RNA–Protein interactions for RNA: ENST00000475927.5

SERF2-215, Transcript of small EDRK-rich factor 2, humanhuman

TSL 2

Gene SERF2, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF2-215ENST00000475927 NISCHQ9Y2I1 1504 aa31.36■■■□□ 2.61
SERF2-215ENST00000475927 CCDC180Q9P1Z9 1646 aa27.89■■■□□ 2.06
SERF2-215ENST00000475927 ABCC9O60706 1549 aa27.25■■□□□ 1.95
SERF2-215ENST00000475927 RB1CC1Q8TDY2 1594 aa26.26■■□□□ 1.79
SERF2-215ENST00000475927 NACADO15069 1562 aa26.24■■□□□ 1.79
SERF2-215ENST00000475927 DCAF8L2P0C7V8 631 aa26.22■■□□□ 1.79
SERF2-215ENST00000475927 ZCCHC6Q5VYS8 1495 aaKnown RBP26.14■■□□□ 1.78
SERF2-215ENST00000475927 MYO15BQ96JP2 1530 aa26.1■■□□□ 1.77
SERF2-215ENST00000475927 DCAF1Q9Y4B6 1507 aa25.98■■□□□ 1.75
SERF2-215ENST00000475927 UNC13AQ9UPW8 1703 aa25.54■■□□□ 1.68
SERF2-215ENST00000475927 PABPN1Q86U42 306 aaKnown RBP eCLIP25.45■■□□□ 1.66
SERF2-215ENST00000475927 SCRIBQ14160 1630 aa25.43■■□□□ 1.66
SERF2-215ENST00000475927 BICRAQ9NZM4 1560 aa25.39■■□□□ 1.66
SERF2-215ENST00000475927 SHROOM4Q9ULL8 1493 aa25.26■■□□□ 1.63
SERF2-215ENST00000475927 DNAJC5BQ9UF47 199 aa24.93■■□□□ 1.58
SERF2-215ENST00000475927 EIF4G1Q04637 1599 aaKnown RBP24.76■■□□□ 1.55
SERF2-215ENST00000475927 CC2D2AQ9P2K1 1620 aa24.64■■□□□ 1.54
SERF2-215ENST00000475927 CECR2Q9BXF3 1484 aa24.51■■□□□ 1.51
SERF2-215ENST00000475927 BAZ1AQ9NRL2 1556 aaPredicted RBP24.34■■□□□ 1.49
SERF2-215ENST00000475927 SMARCA4P51532 1647 aa24.33■■□□□ 1.49
SERF2-215ENST00000475927 SMARCA2P51531 1590 aa24.2■■□□□ 1.47
SERF2-215ENST00000475927 ATAD2BQ9ULI0 1458 aa24.2■■□□□ 1.47
SERF2-215ENST00000475927 NCAPD3P42695 1498 aa24.19■■□□□ 1.46
SERF2-215ENST00000475927 MROH2BQ7Z745 1585 aa24.14■■□□□ 1.45
SERF2-215ENST00000475927 PEG3Q9GZU2 1588 aa24.11■■□□□ 1.45
SERF2-215ENST00000475927 HMGXB3Q12766 1538 aa24.1■■□□□ 1.45
SERF2-215ENST00000475927 BAZ1BQ9UIG0 1483 aaKnown RBP24.03■■□□□ 1.44
SERF2-215ENST00000475927 RSF1Q96T23 1441 aaPredicted RBP23.89■■□□□ 1.41
SERF2-215ENST00000475927 WIZO95785 1651 aa23.87■■□□□ 1.41
SERF2-215ENST00000475927 TOP2AP11388 1531 aaKnown RBP23.68■■□□□ 1.38
SERF2-215ENST00000475927 LAMC3Q9Y6N6 1575 aa23.57■■□□□ 1.36
SERF2-215ENST00000475927 NESP48681 1621 aa23.56■■□□□ 1.36
SERF2-215ENST00000475927 ERCC6Q03468 1493 aa23.55■■□□□ 1.36
SERF2-215ENST00000475927 CADPSQ9ULU8 1353 aa23.5■■□□□ 1.35
SERF2-215ENST00000475927 PDS5BQ9NTI5 1447 aa23.43■■□□□ 1.34
SERF2-215ENST00000475927 CCDC88BA6NC98 1476 aa23.37■■□□□ 1.33
SERF2-215ENST00000475927 CFTRP13569 1480 aa23.36■■□□□ 1.33
SERF2-215ENST00000475927 SUPT5HO00267 1087 aaKnown RBP23.3■■□□□ 1.32
SERF2-215ENST00000475927 CUX2O14529 1486 aa23.29■■□□□ 1.32
SERF2-215ENST00000475927 KIF21AQ7Z4S6 1674 aa23.27■■□□□ 1.32
SERF2-215ENST00000475927 FANCD2Q9BXW9 1451 aa23.23■■□□□ 1.31
SERF2-215ENST00000475927 THOC2Q8NI27 1593 aaKnown RBP23.23■■□□□ 1.31
SERF2-215ENST00000475927 CEP164Q9UPV0 1460 aa23.22■■□□□ 1.31
SERF2-215ENST00000475927 MRC2Q9UBG0 1479 aa23.17■■□□□ 1.3
SERF2-215ENST00000475927 PRDM2Q13029 1718 aa23.13■■□□□ 1.29
SERF2-215ENST00000475927 WDR62O43379 1518 aa23.08■■□□□ 1.29
SERF2-215ENST00000475927 URB2Q14146 1524 aaKnown RBP22.97■■□□□ 1.27
SERF2-215ENST00000475927 ABCC8Q09428 1581 aa22.93■■□□□ 1.26
SERF2-215ENST00000475927 TOPBP1Q92547 1522 aa22.84■■□□□ 1.25
SERF2-215ENST00000475927 DNMBPQ6XZF7 1577 aa22.84■■□□□ 1.25
SERF2-215ENST00000475927 IFT140Q96RY7 1462 aa22.73■■□□□ 1.23
SERF2-215ENST00000475927 CUX1P39880 1505 aa22.66■■□□□ 1.22
SERF2-215ENST00000475927 POLA1P09884 1462 aaPredicted RBP22.65■■□□□ 1.22
SERF2-215ENST00000475927 FGD5Q6ZNL6 1462 aa22.6■■□□□ 1.21
SERF2-215ENST00000475927 SOGA1O94964 1423 aa22.57■■□□□ 1.2
SERF2-215ENST00000475927 TARBP1Q13395 1621 aaKnown RBP22.57■■□□□ 1.2
SERF2-215ENST00000475927 ZNF608Q9ULD9 1512 aaPredicted RBP22.57■■□□□ 1.2
SERF2-215ENST00000475927 WRNQ14191 1432 aaPredicted RBP eCLIP22.57■■□□□ 1.2
SERF2-215ENST00000475927 DNAJC5Q9H3Z4 198 aa22.53■■□□□ 1.2
SERF2-215ENST00000475927 RAD54L2Q9Y4B4 1467 aa22.53■■□□□ 1.2
SERF2-215ENST00000475927 EIF4G3O43432 1585 aaKnown RBP22.5■■□□□ 1.19
SERF2-215ENST00000475927 TOP2BQ02880 1626 aa22.49■■□□□ 1.19
SERF2-215ENST00000475927 BIVM-ERCC5R4GMW8 1640 aa22.48■■□□□ 1.19
SERF2-215ENST00000475927 WDR97A6NE52 1622 aa22.47■■□□□ 1.19
SERF2-215ENST00000475927 SYNJ1O43426 1573 aa22.46■■□□□ 1.19
SERF2-215ENST00000475927 AQRO60306 1485 aaKnown RBP eCLIP22.45■■□□□ 1.186e-9■■■■■ 48.9
SERF2-215ENST00000475927 TDRD9Q8NDG6 1382 aaKnown RBP22.42■■□□□ 1.18
SERF2-215ENST00000475927 OSCARQ8IYS5 282 aa22.4■■□□□ 1.18
SERF2-215ENST00000475927 ABCA10Q8WWZ4 1543 aa22.4■■□□□ 1.18
SERF2-215ENST00000475927 GRIN2BQ13224 1484 aa22.32■■□□□ 1.16
SERF2-215ENST00000475927 GAPVD1Q14C86 1478 aa22.32■■□□□ 1.16
SERF2-215ENST00000475927 ABCA5Q8WWZ7 1642 aa22.28■■□□□ 1.16
SERF2-215ENST00000475927 SNAPC4Q5SXM2 1469 aa22.28■■□□□ 1.16
SERF2-215ENST00000475927 MAGI1Q96QZ7 1491 aaPredicted RBP22.27■■□□□ 1.16
SERF2-215ENST00000475927 PBRM1Q86U86 1689 aa22.23■■□□□ 1.15
SERF2-215ENST00000475927 CHMP7Q8WUX9 453 aaPredicted RBP22.22■■□□□ 1.15
SERF2-215ENST00000475927 FBLN2P98095 1184 aa22.21■■□□□ 1.15
SERF2-215ENST00000475927 CHD1O14646 1710 aa22.17■■□□□ 1.14
SERF2-215ENST00000475927 SYNJ2O15056 1496 aa22.17■■□□□ 1.14
SERF2-215ENST00000475927 ERICH3Q5RHP9 1530 aa22.15■■□□□ 1.14
SERF2-215ENST00000475927 TRIM41Q8WV44 630 aa22.13■■□□□ 1.13
SERF2-215ENST00000475927 KIF27Q86VH2 1401 aa22.11■■□□□ 1.13
SERF2-215ENST00000475927 ADAMTS12P58397 1594 aa22.08■■□□□ 1.13
SERF2-215ENST00000475927 FHAD1B1AJZ9 1412 aa22.07■■□□□ 1.12
SERF2-215ENST00000475927 GRIN2AQ12879 1464 aa22.03■■□□□ 1.12
SERF2-215ENST00000475927 CLASP1Q7Z460 1538 aa21.98■■□□□ 1.11
SERF2-215ENST00000475927 IGF1RP08069 1367 aa21.98■■□□□ 1.11
SERF2-215ENST00000475927 CUL7Q14999 1698 aa21.95■■□□□ 1.1
SERF2-215ENST00000475927 ARHGEF11O15085 1522 aa21.93■■□□□ 1.1
SERF2-215ENST00000475927 NUP160Q12769 1436 aa21.92■■□□□ 1.1
SERF2-215ENST00000475927 RIMBP3CA6NJZ7 1639 aa21.91■■□□□ 1.1
SERF2-215ENST00000475927 RIMBP3BA6NNM3 1639 aa21.91■■□□□ 1.1
SERF2-215ENST00000475927 RIMBP3Q9UFD9 1639 aa21.91■■□□□ 1.1
SERF2-215ENST00000475927 CEP170Q5SW79 1584 aa21.88■■□□□ 1.09
SERF2-215ENST00000475927 CARMIL1Q5VZK9 1371 aa21.86■■□□□ 1.09
SERF2-215ENST00000475927 RUSC2Q8N2Y8 1516 aa21.81■■□□□ 1.08
SERF2-215ENST00000475927 CHIC1Q5VXU3 224 aa21.78■■□□□ 1.08
SERF2-215ENST00000475927 JPH4Q96JJ6 628 aa21.76■■□□□ 1.07
SERF2-215ENST00000475927 EEA1Q15075 1411 aa21.75■■□□□ 1.07
SERF2-215ENST00000475927 CSRNP3Q8WYN3 585 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms