RNA–Protein interactions for RNA: ENST00000416938.5

AP4M1-203, Transcript of adaptor related protein complex 4 subunit mu 1, humanhuman

TSL 2

Gene AP4M1, Length 3,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1-203ENST00000416938 NISCHQ9Y2I1 1504 aa28.34■■■□□ 2.13
AP4M1-203ENST00000416938 DCAF8L2P0C7V8 631 aa24.72■■□□□ 1.55
AP4M1-203ENST00000416938 SHROOM4Q9ULL8 1493 aa24.37■■□□□ 1.49
AP4M1-203ENST00000416938 CCDC180Q9P1Z9 1646 aa24.14■■□□□ 1.45
AP4M1-203ENST00000416938 ZCCHC6Q5VYS8 1495 aaKnown RBP23.74■■□□□ 1.39
AP4M1-203ENST00000416938 ABCC9O60706 1549 aa23.72■■□□□ 1.39
AP4M1-203ENST00000416938 SUPT5HO00267 1087 aaKnown RBP23.59■■□□□ 1.37
AP4M1-203ENST00000416938 SCRIBQ14160 1630 aa23.02■■□□□ 1.28
AP4M1-203ENST00000416938 DCAF1Q9Y4B6 1507 aa22.93■■□□□ 1.26
AP4M1-203ENST00000416938 PABPN1Q86U42 306 aaKnown RBP eCLIP22.75■■□□□ 1.23
AP4M1-203ENST00000416938 NACADO15069 1562 aa22.66■■□□□ 1.22
AP4M1-203ENST00000416938 RB1CC1Q8TDY2 1594 aa22.57■■□□□ 1.2
AP4M1-203ENST00000416938 MYO15BQ96JP2 1530 aa22.48■■□□□ 1.19
AP4M1-203ENST00000416938 CECR2Q9BXF3 1484 aa22.38■■□□□ 1.17
AP4M1-203ENST00000416938 RSF1Q96T23 1441 aaPredicted RBP22.26■■□□□ 1.15
AP4M1-203ENST00000416938 CHIC1Q5VXU3 224 aa22.19■■□□□ 1.14
AP4M1-203ENST00000416938 MROH2BQ7Z745 1585 aa22.12■■□□□ 1.13
AP4M1-203ENST00000416938 EHMT2Q96KQ7 1210 aa22.07■■□□□ 1.12
AP4M1-203ENST00000416938 UNC13AQ9UPW8 1703 aa22.07■■□□□ 1.12
AP4M1-203ENST00000416938 WIZO95785 1651 aa21.96■■□□□ 1.11
AP4M1-203ENST00000416938 FAM9AQ8IZU1 332 aaPredicted RBP21.96■■□□□ 1.11
AP4M1-203ENST00000416938 BICRAQ9NZM4 1560 aa21.89■■□□□ 1.1
AP4M1-203ENST00000416938 TRIM41Q8WV44 630 aa21.85■■□□□ 1.09
AP4M1-203ENST00000416938 BAZ1AQ9NRL2 1556 aaPredicted RBP21.82■■□□□ 1.08
AP4M1-203ENST00000416938 LOC105371045A0A1W2PR82 267 aa21.78■■□□□ 1.08
AP4M1-203ENST00000416938 SMARCA4P51532 1647 aa21.71■■□□□ 1.07
AP4M1-203ENST00000416938 CCDC88BA6NC98 1476 aa21.51■■□□□ 1.03
AP4M1-203ENST00000416938 BAZ1BQ9UIG0 1483 aaKnown RBP21.44■■□□□ 1.02
AP4M1-203ENST00000416938 TOP2AP11388 1531 aaKnown RBP21.44■■□□□ 1.02
AP4M1-203ENST00000416938 ATAD2BQ9ULI0 1458 aa21.44■■□□□ 1.02
AP4M1-203ENST00000416938 EIF4G1Q04637 1599 aaKnown RBP21.35■■□□□ 1.01
AP4M1-203ENST00000416938 ABCC8Q09428 1581 aa21.35■■□□□ 1.01
AP4M1-203ENST00000416938 SMARCA2P51531 1590 aa21.34■■□□□ 1.01
AP4M1-203ENST00000416938 RANGAP1P46060 587 aaPredicted RBP21.2■□□□□ 0.98
AP4M1-203ENST00000416938 DNAJC5BQ9UF47 199 aa21.19■□□□□ 0.98
AP4M1-203ENST00000416938 PPARGC1BQ86YN6 1023 aaKnown RBP21.14■□□□□ 0.97
AP4M1-203ENST00000416938 TTBK1Q5TCY1 1321 aaPredicted RBP21.09■□□□□ 0.97
AP4M1-203ENST00000416938 PEG3Q9GZU2 1588 aa21.08■□□□□ 0.96
AP4M1-203ENST00000416938 CC2D2AQ9P2K1 1620 aa21.06■□□□□ 0.96
AP4M1-203ENST00000416938 UBTFP17480 764 aaKnown RBP21.06■□□□□ 0.96
AP4M1-203ENST00000416938 PCGF6Q9BYE7 350 aa21.06■□□□□ 0.96
AP4M1-203ENST00000416938 NCAPD3P42695 1498 aa21.05■□□□□ 0.96
AP4M1-203ENST00000416938 SOGA1O94964 1423 aa21.03■□□□□ 0.96
AP4M1-203ENST00000416938 WRNQ14191 1432 aaPredicted RBP eCLIP21.02■□□□□ 0.96
AP4M1-203ENST00000416938 RUSC2Q8N2Y8 1516 aa20.96■□□□□ 0.95
AP4M1-203ENST00000416938 CSRNP3Q8WYN3 585 aa20.9■□□□□ 0.94
AP4M1-203ENST00000416938 HMGXB3Q12766 1538 aa20.87■□□□□ 0.93
AP4M1-203ENST00000416938 SYNJ1O43426 1573 aa20.82■□□□□ 0.92
AP4M1-203ENST00000416938 NESP48681 1621 aa20.82■□□□□ 0.92
AP4M1-203ENST00000416938 CADPSQ9ULU8 1353 aa20.78■□□□□ 0.92
AP4M1-203ENST00000416938 CFTRP13569 1480 aa20.71■□□□□ 0.91
AP4M1-203ENST00000416938 PELP1Q8IZL8 1130 aaKnown RBP20.61■□□□□ 0.89
AP4M1-203ENST00000416938 CUX1P39880 1505 aa20.6■□□□□ 0.89
AP4M1-203ENST00000416938 FANCD2Q9BXW9 1451 aa20.59■□□□□ 0.89
AP4M1-203ENST00000416938 CEP162Q5TB80 1403 aa20.52■□□□□ 0.88
AP4M1-203ENST00000416938 TRIM26Q12899 539 aaPredicted RBP20.52■□□□□ 0.87
AP4M1-203ENST00000416938 TOP2BQ02880 1626 aa20.49■□□□□ 0.87
AP4M1-203ENST00000416938 CUX2O14529 1486 aa20.49■□□□□ 0.87
AP4M1-203ENST00000416938 RAPGEF2Q9Y4G8 1499 aa20.49■□□□□ 0.87
AP4M1-203ENST00000416938 EEA1Q15075 1411 aa20.47■□□□□ 0.87
AP4M1-203ENST00000416938 RAD54L2Q9Y4B4 1467 aa20.46■□□□□ 0.87
AP4M1-203ENST00000416938 GOLGA3Q08378 1498 aa20.46■□□□□ 0.87
AP4M1-203ENST00000416938 P3H3Q8IVL6 736 aa20.46■□□□□ 0.87
AP4M1-203ENST00000416938 FGD5Q6ZNL6 1462 aa20.45■□□□□ 0.86
AP4M1-203ENST00000416938 ATP1B4Q9UN42 357 aaPredicted RBP20.44■□□□□ 0.86
AP4M1-203ENST00000416938 KIF27Q86VH2 1401 aa20.43■□□□□ 0.86
AP4M1-203ENST00000416938 TNIKQ9UKE5 1360 aa20.41■□□□□ 0.86
AP4M1-203ENST00000416938 TDRD9Q8NDG6 1382 aaKnown RBP20.4■□□□□ 0.86
AP4M1-203ENST00000416938 CEP164Q9UPV0 1460 aa20.39■□□□□ 0.86
AP4M1-203ENST00000416938 APLP2Q06481 763 aa20.39■□□□□ 0.85
AP4M1-203ENST00000416938 PDS5BQ9NTI5 1447 aa20.36■□□□□ 0.85
AP4M1-203ENST00000416938 CLIP1P30622 1438 aa20.34■□□□□ 0.85
AP4M1-203ENST00000416938 BIVM-ERCC5R4GMW8 1640 aa20.32■□□□□ 0.84
AP4M1-203ENST00000416938 TOPBP1Q92547 1522 aa20.3■□□□□ 0.84
AP4M1-203ENST00000416938 IGF1RP08069 1367 aa20.28■□□□□ 0.84
AP4M1-203ENST00000416938 ERCC6Q03468 1493 aa20.28■□□□□ 0.84
AP4M1-203ENST00000416938 POLA1P09884 1462 aaPredicted RBP20.27■□□□□ 0.84
AP4M1-203ENST00000416938 CARMIL1Q5VZK9 1371 aa20.26■□□□□ 0.83
AP4M1-203ENST00000416938 URB2Q14146 1524 aaKnown RBP20.26■□□□□ 0.83
AP4M1-203ENST00000416938 FBLN2P98095 1184 aa20.25■□□□□ 0.83
AP4M1-203ENST00000416938 LAMC3Q9Y6N6 1575 aa20.23■□□□□ 0.83
AP4M1-203ENST00000416938 KIF21AQ7Z4S6 1674 aa20.2■□□□□ 0.82
AP4M1-203ENST00000416938 HNRNPUL2Q1KMD3 747 aaKnown RBP20.19■□□□□ 0.82
AP4M1-203ENST00000416938 PRDM2Q13029 1718 aa20.18■□□□□ 0.82
AP4M1-203ENST00000416938 HRCP23327 699 aa20.17■□□□□ 0.82
AP4M1-203ENST00000416938 DNMBPQ6XZF7 1577 aa20.17■□□□□ 0.82
AP4M1-203ENST00000416938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.17■□□□□ 0.82
AP4M1-203ENST00000416938 PRXQ9BXM0 1461 aa20.16■□□□□ 0.82
AP4M1-203ENST00000416938 ARID3CA6NKF2 412 aa20.15■□□□□ 0.82
AP4M1-203ENST00000416938 KIF21BO75037 1637 aa20.15■□□□□ 0.82
AP4M1-203ENST00000416938 AQRO60306 1485 aaKnown RBP eCLIP20.14■□□□□ 0.81
AP4M1-203ENST00000416938 ITGAEP38570 1179 aa20.11■□□□□ 0.81
AP4M1-203ENST00000416938 MYT1Q01538 1121 aa20.09■□□□□ 0.81
AP4M1-203ENST00000416938 KANK4Q5T7N3 995 aaPredicted RBP20.05■□□□□ 0.8
AP4M1-203ENST00000416938 GAPVD1Q14C86 1478 aa20.03■□□□□ 0.8
AP4M1-203ENST00000416938 CCER1Q8TC90 406 aaPredicted RBP20.03■□□□□ 0.8
AP4M1-203ENST00000416938 VPS8Q8N3P4 1428 aa20.01■□□□□ 0.79
AP4M1-203ENST00000416938 ABCA10Q8WWZ4 1543 aa20.01■□□□□ 0.79
AP4M1-203ENST00000416938 MRC2Q9UBG0 1479 aa20■□□□□ 0.79
AP4M1-203ENST00000416938 ZNF608Q9ULD9 1512 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms