RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 NISCHQ9Y2I1 1504 aa43.43■■■■■ 4.54
MAP1LC3B-207ENST00000565788 CCDC180Q9P1Z9 1646 aa38.88■■■■□ 3.81
MAP1LC3B-207ENST00000565788 ABCC9O60706 1549 aa38.63■■■■□ 3.78
MAP1LC3B-207ENST00000565788 RB1CC1Q8TDY2 1594 aa36.87■■■■□ 3.49
MAP1LC3B-207ENST00000565788 NACADO15069 1562 aa36.67■■■■□ 3.46
MAP1LC3B-207ENST00000565788 DCAF8L2P0C7V8 631 aa36.5■■■■□ 3.43
MAP1LC3B-207ENST00000565788 MYO15BQ96JP2 1530 aa36.24■■■■□ 3.39
MAP1LC3B-207ENST00000565788 UNC13AQ9UPW8 1703 aa36.11■■■■□ 3.37
MAP1LC3B-207ENST00000565788 ZCCHC6Q5VYS8 1495 aaKnown RBP36.06■■■■□ 3.36
MAP1LC3B-207ENST00000565788 DNAJC5BQ9UF47 199 aa36.01■■■■□ 3.36
MAP1LC3B-207ENST00000565788 PABPN1Q86U42 306 aaKnown RBP eCLIP35.99■■■■□ 3.35
MAP1LC3B-207ENST00000565788 DCAF1Q9Y4B6 1507 aa35.88■■■■□ 3.33
MAP1LC3B-207ENST00000565788 BICRAQ9NZM4 1560 aa35.81■■■■□ 3.32
MAP1LC3B-207ENST00000565788 SCRIBQ14160 1630 aa35.46■■■■□ 3.27
MAP1LC3B-207ENST00000565788 SHROOM4Q9ULL8 1493 aa35.31■■■■□ 3.24
MAP1LC3B-207ENST00000565788 CC2D2AQ9P2K1 1620 aa34.92■■■■□ 3.18
MAP1LC3B-207ENST00000565788 EIF4G1Q04637 1599 aaKnown RBP34.91■■■■□ 3.18
MAP1LC3B-207ENST00000565788 CECR2Q9BXF3 1484 aa34.77■■■■□ 3.16
MAP1LC3B-207ENST00000565788 NCAPD3P42695 1498 aa33.84■■■■□ 3.01
MAP1LC3B-207ENST00000565788 SMARCA4P51532 1647 aa33.84■■■■□ 3.01
MAP1LC3B-207ENST00000565788 ATAD2BQ9ULI0 1458 aa33.8■■■■□ 3
MAP1LC3B-207ENST00000565788 SMARCA2P51531 1590 aa33.7■■■□□ 2.99
MAP1LC3B-207ENST00000565788 BAZ1AQ9NRL2 1556 aaPredicted RBP33.69■■■□□ 2.98
MAP1LC3B-207ENST00000565788 HMGXB3Q12766 1538 aa33.63■■■□□ 2.97
MAP1LC3B-207ENST00000565788 PEG3Q9GZU2 1588 aa33.5■■■□□ 2.95
MAP1LC3B-207ENST00000565788 MROH2BQ7Z745 1585 aa33.48■■■□□ 2.95
MAP1LC3B-207ENST00000565788 BAZ1BQ9UIG0 1483 aaKnown RBP33.48■■■□□ 2.95
MAP1LC3B-207ENST00000565788 ERCC6Q03468 1493 aa33.31■■■□□ 2.92
MAP1LC3B-207ENST00000565788 NESP48681 1621 aa33.27■■■□□ 2.92
MAP1LC3B-207ENST00000565788 CUX2O14529 1486 aa33.18■■■□□ 2.9
MAP1LC3B-207ENST00000565788 WIZO95785 1651 aa33.11■■■□□ 2.89
MAP1LC3B-207ENST00000565788 LAMC3Q9Y6N6 1575 aa33.06■■■□□ 2.88
MAP1LC3B-207ENST00000565788 THOC2Q8NI27 1593 aaKnown RBP32.91■■■□□ 2.86
MAP1LC3B-207ENST00000565788 KIF21AQ7Z4S6 1674 aa32.87■■■□□ 2.85
MAP1LC3B-207ENST00000565788 RSF1Q96T23 1441 aaPredicted RBP32.85■■■□□ 2.85
MAP1LC3B-207ENST00000565788 DNAJC5Q9H3Z4 198 aa32.84■■■□□ 2.85
MAP1LC3B-207ENST00000565788 PDS5BQ9NTI5 1447 aa32.83■■■□□ 2.85
MAP1LC3B-207ENST00000565788 CADPSQ9ULU8 1353 aa32.82■■■□□ 2.84
MAP1LC3B-207ENST00000565788 TOP2AP11388 1531 aaKnown RBP32.7■■■□□ 2.83
MAP1LC3B-207ENST00000565788 MRC2Q9UBG0 1479 aa32.56■■■□□ 2.8
MAP1LC3B-207ENST00000565788 CFTRP13569 1480 aa32.51■■■□□ 2.79
MAP1LC3B-207ENST00000565788 WDR62O43379 1518 aa32.49■■■□□ 2.79
MAP1LC3B-207ENST00000565788 CEP164Q9UPV0 1460 aa32.48■■■□□ 2.79
MAP1LC3B-207ENST00000565788 FANCD2Q9BXW9 1451 aa32.47■■■□□ 2.79
MAP1LC3B-207ENST00000565788 CCDC88BA6NC98 1476 aa32.31■■■□□ 2.76
MAP1LC3B-207ENST00000565788 PRDM2Q13029 1718 aa32.27■■■□□ 2.76
MAP1LC3B-207ENST00000565788 URB2Q14146 1524 aaKnown RBP32.21■■■□□ 2.75
MAP1LC3B-207ENST00000565788 TOPBP1Q92547 1522 aa31.9■■■□□ 2.7
MAP1LC3B-207ENST00000565788 IFT140Q96RY7 1462 aa31.82■■■□□ 2.68
MAP1LC3B-207ENST00000565788 ABCC8Q09428 1581 aa31.8■■■□□ 2.68
MAP1LC3B-207ENST00000565788 DNMBPQ6XZF7 1577 aa31.8■■■□□ 2.68
MAP1LC3B-207ENST00000565788 ZNF608Q9ULD9 1512 aaPredicted RBP31.76■■■□□ 2.68
MAP1LC3B-207ENST00000565788 OSCARQ8IYS5 282 aa31.66■■■□□ 2.66
MAP1LC3B-207ENST00000565788 EIF4G3O43432 1585 aaKnown RBP31.62■■■□□ 2.65
MAP1LC3B-207ENST00000565788 TARBP1Q13395 1621 aaKnown RBP31.6■■■□□ 2.65
MAP1LC3B-207ENST00000565788 POLA1P09884 1462 aaPredicted RBP31.59■■■□□ 2.65
MAP1LC3B-207ENST00000565788 SUPT5HO00267 1087 aaKnown RBP31.57■■■□□ 2.64
MAP1LC3B-207ENST00000565788 TRIM41Q8WV44 630 aa31.53■■■□□ 2.64
MAP1LC3B-207ENST00000565788 AQRO60306 1485 aaKnown RBP eCLIP31.49■■■□□ 2.634e-6■■■■■ 31
MAP1LC3B-207ENST00000565788 RAD54L2Q9Y4B4 1467 aa31.47■■■□□ 2.63
MAP1LC3B-207ENST00000565788 CUX1P39880 1505 aa31.44■■■□□ 2.62
MAP1LC3B-207ENST00000565788 SOGA1O94964 1423 aa31.42■■■□□ 2.62
MAP1LC3B-207ENST00000565788 FGD5Q6ZNL6 1462 aa31.42■■■□□ 2.62
MAP1LC3B-207ENST00000565788 CHD1O14646 1710 aa31.35■■■□□ 2.61
MAP1LC3B-207ENST00000565788 TDRD9Q8NDG6 1382 aaKnown RBP31.33■■■□□ 2.61
MAP1LC3B-207ENST00000565788 RIMBP3CA6NJZ7 1639 aa31.3■■■□□ 2.6
MAP1LC3B-207ENST00000565788 RIMBP3BA6NNM3 1639 aa31.3■■■□□ 2.6
MAP1LC3B-207ENST00000565788 RIMBP3Q9UFD9 1639 aa31.3■■■□□ 2.6
MAP1LC3B-207ENST00000565788 WDR97A6NE52 1622 aa31.28■■■□□ 2.6
MAP1LC3B-207ENST00000565788 ARHGEF11O15085 1522 aa31.21■■■□□ 2.59
MAP1LC3B-207ENST00000565788 FBLN2P98095 1184 aa31.2■■■□□ 2.59
MAP1LC3B-207ENST00000565788 SNAPC4Q5SXM2 1469 aa31.2■■■□□ 2.58
MAP1LC3B-207ENST00000565788 GRIN2BQ13224 1484 aa31.13■■■□□ 2.57
MAP1LC3B-207ENST00000565788 MAGI1Q96QZ7 1491 aaPredicted RBP31.1■■■□□ 2.57
MAP1LC3B-207ENST00000565788 PBRM1Q86U86 1689 aa31.08■■■□□ 2.57
MAP1LC3B-207ENST00000565788 ABCA10Q8WWZ4 1543 aa31.08■■■□□ 2.57
MAP1LC3B-207ENST00000565788 GAPVD1Q14C86 1478 aa31.05■■■□□ 2.56
MAP1LC3B-207ENST00000565788 ABCA5Q8WWZ7 1642 aa31.04■■■□□ 2.56
MAP1LC3B-207ENST00000565788 BIVM-ERCC5R4GMW8 1640 aa31.02■■■□□ 2.56
MAP1LC3B-207ENST00000565788 CHMP7Q8WUX9 453 aaPredicted RBP31.01■■■□□ 2.55
MAP1LC3B-207ENST00000565788 TOP2BQ02880 1626 aa31■■■□□ 2.55
MAP1LC3B-207ENST00000565788 SYNJ2O15056 1496 aa31■■■□□ 2.55
MAP1LC3B-207ENST00000565788 WRNQ14191 1432 aaPredicted RBP eCLIP30.99■■■□□ 2.55
MAP1LC3B-207ENST00000565788 SYNJ1O43426 1573 aa30.99■■■□□ 2.55
MAP1LC3B-207ENST00000565788 CLASP1Q7Z460 1538 aa30.98■■■□□ 2.55
MAP1LC3B-207ENST00000565788 ARAP1Q96P48 1450 aa30.94■■■□□ 2.54
MAP1LC3B-207ENST00000565788 CYB5RLQ6IPT4 315 aa30.92■■■□□ 2.54
MAP1LC3B-207ENST00000565788 ADAMTS12P58397 1594 aa30.79■■■□□ 2.52
MAP1LC3B-207ENST00000565788 GRIN2AQ12879 1464 aa30.74■■■□□ 2.51
MAP1LC3B-207ENST00000565788 ERICH3Q5RHP9 1530 aa30.68■■■□□ 2.5
MAP1LC3B-207ENST00000565788 FHAD1B1AJZ9 1412 aa30.66■■■□□ 2.5
MAP1LC3B-207ENST00000565788 CEP170Q5SW79 1584 aa30.65■■■□□ 2.5
MAP1LC3B-207ENST00000565788 NUP160Q12769 1436 aa30.62■■■□□ 2.49
MAP1LC3B-207ENST00000565788 ERCC6L2Q5T890 1561 aa30.54■■■□□ 2.48
MAP1LC3B-207ENST00000565788 TRHP20396 242 aaPredicted RBP30.49■■■□□ 2.47
MAP1LC3B-207ENST00000565788 SHROOM2Q13796 1616 aa30.48■■■□□ 2.47
MAP1LC3B-207ENST00000565788 KIF27Q86VH2 1401 aa30.37■■■□□ 2.45
MAP1LC3B-207ENST00000565788 RUSC2Q8N2Y8 1516 aa30.34■■■□□ 2.45
MAP1LC3B-207ENST00000565788 IGF1RP08069 1367 aa30.33■■■□□ 2.45
MAP1LC3B-207ENST00000565788 CUL7Q14999 1698 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms