RNA–Protein interactions for RNA: ENST00000439416.5

AP4M1-208, Transcript of adaptor related protein complex 4 subunit mu 1, humanhuman

TSL 5

Gene AP4M1, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1-208ENST00000439416 NISCHQ9Y2I1 1504 aa34.45■■■■□ 3.11
AP4M1-208ENST00000439416 CCDC180Q9P1Z9 1646 aa30.67■■■□□ 2.5
AP4M1-208ENST00000439416 ABCC9O60706 1549 aa30.07■■■□□ 2.4
AP4M1-208ENST00000439416 RB1CC1Q8TDY2 1594 aa28.84■■■□□ 2.21
AP4M1-208ENST00000439416 NACADO15069 1562 aa28.79■■■□□ 2.2
AP4M1-208ENST00000439416 ZCCHC6Q5VYS8 1495 aaKnown RBP28.72■■■□□ 2.19
AP4M1-208ENST00000439416 DCAF8L2P0C7V8 631 aa28.64■■■□□ 2.18
AP4M1-208ENST00000439416 MYO15BQ96JP2 1530 aa28.6■■■□□ 2.17
AP4M1-208ENST00000439416 DCAF1Q9Y4B6 1507 aa28.48■■■□□ 2.15
AP4M1-208ENST00000439416 UNC13AQ9UPW8 1703 aa28.35■■■□□ 2.13
AP4M1-208ENST00000439416 BICRAQ9NZM4 1560 aa28.11■■■□□ 2.09
AP4M1-208ENST00000439416 PABPN1Q86U42 306 aaKnown RBP eCLIP28.05■■■□□ 2.08
AP4M1-208ENST00000439416 SCRIBQ14160 1630 aa28.02■■■□□ 2.08
AP4M1-208ENST00000439416 DNAJC5BQ9UF47 199 aa27.71■■■□□ 2.03
AP4M1-208ENST00000439416 SHROOM4Q9ULL8 1493 aa27.65■■■□□ 2.02
AP4M1-208ENST00000439416 EIF4G1Q04637 1599 aaKnown RBP27.31■■□□□ 1.96
AP4M1-208ENST00000439416 CC2D2AQ9P2K1 1620 aa27.21■■□□□ 1.95
AP4M1-208ENST00000439416 CECR2Q9BXF3 1484 aa26.99■■□□□ 1.91
AP4M1-208ENST00000439416 SMARCA4P51532 1647 aa26.78■■□□□ 1.88
AP4M1-208ENST00000439416 BAZ1AQ9NRL2 1556 aaPredicted RBP26.67■■□□□ 1.86
AP4M1-208ENST00000439416 ATAD2BQ9ULI0 1458 aa26.62■■□□□ 1.85
AP4M1-208ENST00000439416 MROH2BQ7Z745 1585 aa26.6■■□□□ 1.85
AP4M1-208ENST00000439416 NCAPD3P42695 1498 aa26.58■■□□□ 1.85
AP4M1-208ENST00000439416 SMARCA2P51531 1590 aa26.53■■□□□ 1.84
AP4M1-208ENST00000439416 PEG3Q9GZU2 1588 aa26.51■■□□□ 1.83
AP4M1-208ENST00000439416 HMGXB3Q12766 1538 aa26.47■■□□□ 1.83
AP4M1-208ENST00000439416 BAZ1BQ9UIG0 1483 aaKnown RBP26.36■■□□□ 1.81
AP4M1-208ENST00000439416 WIZO95785 1651 aa26.31■■□□□ 1.8
AP4M1-208ENST00000439416 RSF1Q96T23 1441 aaPredicted RBP26.22■■□□□ 1.79
AP4M1-208ENST00000439416 NESP48681 1621 aa26.05■■□□□ 1.76
AP4M1-208ENST00000439416 TOP2AP11388 1531 aaKnown RBP25.99■■□□□ 1.75
AP4M1-208ENST00000439416 LAMC3Q9Y6N6 1575 aa25.89■■□□□ 1.73
AP4M1-208ENST00000439416 ERCC6Q03468 1493 aa25.83■■□□□ 1.73
AP4M1-208ENST00000439416 CADPSQ9ULU8 1353 aa25.77■■□□□ 1.72
AP4M1-208ENST00000439416 KIF21AQ7Z4S6 1674 aa25.76■■□□□ 1.71
AP4M1-208ENST00000439416 THOC2Q8NI27 1593 aaKnown RBP25.69■■□□□ 1.7
AP4M1-208ENST00000439416 CCDC88BA6NC98 1476 aa25.68■■□□□ 1.7
AP4M1-208ENST00000439416 CFTRP13569 1480 aa25.65■■□□□ 1.7
AP4M1-208ENST00000439416 PDS5BQ9NTI5 1447 aa25.64■■□□□ 1.7
AP4M1-208ENST00000439416 CUX2O14529 1486 aa25.61■■□□□ 1.69
AP4M1-208ENST00000439416 FANCD2Q9BXW9 1451 aa25.51■■□□□ 1.67
AP4M1-208ENST00000439416 PRDM2Q13029 1718 aa25.51■■□□□ 1.67
AP4M1-208ENST00000439416 MRC2Q9UBG0 1479 aa25.47■■□□□ 1.67
AP4M1-208ENST00000439416 CEP164Q9UPV0 1460 aa25.47■■□□□ 1.67
AP4M1-208ENST00000439416 WDR62O43379 1518 aa25.43■■□□□ 1.66
AP4M1-208ENST00000439416 SUPT5HO00267 1087 aaKnown RBP25.4■■□□□ 1.66
AP4M1-208ENST00000439416 URB2Q14146 1524 aaKnown RBP25.33■■□□□ 1.65
AP4M1-208ENST00000439416 TOPBP1Q92547 1522 aa25.13■■□□□ 1.61
AP4M1-208ENST00000439416 DNMBPQ6XZF7 1577 aa25.09■■□□□ 1.61
AP4M1-208ENST00000439416 ABCC8Q09428 1581 aa24.99■■□□□ 1.59
AP4M1-208ENST00000439416 CUX1P39880 1505 aa24.96■■□□□ 1.59
AP4M1-208ENST00000439416 IFT140Q96RY7 1462 aa24.93■■□□□ 1.58
AP4M1-208ENST00000439416 ZNF608Q9ULD9 1512 aaPredicted RBP24.92■■□□□ 1.58
AP4M1-208ENST00000439416 POLA1P09884 1462 aaPredicted RBP24.91■■□□□ 1.58
AP4M1-208ENST00000439416 TARBP1Q13395 1621 aaKnown RBP24.91■■□□□ 1.58
AP4M1-208ENST00000439416 DNAJC5Q9H3Z4 198 aa24.88■■□□□ 1.57
AP4M1-208ENST00000439416 FGD5Q6ZNL6 1462 aa24.84■■□□□ 1.57
AP4M1-208ENST00000439416 RAD54L2Q9Y4B4 1467 aa24.83■■□□□ 1.56
AP4M1-208ENST00000439416 EIF4G3O43432 1585 aaKnown RBP24.82■■□□□ 1.56
AP4M1-208ENST00000439416 SYNJ1O43426 1573 aa24.74■■□□□ 1.55
AP4M1-208ENST00000439416 SOGA1O94964 1423 aa24.73■■□□□ 1.55
AP4M1-208ENST00000439416 WDR97A6NE52 1622 aa24.72■■□□□ 1.55
AP4M1-208ENST00000439416 BIVM-ERCC5R4GMW8 1640 aa24.72■■□□□ 1.55
AP4M1-208ENST00000439416 AQRO60306 1485 aaKnown RBP eCLIP24.71■■□□□ 1.55
AP4M1-208ENST00000439416 TOP2BQ02880 1626 aa24.68■■□□□ 1.54
AP4M1-208ENST00000439416 WRNQ14191 1432 aaPredicted RBP eCLIP24.68■■□□□ 1.54
AP4M1-208ENST00000439416 TDRD9Q8NDG6 1382 aaKnown RBP24.64■■□□□ 1.53
AP4M1-208ENST00000439416 ABCA10Q8WWZ4 1543 aa24.58■■□□□ 1.53
AP4M1-208ENST00000439416 ABCA5Q8WWZ7 1642 aa24.55■■□□□ 1.52
AP4M1-208ENST00000439416 CHD1O14646 1710 aa24.53■■□□□ 1.52
AP4M1-208ENST00000439416 PBRM1Q86U86 1689 aa24.51■■□□□ 1.51
AP4M1-208ENST00000439416 SNAPC4Q5SXM2 1469 aa24.51■■□□□ 1.51
AP4M1-208ENST00000439416 GRIN2BQ13224 1484 aa24.47■■□□□ 1.51
AP4M1-208ENST00000439416 GAPVD1Q14C86 1478 aa24.47■■□□□ 1.51
AP4M1-208ENST00000439416 OSCARQ8IYS5 282 aa24.44■■□□□ 1.5
AP4M1-208ENST00000439416 MAGI1Q96QZ7 1491 aaPredicted RBP24.41■■□□□ 1.5
AP4M1-208ENST00000439416 SYNJ2O15056 1496 aa24.33■■□□□ 1.49
AP4M1-208ENST00000439416 ADAMTS12P58397 1594 aa24.32■■□□□ 1.48
AP4M1-208ENST00000439416 FBLN2P98095 1184 aa24.3■■□□□ 1.48
AP4M1-208ENST00000439416 ERICH3Q5RHP9 1530 aa24.26■■□□□ 1.47
AP4M1-208ENST00000439416 CLASP1Q7Z460 1538 aa24.26■■□□□ 1.47
AP4M1-208ENST00000439416 RIMBP3CA6NJZ7 1639 aa24.24■■□□□ 1.47
AP4M1-208ENST00000439416 RIMBP3BA6NNM3 1639 aa24.24■■□□□ 1.47
AP4M1-208ENST00000439416 RIMBP3Q9UFD9 1639 aa24.24■■□□□ 1.47
AP4M1-208ENST00000439416 CHMP7Q8WUX9 453 aaPredicted RBP24.22■■□□□ 1.47
AP4M1-208ENST00000439416 ARHGEF11O15085 1522 aa24.2■■□□□ 1.46
AP4M1-208ENST00000439416 GRIN2AQ12879 1464 aa24.19■■□□□ 1.46
AP4M1-208ENST00000439416 FHAD1B1AJZ9 1412 aa24.18■■□□□ 1.46
AP4M1-208ENST00000439416 CEP170Q5SW79 1584 aa24.14■■□□□ 1.45
AP4M1-208ENST00000439416 KIF27Q86VH2 1401 aa24.12■■□□□ 1.45
AP4M1-208ENST00000439416 NUP160Q12769 1436 aa24.1■■□□□ 1.45
AP4M1-208ENST00000439416 IGF1RP08069 1367 aa24.09■■□□□ 1.45
AP4M1-208ENST00000439416 RUSC2Q8N2Y8 1516 aa24.05■■□□□ 1.44
AP4M1-208ENST00000439416 ARAP1Q96P48 1450 aa24.04■■□□□ 1.44
AP4M1-208ENST00000439416 CUL7Q14999 1698 aa24.04■■□□□ 1.44
AP4M1-208ENST00000439416 TRIM41Q8WV44 630 aa24.02■■□□□ 1.44
AP4M1-208ENST00000439416 ERCC6L2Q5T890 1561 aa23.98■■□□□ 1.43
AP4M1-208ENST00000439416 SHROOM2Q13796 1616 aa23.97■■□□□ 1.43
AP4M1-208ENST00000439416 CARMIL1Q5VZK9 1371 aa23.91■■□□□ 1.42
AP4M1-208ENST00000439416 CYB5RLQ6IPT4 315 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms