RNA–Protein interactions for RNA: ENST00000403425.5

SERF2-205, Transcript of small EDRK-rich factor 2, humanhuman

TSL 2 BASIC

Gene SERF2, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF2-205ENST00000403425 NISCHQ9Y2I1 1504 aa31.2■■■□□ 2.59
SERF2-205ENST00000403425 CCDC180Q9P1Z9 1646 aa27.67■■■□□ 2.02
SERF2-205ENST00000403425 ABCC9O60706 1549 aa27■■□□□ 1.91
SERF2-205ENST00000403425 DCAF8L2P0C7V8 631 aa26.22■■□□□ 1.79
SERF2-205ENST00000403425 NACADO15069 1562 aa26.13■■□□□ 1.77
SERF2-205ENST00000403425 RB1CC1Q8TDY2 1594 aa26.11■■□□□ 1.77
SERF2-205ENST00000403425 MYO15BQ96JP2 1530 aa26.07■■□□□ 1.76
SERF2-205ENST00000403425 ZCCHC6Q5VYS8 1495 aaKnown RBP25.92■■□□□ 1.74
SERF2-205ENST00000403425 DCAF1Q9Y4B6 1507 aa25.92■■□□□ 1.74
SERF2-205ENST00000403425 PABPN1Q86U42 306 aaKnown RBP eCLIP25.33■■□□□ 1.65
SERF2-205ENST00000403425 UNC13AQ9UPW8 1703 aa25.2■■□□□ 1.63
SERF2-205ENST00000403425 SHROOM4Q9ULL8 1493 aa25.17■■□□□ 1.62
SERF2-205ENST00000403425 BICRAQ9NZM4 1560 aa25.14■■□□□ 1.61
SERF2-205ENST00000403425 SCRIBQ14160 1630 aa25.11■■□□□ 1.61
SERF2-205ENST00000403425 DNAJC5BQ9UF47 199 aa24.8■■□□□ 1.56
SERF2-205ENST00000403425 EIF4G1Q04637 1599 aaKnown RBP24.54■■□□□ 1.52
SERF2-205ENST00000403425 CC2D2AQ9P2K1 1620 aa24.41■■□□□ 1.5
SERF2-205ENST00000403425 CECR2Q9BXF3 1484 aa24.35■■□□□ 1.49
SERF2-205ENST00000403425 BAZ1AQ9NRL2 1556 aaPredicted RBP24.21■■□□□ 1.47
SERF2-205ENST00000403425 NCAPD3P42695 1498 aa24.16■■□□□ 1.46
SERF2-205ENST00000403425 SMARCA4P51532 1647 aa24.1■■□□□ 1.45
SERF2-205ENST00000403425 SMARCA2P51531 1590 aa24.1■■□□□ 1.45
SERF2-205ENST00000403425 ATAD2BQ9ULI0 1458 aa24.07■■□□□ 1.44
SERF2-205ENST00000403425 PEG3Q9GZU2 1588 aa23.96■■□□□ 1.43
SERF2-205ENST00000403425 MROH2BQ7Z745 1585 aa23.95■■□□□ 1.42
SERF2-205ENST00000403425 HMGXB3Q12766 1538 aa23.92■■□□□ 1.42
SERF2-205ENST00000403425 BAZ1BQ9UIG0 1483 aaKnown RBP23.88■■□□□ 1.41
SERF2-205ENST00000403425 RSF1Q96T23 1441 aaPredicted RBP23.8■■□□□ 1.4
SERF2-205ENST00000403425 WIZO95785 1651 aa23.62■■□□□ 1.37
SERF2-205ENST00000403425 TOP2AP11388 1531 aaKnown RBP23.49■■□□□ 1.35
SERF2-205ENST00000403425 CADPSQ9ULU8 1353 aa23.47■■□□□ 1.35
SERF2-205ENST00000403425 LAMC3Q9Y6N6 1575 aa23.43■■□□□ 1.34
SERF2-205ENST00000403425 PDS5BQ9NTI5 1447 aa23.42■■□□□ 1.34
SERF2-205ENST00000403425 ERCC6Q03468 1493 aa23.39■■□□□ 1.34
SERF2-205ENST00000403425 NESP48681 1621 aa23.31■■□□□ 1.32
SERF2-205ENST00000403425 SUPT5HO00267 1087 aaKnown RBP23.29■■□□□ 1.32
SERF2-205ENST00000403425 CFTRP13569 1480 aa23.27■■□□□ 1.32
SERF2-205ENST00000403425 CCDC88BA6NC98 1476 aa23.25■■□□□ 1.31
SERF2-205ENST00000403425 CUX2O14529 1486 aa23.17■■□□□ 1.3
SERF2-205ENST00000403425 FANCD2Q9BXW9 1451 aa23.09■■□□□ 1.29
SERF2-205ENST00000403425 CEP164Q9UPV0 1460 aa23.06■■□□□ 1.28
SERF2-205ENST00000403425 MRC2Q9UBG0 1479 aa23.01■■□□□ 1.27
SERF2-205ENST00000403425 KIF21AQ7Z4S6 1674 aa22.96■■□□□ 1.27
SERF2-205ENST00000403425 ABCC8Q09428 1581 aa22.93■■□□□ 1.26
SERF2-205ENST00000403425 THOC2Q8NI27 1593 aaKnown RBP22.9■■□□□ 1.26
SERF2-205ENST00000403425 WDR62O43379 1518 aa22.87■■□□□ 1.25
SERF2-205ENST00000403425 PRDM2Q13029 1718 aa22.87■■□□□ 1.25
SERF2-205ENST00000403425 URB2Q14146 1524 aaKnown RBP22.76■■□□□ 1.23
SERF2-205ENST00000403425 TOPBP1Q92547 1522 aa22.68■■□□□ 1.22
SERF2-205ENST00000403425 DNMBPQ6XZF7 1577 aa22.65■■□□□ 1.22
SERF2-205ENST00000403425 IFT140Q96RY7 1462 aa22.64■■□□□ 1.21
SERF2-205ENST00000403425 SOGA1O94964 1423 aa22.54■■□□□ 1.2
SERF2-205ENST00000403425 DNAJC5Q9H3Z4 198 aa22.53■■□□□ 1.2
SERF2-205ENST00000403425 POLA1P09884 1462 aaPredicted RBP22.48■■□□□ 1.19
SERF2-205ENST00000403425 WRNQ14191 1432 aaPredicted RBP eCLIP22.48■■□□□ 1.19
SERF2-205ENST00000403425 CUX1P39880 1505 aa22.45■■□□□ 1.18
SERF2-205ENST00000403425 FGD5Q6ZNL6 1462 aa22.42■■□□□ 1.18
SERF2-205ENST00000403425 OSCARQ8IYS5 282 aa22.4■■□□□ 1.18
SERF2-205ENST00000403425 WDR97A6NE52 1622 aa22.36■■□□□ 1.17
SERF2-205ENST00000403425 TARBP1Q13395 1621 aaKnown RBP22.36■■□□□ 1.17
SERF2-205ENST00000403425 RAD54L2Q9Y4B4 1467 aa22.35■■□□□ 1.17
SERF2-205ENST00000403425 ZNF608Q9ULD9 1512 aaPredicted RBP22.35■■□□□ 1.17
SERF2-205ENST00000403425 TDRD9Q8NDG6 1382 aaKnown RBP22.34■■□□□ 1.17
SERF2-205ENST00000403425 TOP2BQ02880 1626 aa22.33■■□□□ 1.17
SERF2-205ENST00000403425 AQRO60306 1485 aaKnown RBP eCLIP22.33■■□□□ 1.164e-9■■■■■ 47.1
SERF2-205ENST00000403425 ABCA10Q8WWZ4 1543 aa22.28■■□□□ 1.16
SERF2-205ENST00000403425 BIVM-ERCC5R4GMW8 1640 aa22.27■■□□□ 1.16
SERF2-205ENST00000403425 GRIN2BQ13224 1484 aa22.24■■□□□ 1.15
SERF2-205ENST00000403425 GAPVD1Q14C86 1478 aa22.22■■□□□ 1.15
SERF2-205ENST00000403425 CHMP7Q8WUX9 453 aaPredicted RBP22.22■■□□□ 1.15
SERF2-205ENST00000403425 EIF4G3O43432 1585 aaKnown RBP22.21■■□□□ 1.15
SERF2-205ENST00000403425 FBLN2P98095 1184 aa22.2■■□□□ 1.14
SERF2-205ENST00000403425 SYNJ1O43426 1573 aa22.2■■□□□ 1.14
SERF2-205ENST00000403425 MAGI1Q96QZ7 1491 aaPredicted RBP22.17■■□□□ 1.14
SERF2-205ENST00000403425 TRIM41Q8WV44 630 aa22.13■■□□□ 1.13
SERF2-205ENST00000403425 KIF27Q86VH2 1401 aa22.09■■□□□ 1.13
SERF2-205ENST00000403425 SYNJ2O15056 1496 aa22.07■■□□□ 1.12
SERF2-205ENST00000403425 SNAPC4Q5SXM2 1469 aa22.06■■□□□ 1.12
SERF2-205ENST00000403425 ABCA5Q8WWZ7 1642 aa22.04■■□□□ 1.12
SERF2-205ENST00000403425 ERICH3Q5RHP9 1530 aa22.04■■□□□ 1.12
SERF2-205ENST00000403425 FHAD1B1AJZ9 1412 aa22.02■■□□□ 1.12
SERF2-205ENST00000403425 IGF1RP08069 1367 aa21.98■■□□□ 1.11
SERF2-205ENST00000403425 PBRM1Q86U86 1689 aa21.94■■□□□ 1.1
SERF2-205ENST00000403425 CHD1O14646 1710 aa21.88■■□□□ 1.09
SERF2-205ENST00000403425 GRIN2AQ12879 1464 aa21.88■■□□□ 1.09
SERF2-205ENST00000403425 CARMIL1Q5VZK9 1371 aa21.86■■□□□ 1.09
SERF2-205ENST00000403425 ADAMTS12P58397 1594 aa21.82■■□□□ 1.08
SERF2-205ENST00000403425 NUP160Q12769 1436 aa21.8■■□□□ 1.08
SERF2-205ENST00000403425 CHIC1Q5VXU3 224 aa21.78■■□□□ 1.08
SERF2-205ENST00000403425 CUL7Q14999 1698 aa21.78■■□□□ 1.08
SERF2-205ENST00000403425 JPH4Q96JJ6 628 aa21.76■■□□□ 1.07
SERF2-205ENST00000403425 EEA1Q15075 1411 aa21.75■■□□□ 1.07
SERF2-205ENST00000403425 CSRNP3Q8WYN3 585 aa21.75■■□□□ 1.07
SERF2-205ENST00000403425 CLASP1Q7Z460 1538 aa21.75■■□□□ 1.07
SERF2-205ENST00000403425 ARHGEF11O15085 1522 aa21.73■■□□□ 1.07
SERF2-205ENST00000403425 CYB5RLQ6IPT4 315 aa21.72■■□□□ 1.07
SERF2-205ENST00000403425 RAPGEF2Q9Y4G8 1499 aa21.69■■□□□ 1.06
SERF2-205ENST00000403425 KIAA0586Q9BVV6 1533 aa21.69■■□□□ 1.06
SERF2-205ENST00000403425 RIMBP3CA6NJZ7 1639 aa21.66■■□□□ 1.06
SERF2-205ENST00000403425 RIMBP3BA6NNM3 1639 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms