RNA–Protein interactions for RNA: ENST00000487842.1

SCML1-207, Transcript of Scm polycomb group protein like 1, humanhuman

TSL 1 (best)

Gene SCML1, Length 4,615 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML1-207ENST00000487842 PELP1Q8IZL8 1130 aaKnown RBP9.66□□□□□ -0.86
SCML1-207ENST00000487842 MYT1Q01538 1121 aa9.57□□□□□ -0.88
SCML1-207ENST00000487842 NISCHQ9Y2I1 1504 aa9.3□□□□□ -0.92
SCML1-207ENST00000487842 TTBK1Q5TCY1 1321 aaPredicted RBP9.03□□□□□ -0.96
SCML1-207ENST00000487842 ZEB1P37275 1124 aaPredicted RBP9.01□□□□□ -0.97
SCML1-207ENST00000487842 CENPBP07199 599 aaPredicted RBP8.92□□□□□ -0.98
SCML1-207ENST00000487842 HRCP23327 699 aa8.92□□□□□ -0.98
SCML1-207ENST00000487842 SUPT5HO00267 1087 aaKnown RBP8.89□□□□□ -0.99
SCML1-207ENST00000487842 PCGF6Q9BYE7 350 aa8.85□□□□□ -0.99
SCML1-207ENST00000487842 ERICH6Q7L0X2 663 aa8.66□□□□□ -1.02
SCML1-207ENST00000487842 TRIM26Q12899 539 aaPredicted RBP8.64□□□□□ -1.03
SCML1-207ENST00000487842 CCER1Q8TC90 406 aaPredicted RBP8.64□□□□□ -1.03
SCML1-207ENST00000487842 SHROOM4Q9ULL8 1493 aa8.64□□□□□ -1.03
SCML1-207ENST00000487842 DCAF8L2P0C7V8 631 aa8.63□□□□□ -1.03
SCML1-207ENST00000487842 PPARGC1BQ86YN6 1023 aaKnown RBP8.55□□□□□ -1.04
SCML1-207ENST00000487842 SCAF1Q9H7N4 1312 aaKnown RBP8.53□□□□□ -1.04
SCML1-207ENST00000487842 NEFLP07196 543 aa8.44□□□□□ -1.06
SCML1-207ENST00000487842 BCL11AQ9H165 835 aa8.42□□□□□ -1.06
SCML1-207ENST00000487842 ACIN1Q9UKV3 1341 aaKnown RBP8.41□□□□□ -1.06
SCML1-207ENST00000487842 APLP2Q06481 763 aa8.41□□□□□ -1.06
SCML1-207ENST00000487842 CHIC1Q5VXU3 224 aa8.41□□□□□ -1.06
SCML1-207ENST00000487842 CLSPNQ9HAW4 1339 aa8.39□□□□□ -1.07
SCML1-207ENST00000487842 GTF3C3Q9Y5Q9 886 aa8.38□□□□□ -1.07
SCML1-207ENST00000487842 DCAF1Q9Y4B6 1507 aa8.35□□□□□ -1.07
SCML1-207ENST00000487842 TRIM41Q8WV44 630 aa8.34□□□□□ -1.07
SCML1-207ENST00000487842 DIEXFQ68CQ4 756 aaKnown RBP8.34□□□□□ -1.07
SCML1-207ENST00000487842 YTHDC1Q96MU7 727 aaKnown RBP8.33□□□□□ -1.08
SCML1-207ENST00000487842 PRKCSHP14314 528 aaPredicted RBP8.31□□□□□ -1.08
SCML1-207ENST00000487842 FAM9AQ8IZU1 332 aaPredicted RBP8.26□□□□□ -1.09
SCML1-207ENST00000487842 MYT1LQ9UL68 1186 aa8.26□□□□□ -1.09
SCML1-207ENST00000487842 EHMT2Q96KQ7 1210 aa8.23□□□□□ -1.09
SCML1-207ENST00000487842 NEUROD1Q13562 356 aa8.23□□□□□ -1.09
SCML1-207ENST00000487842 ANP32EQ9BTT0 268 aa8.23□□□□□ -1.09
SCML1-207ENST00000487842 LOC105371045A0A1W2PR82 267 aa8.17□□□□□ -1.1
SCML1-207ENST00000487842 RTL5Q5HYW3 569 aaPredicted RBP8.17□□□□□ -1.1
SCML1-207ENST00000487842 CCDC180Q9P1Z9 1646 aa8.16□□□□□ -1.1
SCML1-207ENST00000487842 ZNF316A6NFI3 1004 aaPredicted RBP8.16□□□□□ -1.1
SCML1-207ENST00000487842 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.1□□□□□ -1.11
SCML1-207ENST00000487842 UBTFP17480 764 aaKnown RBP8.07□□□□□ -1.12
SCML1-207ENST00000487842 SLC24A1O60721 1099 aa8.06□□□□□ -1.12
SCML1-207ENST00000487842 CDK11AQ9UQ88 783 aaPredicted RBP8.06□□□□□ -1.12
SCML1-207ENST00000487842 DAXXQ9UER7 740 aaPredicted RBP8.05□□□□□ -1.12
SCML1-207ENST00000487842 CSRNP3Q8WYN3 585 aa8□□□□□ -1.13
SCML1-207ENST00000487842 GLIPR1L2Q4G1C9 344 aa7.98□□□□□ -1.13
SCML1-207ENST00000487842 EIF5BO60841 1220 aaKnown RBP7.96□□□□□ -1.14
SCML1-207ENST00000487842 HNRNPUL2Q1KMD3 747 aaKnown RBP7.94□□□□□ -1.14
SCML1-207ENST00000487842 ANP32AP39687 249 aaKnown RBP7.92□□□□□ -1.14
SCML1-207ENST00000487842 MYO15BQ96JP2 1530 aa7.92□□□□□ -1.14
SCML1-207ENST00000487842 ANP32CO43423 234 aa7.91□□□□□ -1.14
SCML1-207ENST00000487842 BCANQ96GW7 911 aa7.9□□□□□ -1.14
SCML1-207ENST00000487842 FKBP8Q14318 412 aa7.86□□□□□ -1.15
SCML1-207ENST00000487842 ERICH6BQ5W0A0 696 aa7.86□□□□□ -1.15
SCML1-207ENST00000487842 ZCCHC6Q5VYS8 1495 aaKnown RBP7.85□□□□□ -1.15
SCML1-207ENST00000487842 TSHZ2Q9NRE2 1034 aa7.83□□□□□ -1.16
SCML1-207ENST00000487842 MIER1Q8N108 512 aa7.83□□□□□ -1.16
SCML1-207ENST00000487842 SUPT16HQ9Y5B9 1047 aaKnown RBP7.8□□□□□ -1.16
SCML1-207ENST00000487842 RANGAP1P46060 587 aaPredicted RBP7.78□□□□□ -1.16
SCML1-207ENST00000487842 ZBTB47Q9UFB7 747 aaPredicted RBP7.78□□□□□ -1.16
SCML1-207ENST00000487842 UBE2Q2Q8WVN8 375 aa7.77□□□□□ -1.16
SCML1-207ENST00000487842 ANO8Q9HCE9 1232 aaPredicted RBP7.76□□□□□ -1.17
SCML1-207ENST00000487842 DEKP35659 375 aaKnown RBP7.76□□□□□ -1.17
SCML1-207ENST00000487842 ITGAEP38570 1179 aa7.72□□□□□ -1.17
SCML1-207ENST00000487842 EEA1Q15075 1411 aa7.72□□□□□ -1.17
SCML1-207ENST00000487842 PKNOX2Q96KN3 472 aa7.71□□□□□ -1.17
SCML1-207ENST00000487842 PPM1GO15355 546 aaPredicted RBP7.71□□□□□ -1.18
SCML1-207ENST00000487842 ATP1B4Q9UN42 357 aaPredicted RBP7.71□□□□□ -1.18
SCML1-207ENST00000487842 RBM19Q9Y4C8 960 aaKnown RBP7.71□□□□□ -1.18
SCML1-207ENST00000487842 DDRGK1Q96HY6 314 aa7.69□□□□□ -1.18
SCML1-207ENST00000487842 NBR1Q14596 966 aa7.69□□□□□ -1.18
SCML1-207ENST00000487842 PODXL2Q9NZ53 605 aa7.68□□□□□ -1.18
SCML1-207ENST00000487842 NOP58Q9Y2X3 529 aaKnown RBP7.68□□□□□ -1.18
SCML1-207ENST00000487842 HNRNPUQ00839 825 aaKnown RBP eCLIP7.67□□□□□ -1.18
SCML1-207ENST00000487842 CCDC136Q96JN2 1154 aa7.66□□□□□ -1.18
SCML1-207ENST00000487842 PPP4R2Q9NY27 417 aa7.65□□□□□ -1.18
SCML1-207ENST00000487842 ANP32BQ92688 251 aaKnown RBP7.65□□□□□ -1.18
SCML1-207ENST00000487842 SALL2Q9Y467 1007 aaPredicted RBP7.64□□□□□ -1.19
SCML1-207ENST00000487842 DDX10Q13206 875 aaKnown RBP7.63□□□□□ -1.19
SCML1-207ENST00000487842 CCER2I3L3R5 266 aa7.63□□□□□ -1.19
SCML1-207ENST00000487842 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.63□□□□□ -1.19
SCML1-207ENST00000487842 TONSLQ96HA7 1378 aa7.63□□□□□ -1.19
SCML1-207ENST00000487842 NEFMP07197 916 aa7.62□□□□□ -1.19
SCML1-207ENST00000487842 TNIKQ9UKE5 1360 aa7.62□□□□□ -1.19
SCML1-207ENST00000487842 CEP162Q5TB80 1403 aa7.62□□□□□ -1.19
SCML1-207ENST00000487842 NPM2Q86SE8 214 aaKnown RBP7.62□□□□□ -1.19
SCML1-207ENST00000487842 FANCIQ9NVI1 1328 aa7.62□□□□□ -1.19
SCML1-207ENST00000487842 FAM50AQ14320 339 aaKnown RBP7.61□□□□□ -1.19
SCML1-207ENST00000487842 TRIM52Q96A61 297 aa7.61□□□□□ -1.19
SCML1-207ENST00000487842 POLR3GLQ9BT43 218 aa7.6□□□□□ -1.19
SCML1-207ENST00000487842 RTN4Q9NQC3 1192 aaKnown RBP7.6□□□□□ -1.19
SCML1-207ENST00000487842 TIMELESSQ9UNS1 1208 aa7.6□□□□□ -1.19
SCML1-207ENST00000487842 GOLGA3Q08378 1498 aa7.59□□□□□ -1.19
SCML1-207ENST00000487842 UPF2Q9HAU5 1272 aaKnown RBP7.59□□□□□ -1.19
SCML1-207ENST00000487842 USP35Q9P2H5 1018 aa7.58□□□□□ -1.2
SCML1-207ENST00000487842 CLIP1P30622 1438 aa7.56□□□□□ -1.2
SCML1-207ENST00000487842 TNNT2P45379 298 aaPredicted RBP7.55□□□□□ -1.2
SCML1-207ENST00000487842 RB1CC1Q8TDY2 1594 aa7.55□□□□□ -1.2
SCML1-207ENST00000487842 BECN1Q14457 450 aa7.55□□□□□ -1.2
SCML1-207ENST00000487842 WRNQ14191 1432 aaPredicted RBP eCLIP7.54□□□□□ -1.2
SCML1-207ENST00000487842 RSPH6AQ9H0K4 717 aa7.54□□□□□ -1.2
SCML1-207ENST00000487842 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms