF2-212ENST00000445816 KIF21BO75037 1637 aa23.16■■□□□ 1.3
SERF2-212ENST00000445816 TNIKQ9UKE5 1360 aa23.16■■□□□ 1.3
SERF2-212ENST00000445816 UBTFP17480 764 aaKnown RBP23.12■■□□□ 1.29
SERF2-212ENST00000445816 KIF27Q86VH2 1401 aa23.11■■□□□ 1.29
SERF2-212ENST00000445816 PDS5BQ9NTI5 1447 aa23.1■■□□□ 1.29
SERF2-212ENST00000445816 FGD5Q6ZNL6 1462 aa23.09■■□□□ 1.29
SERF2-212ENST00000445816 DNMBPQ6XZF7 1577 aa23.09■■□□□ 1.29
SERF2-212ENST00000445816 PELP1Q8IZL8 1130 aaKnown RBP23.06■■□□□ 1.28
SERF2-212ENST00000445816 CEP162Q5TB80 1403 aa23.05■■□□□ 1.28
SERF2-212ENST00000445816 TOPBP1Q92547 1522 aa23.04■■□□□ 1.28
SERF2-212ENST00000445816 RAPGEF2Q9Y4G8 1499 aa23.01■■□□□ 1.27
SERF2-212ENST00000445816 CCER1Q8TC90 406 aaPredicted RBP23.01■■□□□ 1.27
SERF2-212ENST00000445816 CUX2O14529 1486 aa23■■□□□ 1.27
SERF2-212ENST00000445816 PRXQ9BXM0 1461 aa22.98■■□□□ 1.27
SERF2-212ENST00000445816 ERICH3Q5RHP9 1530 aa22.96■■□□□ 1.27
SERF2-212ENST00000445816 URB2Q14146 1524 aaKnown RBP22.96■■□□□ 1.27
SERF2-212ENST00000445816 KIF21AQ7Z4S6 1674 aa22.95■■□□□ 1.26
SERF2-212ENST00000445816 POLA1P09884 1462 aaPredicted RBP22.95■■□□□ 1.26
SERF2-212ENST00000445816 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.94■■□□□ 1.26
SERF2-212ENST00000445816 RAD54L2Q9Y4B4 1467 aa22.89■■□□□ 1.25
SERF2-212ENST00000445816 SCAF1Q9H7N4 1312 aaKnown RBP22.88■■□□□ 1.25
SERF2-212ENST00000445816 ABCA10Q8WWZ4 1543 aa22.88■■□□□ 1.25
SERF2-212ENST00000445816 IGF1RP08069 1367 aa22.88■■□□□ 1.25
SERF2-212ENST00000445816 CLIP1P30622 1438 aa22.83■■□□□ 1.25
SERF2-212ENST00000445816 CARMIL1Q5VZK9 1371 aa22.77■■□□□ 1.24
SERF2-212ENST00000445816 MRC2Q9UBG0 1479 aa22.77■■□□□ 1.24
SERF2-212ENST00000445816 WDR97A6NE52 1622 aa22.76■■□□□ 1.23
SERF2-212ENST00000445816 ACIN1Q9UKV3 1341 aaKnown RBP22.71■■□□□ 1.23
SERF2-212ENST00000445816 DIEXFQ68CQ4 756 aaKnown RBP22.71■■□□□ 1.23
SERF2-212ENST00000445816 RANGAP1P46060 587 aaPredicted RBP22.7■■□□□ 1.23
SERF2-212ENST00000445816 ABCA5Q8WWZ7 1642 aa22.66■■□□□ 1.22
SERF2-212ENST00000445816 CENPBP07199 599 aaPredicted RBP22.66■■□□□ 1.22
SERF2-212ENST00000445816 TDRD9Q8NDG6 1382 aaKnown RBP22.66■■□□□ 1.22
SERF2-212ENST00000445816 CUL7Q14999 1698 aa22.66■■□□□ 1.22
SERF2-212ENST00000445816 VPS8Q8N3P4 1428 aa22.66■■□□□ 1.22
SERF2-212ENST00000445816 TARBP1Q13395 1621 aaKnown RBP22.65■■□□□ 1.22
SERF2-212ENST00000445816 ERCC6Q03468 1493 aa22.64■■□□□ 1.22
SERF2-212ENST00000445816 GAPVD1Q14C86 1478 aa22.64■■□□□ 1.21
SERF2-212ENST00000445816 WDR62O43379 1518 aa22.63■■□□□ 1.21
SERF2-212ENST00000445816 TTBK1Q5TCY1 1321 aaPredicted RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms