RNA–Protein interactions for RNA: ENST00000628181.1

CHD2-214, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-214ENST00000628181 AEBP2Q6ZN18 517 aaPredicted RBP22.85■■□□□ 1.25
CHD2-214ENST00000628181 CHIC1Q5VXU3 224 aa21.67■■□□□ 1.06
CHD2-214ENST00000628181 SENP3Q9H4L4 574 aaPredicted RBP19.44■□□□□ 0.7
CHD2-214ENST00000628181 PHF23Q9BUL5 403 aaPredicted RBP19.22■□□□□ 0.67
CHD2-214ENST00000628181 FOXD1Q16676 465 aa18.15■□□□□ 0.5
CHD2-214ENST00000628181 PLPPR3Q6T4P5 718 aa17.29■□□□□ 0.36
CHD2-214ENST00000628181 PPP6R1Q9UPN7 881 aa17■□□□□ 0.31
CHD2-214ENST00000628181 MSH5O43196 834 aa16.95■□□□□ 0.3
CHD2-214ENST00000628181 ADRA2BP18089 450 aa16.93■□□□□ 0.3
CHD2-214ENST00000628181 PIAS4Q8N2W9 510 aaPredicted RBP16.92■□□□□ 0.3
CHD2-214ENST00000628181 POTEDQ86YR6 584 aa16.58■□□□□ 0.24
CHD2-214ENST00000628181 MAPK8IP2Q13387 824 aaPredicted RBP15.56■□□□□ 0.08
CHD2-214ENST00000628181 SCAF1Q9H7N4 1312 aaKnown RBP15.44■□□□□ 0.06
CHD2-214ENST00000628181 DMRT2Q9Y5R5 561 aa15.43■□□□□ 0.06
CHD2-214ENST00000628181 PPP4R3CPQ6ZMV5 832 aa15.18■□□□□ 0.02
CHD2-214ENST00000628181 CNKSR2Q8WXI2 1034 aa14.88□□□□□ -0.03
CHD2-214ENST00000628181 HOXD11P31277 338 aaPredicted RBP14.87□□□□□ -0.03
CHD2-214ENST00000628181 DCAF8L1A6NGE4 600 aa14.76□□□□□ -0.05
CHD2-214ENST00000628181 RNF216Q9NWF9 866 aaPredicted RBP14.75□□□□□ -0.05
CHD2-214ENST00000628181 NCBP3Q53F19 620 aaKnown RBP14.56□□□□□ -0.08
CHD2-214ENST00000628181 CACNB1Q02641 598 aaPredicted RBP14.55□□□□□ -0.08
CHD2-214ENST00000628181 RNF39Q9H2S5 420 aa14.49□□□□□ -0.09
CHD2-214ENST00000628181 NPM3O75607 178 aaKnown RBP14.38□□□□□ -0.11
CHD2-214ENST00000628181 DNAJC5BQ9UF47 199 aa14.35□□□□□ -0.11
CHD2-214ENST00000628181 C1QBPQ07021 282 aaKnown RBP14.26□□□□□ -0.13
CHD2-214ENST00000628181 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.14□□□□□ -0.157e-7■■□□□ 12
CHD2-214ENST00000628181 KCNA4P22459 653 aa14.11□□□□□ -0.15
CHD2-214ENST00000628181 U3KPZ7 1027 aaPredicted RBP13.87□□□□□ -0.19
CHD2-214ENST00000628181 SLC4A2P04920 1241 aa13.76□□□□□ -0.21
CHD2-214ENST00000628181 SPINK5Q9NQ38 1064 aaPredicted RBP13.68□□□□□ -0.22
CHD2-214ENST00000628181 CAPN15O75808 1086 aa13.62□□□□□ -0.23
CHD2-214ENST00000628181 DSG3P32926 999 aa13.57□□□□□ -0.24
CHD2-214ENST00000628181 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.43□□□□□ -0.26
CHD2-214ENST00000628181 HNRNPUL2Q1KMD3 747 aaKnown RBP13.43□□□□□ -0.26
CHD2-214ENST00000628181 APLP2Q06481 763 aa13.42□□□□□ -0.26
CHD2-214ENST00000628181 TRHP20396 242 aaPredicted RBP13.41□□□□□ -0.26
CHD2-214ENST00000628181 ZNF219Q9P2Y4 722 aaPredicted RBP13.37□□□□□ -0.27
CHD2-214ENST00000628181 SAMD1Q6SPF0 538 aaPredicted RBP13.36□□□□□ -0.27
CHD2-214ENST00000628181 ABCB7O75027 752 aa13.32□□□□□ -0.28
CHD2-214ENST00000628181 SLC4A1APQ9BWU0 796 aaKnown RBP13.3□□□□□ -0.28
CHD2-214ENST00000628181 MYCNP04198 464 aaPredicted RBP13.28□□□□□ -0.28
CHD2-214ENST00000628181 FOXD4L1Q9NU39 408 aa13.14□□□□□ -0.31
CHD2-214ENST00000628181 POLA2Q14181 598 aa13.06□□□□□ -0.32
CHD2-214ENST00000628181 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
CHD2-214ENST00000628181 ZBTB22O15209 634 aa12.99□□□□□ -0.33
CHD2-214ENST00000628181 POTEHQ6S545 545 aa12.98□□□□□ -0.33
CHD2-214ENST00000628181 RBM42Q9BTD8 480 aaKnown RBP12.91□□□□□ -0.34
CHD2-214ENST00000628181 ATXN8OSP0DMR3 200 aa12.75□□□□□ -0.37
CHD2-214ENST00000628181 ZBTB12Q9Y330 459 aaPredicted RBP12.75□□□□□ -0.37
CHD2-214ENST00000628181 CHRDL2Q6WN34 429 aa12.65□□□□□ -0.38
CHD2-214ENST00000628181 AKT1S1Q96B36 256 aa12.64□□□□□ -0.39
CHD2-214ENST00000628181 OSCARQ8IYS5 282 aa12.63□□□□□ -0.39
CHD2-214ENST00000628181 REM2Q8IYK8 340 aaPredicted RBP12.53□□□□□ -0.4
CHD2-214ENST00000628181 FBLN2P98095 1184 aa12.45□□□□□ -0.42
CHD2-214ENST00000628181 MKRN4PQ13434 485 aaPredicted RBP12.42□□□□□ -0.42
CHD2-214ENST00000628181 SPDYE2BA6NHP3 402 aa12.39□□□□□ -0.43
CHD2-214ENST00000628181 PITPNM1O00562 1244 aa12.39□□□□□ -0.43
CHD2-214ENST00000628181 SPDYE6P0CI01 402 aa12.39□□□□□ -0.43
CHD2-214ENST00000628181 SPDYE2Q495Y8 402 aa12.39□□□□□ -0.43
CHD2-214ENST00000628181 CSRNP3Q8WYN3 585 aa12.39□□□□□ -0.43
CHD2-214ENST00000628181 PIP4P2Q8N4L2 257 aa12.37□□□□□ -0.43
CHD2-214ENST00000628181 FXR2P51116 673 aaKnown RBP eCLIP12.3□□□□□ -0.443e-11■□□□□ 8.7
CHD2-214ENST00000628181 ZNF692Q9BU19 519 aaPredicted RBP12.24□□□□□ -0.45
CHD2-214ENST00000628181 SSUH2Q9Y2M2 353 aa12.24□□□□□ -0.45
CHD2-214ENST00000628181 EHMT2Q96KQ7 1210 aa12.18□□□□□ -0.46
CHD2-214ENST00000628181 SPDYE1Q8NFV5 336 aaPredicted RBP12.16□□□□□ -0.46
CHD2-214ENST00000628181 SP7Q8TDD2 431 aaPredicted RBP12.16□□□□□ -0.46
CHD2-214ENST00000628181 CLEC11AQ9Y240 323 aa12.14□□□□□ -0.47
CHD2-214ENST00000628181 HAX1O00165 279 aa12.12□□□□□ -0.47
CHD2-214ENST00000628181 PABPN1Q86U42 306 aaKnown RBP eCLIP12.07□□□□□ -0.48
CHD2-214ENST00000628181 PRKAR2AP13861 404 aaKnown RBP12.06□□□□□ -0.48
CHD2-214ENST00000628181 EVX2Q03828 476 aa12.02□□□□□ -0.49
CHD2-214ENST00000628181 PRR29P0C7W0 189 aa11.95□□□□□ -0.5
CHD2-214ENST00000628181 CHADLQ6NUI6 762 aa11.94□□□□□ -0.5
CHD2-214ENST00000628181 C19orf67A6NJJ6 358 aa11.9□□□□□ -0.5
CHD2-214ENST00000628181 SPDYE4A6NLX3 237 aa11.8□□□□□ -0.52
CHD2-214ENST00000628181 FARP1Q9Y4F1 1045 aaPredicted RBP11.76□□□□□ -0.53
CHD2-214ENST00000628181 GABBR2O75899 941 aa11.73□□□□□ -0.53
CHD2-214ENST00000628181 STAG3Q9UJ98 1225 aa11.72□□□□□ -0.53
CHD2-214ENST00000628181 CREBZFQ9NS37 354 aa11.68□□□□□ -0.54
CHD2-214ENST00000628181 NISCHQ9Y2I1 1504 aa11.67□□□□□ -0.54
CHD2-214ENST00000628181 CD44P16070 742 aaKnown RBP11.67□□□□□ -0.54
CHD2-214ENST00000628181 PROM2Q8N271 834 aa11.54□□□□□ -0.56
CHD2-214ENST00000628181 CLCN6P51797 869 aa11.51□□□□□ -0.57
CHD2-214ENST00000628181 ZRANB1Q9UGI0 708 aa11.51□□□□□ -0.57
CHD2-214ENST00000628181 POTEIP0CG38 1075 aa11.5□□□□□ -0.57
CHD2-214ENST00000628181 ZNF579Q8NAF0 562 aaKnown RBP11.5□□□□□ -0.57
CHD2-214ENST00000628181 MNX1P50219 401 aaPredicted RBP11.49□□□□□ -0.57
CHD2-214ENST00000628181 NPM1P06748 294 aaKnown RBP eCLIP11.43□□□□□ -0.58
CHD2-214ENST00000628181 LHX8Q68G74 356 aa11.41□□□□□ -0.58
CHD2-214ENST00000628181 PAK3O75914 559 aaPredicted RBP11.38□□□□□ -0.59
CHD2-214ENST00000628181 GALR2O43603 387 aaPredicted RBP11.37□□□□□ -0.59
CHD2-214ENST00000628181 DCBLD2Q96PD2 775 aa11.37□□□□□ -0.59
CHD2-214ENST00000628181 PHF12Q96QT6 1004 aa11.36□□□□□ -0.59
CHD2-214ENST00000628181 MIER1Q8N108 512 aa11.25□□□□□ -0.61
CHD2-214ENST00000628181 TSPYL2Q9H2G4 693 aaPredicted RBP11.23□□□□□ -0.61
CHD2-214ENST00000628181 MS4A3Q96HJ5 214 aa11.21□□□□□ -0.61
CHD2-214ENST00000628181 FKBP8Q14318 412 aa11.2□□□□□ -0.62
CHD2-214ENST00000628181 CCDC61Q9Y6R9 512 aa11.2□□□□□ -0.62
CHD2-214ENST00000628181 PLEKHG5O94827 1062 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms