RNA–Protein interactions for RNA: ENST00000409614.1

SERF2-207, Transcript of small EDRK-rich factor 2, humanhuman

TSL 2 BASIC

Gene SERF2, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF2-207ENST00000409614 NISCHQ9Y2I1 1504 aa48.77■■■■■ 5.4
SERF2-207ENST00000409614 CCDC180Q9P1Z9 1646 aa43.46■■■■■ 4.55
SERF2-207ENST00000409614 ABCC9O60706 1549 aa42.75■■■■■ 4.43
SERF2-207ENST00000409614 RB1CC1Q8TDY2 1594 aa40.99■■■■■ 4.15
SERF2-207ENST00000409614 NACADO15069 1562 aa40.91■■■■■ 4.14
SERF2-207ENST00000409614 DCAF8L2P0C7V8 631 aa40.66■■■■■ 4.1
SERF2-207ENST00000409614 MYO15BQ96JP2 1530 aa40.62■■■■■ 4.09
SERF2-207ENST00000409614 ZCCHC6Q5VYS8 1495 aaKnown RBP40.61■■■■■ 4.09
SERF2-207ENST00000409614 DCAF1Q9Y4B6 1507 aa40.35■■■■■ 4.05
SERF2-207ENST00000409614 UNC13AQ9UPW8 1703 aa40.11■■■■■ 4.01
SERF2-207ENST00000409614 PABPN1Q86U42 306 aaKnown RBP eCLIP39.87■■■■□ 3.97
SERF2-207ENST00000409614 BICRAQ9NZM4 1560 aa39.86■■■■□ 3.97
SERF2-207ENST00000409614 SCRIBQ14160 1630 aa39.62■■■■□ 3.93
SERF2-207ENST00000409614 DNAJC5BQ9UF47 199 aa39.51■■■■□ 3.92
SERF2-207ENST00000409614 SHROOM4Q9ULL8 1493 aa39.37■■■■□ 3.89
SERF2-207ENST00000409614 EIF4G1Q04637 1599 aaKnown RBP38.78■■■■□ 3.8
SERF2-207ENST00000409614 CC2D2AQ9P2K1 1620 aa38.67■■■■□ 3.78
SERF2-207ENST00000409614 CECR2Q9BXF3 1484 aa38.44■■■■□ 3.74
SERF2-207ENST00000409614 SMARCA4P51532 1647 aa37.9■■■■□ 3.66
SERF2-207ENST00000409614 BAZ1AQ9NRL2 1556 aaPredicted RBP37.79■■■■□ 3.64
SERF2-207ENST00000409614 NCAPD3P42695 1498 aa37.77■■■■□ 3.64
SERF2-207ENST00000409614 ATAD2BQ9ULI0 1458 aa37.76■■■■□ 3.63
SERF2-207ENST00000409614 SMARCA2P51531 1590 aa37.66■■■■□ 3.62
SERF2-207ENST00000409614 MROH2BQ7Z745 1585 aa37.6■■■■□ 3.61
SERF2-207ENST00000409614 HMGXB3Q12766 1538 aa37.57■■■■□ 3.61
SERF2-207ENST00000409614 PEG3Q9GZU2 1588 aa37.56■■■■□ 3.6
SERF2-207ENST00000409614 BAZ1BQ9UIG0 1483 aaKnown RBP37.39■■■■□ 3.58
SERF2-207ENST00000409614 WIZO95785 1651 aa37.15■■■■□ 3.54
SERF2-207ENST00000409614 RSF1Q96T23 1441 aaPredicted RBP37.07■■■■□ 3.52
SERF2-207ENST00000409614 NESP48681 1621 aa36.96■■■■□ 3.51
SERF2-207ENST00000409614 ERCC6Q03468 1493 aa36.81■■■■□ 3.48
SERF2-207ENST00000409614 LAMC3Q9Y6N6 1575 aa36.78■■■■□ 3.48
SERF2-207ENST00000409614 TOP2AP11388 1531 aaKnown RBP36.76■■■■□ 3.48
SERF2-207ENST00000409614 CADPSQ9ULU8 1353 aa36.63■■■■□ 3.45
SERF2-207ENST00000409614 CUX2O14529 1486 aa36.56■■■■□ 3.44
SERF2-207ENST00000409614 PDS5BQ9NTI5 1447 aa36.51■■■■□ 3.43
SERF2-207ENST00000409614 KIF21AQ7Z4S6 1674 aa36.48■■■■□ 3.43
SERF2-207ENST00000409614 THOC2Q8NI27 1593 aaKnown RBP36.48■■■■□ 3.43
SERF2-207ENST00000409614 CFTRP13569 1480 aa36.39■■■■□ 3.42
SERF2-207ENST00000409614 CCDC88BA6NC98 1476 aa36.31■■■■□ 3.4
SERF2-207ENST00000409614 FANCD2Q9BXW9 1451 aa36.21■■■■□ 3.39
SERF2-207ENST00000409614 MRC2Q9UBG0 1479 aa36.2■■■■□ 3.39
SERF2-207ENST00000409614 CEP164Q9UPV0 1460 aa36.18■■■■□ 3.38
SERF2-207ENST00000409614 WDR62O43379 1518 aa36.13■■■■□ 3.37
SERF2-207ENST00000409614 PRDM2Q13029 1718 aa36.05■■■■□ 3.36
SERF2-207ENST00000409614 URB2Q14146 1524 aaKnown RBP35.92■■■■□ 3.34
SERF2-207ENST00000409614 SUPT5HO00267 1087 aaKnown RBP35.81■■■■□ 3.32
SERF2-207ENST00000409614 DNAJC5Q9H3Z4 198 aa35.72■■■■□ 3.31
SERF2-207ENST00000409614 TOPBP1Q92547 1522 aa35.63■■■■□ 3.29
SERF2-207ENST00000409614 DNMBPQ6XZF7 1577 aa35.55■■■■□ 3.28
SERF2-207ENST00000409614 ABCC8Q09428 1581 aa35.54■■■■□ 3.28
SERF2-207ENST00000409614 IFT140Q96RY7 1462 aa35.44■■■■□ 3.26
SERF2-207ENST00000409614 ZNF608Q9ULD9 1512 aaPredicted RBP35.35■■■■□ 3.25
SERF2-207ENST00000409614 POLA1P09884 1462 aaPredicted RBP35.32■■■■□ 3.24
SERF2-207ENST00000409614 CUX1P39880 1505 aa35.29■■■■□ 3.24
SERF2-207ENST00000409614 TARBP1Q13395 1621 aaKnown RBP35.28■■■■□ 3.24
SERF2-207ENST00000409614 EIF4G3O43432 1585 aaKnown RBP35.19■■■■□ 3.22
SERF2-207ENST00000409614 FGD5Q6ZNL6 1462 aa35.18■■■■□ 3.22
SERF2-207ENST00000409614 RAD54L2Q9Y4B4 1467 aa35.16■■■■□ 3.22
SERF2-207ENST00000409614 SOGA1O94964 1423 aa35.11■■■■□ 3.21
SERF2-207ENST00000409614 AQRO60306 1485 aaKnown RBP eCLIP35.08■■■■□ 3.214e-9■■■■■ 47.1
SERF2-207ENST00000409614 TDRD9Q8NDG6 1382 aaKnown RBP34.96■■■■□ 3.19
SERF2-207ENST00000409614 WDR97A6NE52 1622 aa34.95■■■■□ 3.18
SERF2-207ENST00000409614 OSCARQ8IYS5 282 aa34.92■■■■□ 3.18
SERF2-207ENST00000409614 WRNQ14191 1432 aaPredicted RBP eCLIP34.91■■■■□ 3.18
SERF2-207ENST00000409614 BIVM-ERCC5R4GMW8 1640 aa34.9■■■■□ 3.18
SERF2-207ENST00000409614 SYNJ1O43426 1573 aa34.9■■■■□ 3.18
SERF2-207ENST00000409614 TOP2BQ02880 1626 aa34.89■■■■□ 3.18
SERF2-207ENST00000409614 ABCA10Q8WWZ4 1543 aa34.84■■■■□ 3.17
SERF2-207ENST00000409614 SNAPC4Q5SXM2 1469 aa34.77■■■■□ 3.16
SERF2-207ENST00000409614 CHD1O14646 1710 aa34.76■■■■□ 3.16
SERF2-207ENST00000409614 ABCA5Q8WWZ7 1642 aa34.75■■■■□ 3.15
SERF2-207ENST00000409614 GRIN2BQ13224 1484 aa34.75■■■■□ 3.15
SERF2-207ENST00000409614 GAPVD1Q14C86 1478 aa34.71■■■■□ 3.15
SERF2-207ENST00000409614 MAGI1Q96QZ7 1491 aaPredicted RBP34.69■■■■□ 3.14
SERF2-207ENST00000409614 PBRM1Q86U86 1689 aa34.66■■■■□ 3.14
SERF2-207ENST00000409614 FBLN2P98095 1184 aa34.59■■■■□ 3.13
SERF2-207ENST00000409614 SYNJ2O15056 1496 aa34.56■■■■□ 3.12
SERF2-207ENST00000409614 RIMBP3CA6NJZ7 1639 aa34.49■■■■□ 3.11
SERF2-207ENST00000409614 RIMBP3BA6NNM3 1639 aa34.49■■■■□ 3.11
SERF2-207ENST00000409614 RIMBP3Q9UFD9 1639 aa34.49■■■■□ 3.11
SERF2-207ENST00000409614 CHMP7Q8WUX9 453 aaPredicted RBP34.48■■■■□ 3.11
SERF2-207ENST00000409614 ARHGEF11O15085 1522 aa34.46■■■■□ 3.11
SERF2-207ENST00000409614 CLASP1Q7Z460 1538 aa34.44■■■■□ 3.1
SERF2-207ENST00000409614 ADAMTS12P58397 1594 aa34.43■■■■□ 3.1
SERF2-207ENST00000409614 ERICH3Q5RHP9 1530 aa34.4■■■■□ 3.1
SERF2-207ENST00000409614 TRIM41Q8WV44 630 aa34.37■■■■□ 3.09
SERF2-207ENST00000409614 GRIN2AQ12879 1464 aa34.33■■■■□ 3.09
SERF2-207ENST00000409614 FHAD1B1AJZ9 1412 aa34.31■■■■□ 3.08
SERF2-207ENST00000409614 NUP160Q12769 1436 aa34.21■■■■□ 3.07
SERF2-207ENST00000409614 ARAP1Q96P48 1450 aa34.2■■■■□ 3.06
SERF2-207ENST00000409614 CEP170Q5SW79 1584 aa34.19■■■■□ 3.06
SERF2-207ENST00000409614 KIF27Q86VH2 1401 aa34.18■■■■□ 3.06
SERF2-207ENST00000409614 IGF1RP08069 1367 aa34.11■■■■□ 3.05
SERF2-207ENST00000409614 CYB5RLQ6IPT4 315 aa34.06■■■■□ 3.04
SERF2-207ENST00000409614 CUL7Q14999 1698 aa34.02■■■■□ 3.04
SERF2-207ENST00000409614 SHROOM2Q13796 1616 aa33.99■■■■□ 3.03
SERF2-207ENST00000409614 ERCC6L2Q5T890 1561 aa33.95■■■■□ 3.03
SERF2-207ENST00000409614 RUSC2Q8N2Y8 1516 aa33.94■■■■□ 3.02
SERF2-207ENST00000409614 CARMIL1Q5VZK9 1371 aa33.86■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms