RNA–Protein interactions for RNA: ENST00000424924.5

SHANK2-206, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 6,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-206ENST00000424924 DCAF8L2P0C7V8 631 aa18.92■□□□□ 0.62
SHANK2-206ENST00000424924 EHMT2Q96KQ7 1210 aa17.61■□□□□ 0.41
SHANK2-206ENST00000424924 SUPT5HO00267 1087 aaKnown RBP17.39■□□□□ 0.37
SHANK2-206ENST00000424924 SHROOM4Q9ULL8 1493 aa17.13■□□□□ 0.33
SHANK2-206ENST00000424924 TTBK1Q5TCY1 1321 aaPredicted RBP16.9■□□□□ 0.3
SHANK2-206ENST00000424924 NISCHQ9Y2I1 1504 aa16.84■□□□□ 0.29
SHANK2-206ENST00000424924 RANGAP1P46060 587 aaPredicted RBP16.78■□□□□ 0.28
SHANK2-206ENST00000424924 APLP2Q06481 763 aa16.68■□□□□ 0.26
SHANK2-206ENST00000424924 FAM9AQ8IZU1 332 aaPredicted RBP16.64■□□□□ 0.25
SHANK2-206ENST00000424924 ATP1B4Q9UN42 357 aaPredicted RBP16.62■□□□□ 0.25
SHANK2-206ENST00000424924 PELP1Q8IZL8 1130 aaKnown RBP16.38■□□□□ 0.21
SHANK2-206ENST00000424924 PCGF6Q9BYE7 350 aa16.22■□□□□ 0.19
SHANK2-206ENST00000424924 MYT1LQ9UL68 1186 aa16.2■□□□□ 0.18
SHANK2-206ENST00000424924 CHIC1Q5VXU3 224 aa16.19■□□□□ 0.18
SHANK2-206ENST00000424924 ERICH6Q7L0X2 663 aa16.08■□□□□ 0.17
SHANK2-206ENST00000424924 UBTFP17480 764 aaKnown RBP15.98■□□□□ 0.15
SHANK2-206ENST00000424924 PPARGC1BQ86YN6 1023 aaKnown RBP15.94■□□□□ 0.14
SHANK2-206ENST00000424924 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.94■□□□□ 0.14
SHANK2-206ENST00000424924 HNRNPUL2Q1KMD3 747 aaKnown RBP15.94■□□□□ 0.14
SHANK2-206ENST00000424924 POLR3GLQ9BT43 218 aa15.92■□□□□ 0.14
SHANK2-206ENST00000424924 CNGB1Q14028 1251 aaPredicted RBP15.92■□□□□ 0.14
SHANK2-206ENST00000424924 CCER1Q8TC90 406 aaPredicted RBP15.91■□□□□ 0.14
SHANK2-206ENST00000424924 MYT1Q01538 1121 aa15.9■□□□□ 0.14
SHANK2-206ENST00000424924 TRIM41Q8WV44 630 aa15.87■□□□□ 0.13
SHANK2-206ENST00000424924 YTHDC1Q96MU7 727 aaKnown RBP15.86■□□□□ 0.13
SHANK2-206ENST00000424924 SLC4A1APQ9BWU0 796 aaKnown RBP15.8■□□□□ 0.12
SHANK2-206ENST00000424924 ITGAEP38570 1179 aa15.79■□□□□ 0.12
SHANK2-206ENST00000424924 NEFLP07196 543 aa15.62■□□□□ 0.09
SHANK2-206ENST00000424924 CENPBP07199 599 aaPredicted RBP15.59■□□□□ 0.09
SHANK2-206ENST00000424924 DAXXQ9UER7 740 aaPredicted RBP15.43■□□□□ 0.06
SHANK2-206ENST00000424924 SLC24A1O60721 1099 aa15.4■□□□□ 0.06
SHANK2-206ENST00000424924 PLPPR3Q6T4P5 718 aa15.38■□□□□ 0.05
SHANK2-206ENST00000424924 BCL11AQ9H165 835 aa15.37■□□□□ 0.05
SHANK2-206ENST00000424924 FBLN2P98095 1184 aa15.31■□□□□ 0.04
SHANK2-206ENST00000424924 BCANQ96GW7 911 aa15.31■□□□□ 0.04
SHANK2-206ENST00000424924 ZEB1P37275 1124 aaPredicted RBP15.3■□□□□ 0.04
SHANK2-206ENST00000424924 CLSPNQ9HAW4 1339 aa15.22■□□□□ 0.03
SHANK2-206ENST00000424924 PABPN1Q86U42 306 aaKnown RBP eCLIP15.2■□□□□ 0.02
SHANK2-206ENST00000424924 FAM50AQ14320 339 aaKnown RBP15.19■□□□□ 0.02
SHANK2-206ENST00000424924 TRIM52Q96A61 297 aa15.17■□□□□ 0.02
SHANK2-206ENST00000424924 ARID3CA6NKF2 412 aa15.15■□□□□ 0.02
SHANK2-206ENST00000424924 ZNF326Q5BKZ1 582 aaKnown RBP15.15■□□□□ 0.02
SHANK2-206ENST00000424924 LOC105371045A0A1W2PR82 267 aa15.1■□□□□ 0.01
SHANK2-206ENST00000424924 NEUROD1Q13562 356 aa15.07■□□□□ 0
SHANK2-206ENST00000424924 ZNF316A6NFI3 1004 aaPredicted RBP15.06■□□□□ 0
SHANK2-206ENST00000424924 TRIM26Q12899 539 aaPredicted RBP14.93□□□□□ -0.02
SHANK2-206ENST00000424924 ABCC9O60706 1549 aa14.93□□□□□ -0.02
SHANK2-206ENST00000424924 ZBTB47Q9UFB7 747 aaPredicted RBP14.92□□□□□ -0.02
SHANK2-206ENST00000424924 PLEKHG5O94827 1062 aa14.91□□□□□ -0.02
SHANK2-206ENST00000424924 P3H3Q8IVL6 736 aa14.9□□□□□ -0.02
SHANK2-206ENST00000424924 A0A0G2JS52 829 aa14.89□□□□□ -0.03
SHANK2-206ENST00000424924 SENP3Q9H4L4 574 aaPredicted RBP14.88□□□□□ -0.03
SHANK2-206ENST00000424924 SCAF1Q9H7N4 1312 aaKnown RBP14.87□□□□□ -0.03
SHANK2-206ENST00000424924 ESF1Q9H501 851 aaKnown RBP14.87□□□□□ -0.03
SHANK2-206ENST00000424924 ZNF777Q9ULD5 760 aaPredicted RBP14.86□□□□□ -0.03
SHANK2-206ENST00000424924 CANXP27824 592 aaKnown RBP14.84□□□□□ -0.03
SHANK2-206ENST00000424924 CHGAP10645 457 aaKnown RBP14.83□□□□□ -0.04
SHANK2-206ENST00000424924 STAG3Q9UJ98 1225 aa14.81□□□□□ -0.04
SHANK2-206ENST00000424924 HRCP23327 699 aa14.8□□□□□ -0.04
SHANK2-206ENST00000424924 RTL5Q5HYW3 569 aaPredicted RBP14.76□□□□□ -0.05
SHANK2-206ENST00000424924 NEFMP07197 916 aa14.74□□□□□ -0.05
SHANK2-206ENST00000424924 ZBTB7CA1YPR0 619 aa14.7□□□□□ -0.06
SHANK2-206ENST00000424924 DIEXFQ68CQ4 756 aaKnown RBP14.62□□□□□ -0.07
SHANK2-206ENST00000424924 ANP32CO43423 234 aa14.59□□□□□ -0.07
SHANK2-206ENST00000424924 NPM1P06748 294 aaKnown RBP eCLIP14.58□□□□□ -0.08
SHANK2-206ENST00000424924 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.58□□□□□ -0.08
SHANK2-206ENST00000424924 SALL2Q9Y467 1007 aaPredicted RBP14.55□□□□□ -0.08
SHANK2-206ENST00000424924 C14orf37Q86TY3 774 aa14.54□□□□□ -0.08
SHANK2-206ENST00000424924 NPM2Q86SE8 214 aaKnown RBP14.54□□□□□ -0.08
SHANK2-206ENST00000424924 TULP1O00294 542 aaPredicted RBP14.45□□□□□ -0.1
SHANK2-206ENST00000424924 ARXQ96QS3 562 aa14.44□□□□□ -0.1
SHANK2-206ENST00000424924 CDK11AQ9UQ88 783 aaPredicted RBP14.43□□□□□ -0.1
SHANK2-206ENST00000424924 HAP1P54257 671 aaPredicted RBP14.42□□□□□ -0.1
SHANK2-206ENST00000424924 ARID4BQ4LE39 1312 aaPredicted RBP14.39□□□□□ -0.11
SHANK2-206ENST00000424924 HSP90AA1P07900 732 aaKnown RBP14.39□□□□□ -0.11
SHANK2-206ENST00000424924 CHIC2Q9UKJ5 165 aa14.39□□□□□ -0.11
SHANK2-206ENST00000424924 KDM2AQ9Y2K7 1162 aa14.37□□□□□ -0.11
SHANK2-206ENST00000424924 KCNH8Q96L42 1107 aa14.33□□□□□ -0.12
SHANK2-206ENST00000424924 FAM9BQ8IZU0 186 aa14.3□□□□□ -0.12
SHANK2-206ENST00000424924 PPP1R15AO75807 674 aaPredicted RBP14.29□□□□□ -0.12
SHANK2-206ENST00000424924 LMOD2Q6P5Q4 547 aa14.28□□□□□ -0.12
SHANK2-206ENST00000424924 TRHP20396 242 aaPredicted RBP14.27□□□□□ -0.12
SHANK2-206ENST00000424924 TAOK2Q9UL54 1235 aa14.27□□□□□ -0.12
SHANK2-206ENST00000424924 GTF3C3Q9Y5Q9 886 aa14.27□□□□□ -0.12
SHANK2-206ENST00000424924 SENP3-EIF4A1A0A087X0R7 540 aa14.25□□□□□ -0.13
SHANK2-206ENST00000424924 EIF5BO60841 1220 aaKnown RBP14.25□□□□□ -0.13
SHANK2-206ENST00000424924 NPHP1O15259 732 aa14.23□□□□□ -0.13
SHANK2-206ENST00000424924 CHMP7Q8WUX9 453 aaPredicted RBP14.22□□□□□ -0.13
SHANK2-206ENST00000424924 TPRNQ4KMQ1 711 aa14.22□□□□□ -0.13
SHANK2-206ENST00000424924 NCBP3Q53F19 620 aaKnown RBP14.21□□□□□ -0.13
SHANK2-206ENST00000424924 ANP32AP39687 249 aaKnown RBP14.21□□□□□ -0.14
SHANK2-206ENST00000424924 PPM1GO15355 546 aaPredicted RBP14.19□□□□□ -0.14
SHANK2-206ENST00000424924 CDK11BP21127 795 aaKnown RBP14.18□□□□□ -0.14
SHANK2-206ENST00000424924 TMC1Q8TDI8 760 aa14.17□□□□□ -0.14
SHANK2-206ENST00000424924 HIRIP3Q9BW71 556 aaPredicted RBP14.16□□□□□ -0.14
SHANK2-206ENST00000424924 WDR43Q15061 677 aaKnown RBP eCLIP14.15□□□□□ -0.14
SHANK2-206ENST00000424924 ANP32BQ92688 251 aaKnown RBP14.15□□□□□ -0.14
SHANK2-206ENST00000424924 TONSLQ96HA7 1378 aa14.15□□□□□ -0.14
SHANK2-206ENST00000424924 SCRIBQ14160 1630 aa14.14□□□□□ -0.15
SHANK2-206ENST00000424924 HNRNPUQ00839 825 aaKnown RBP eCLIP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms