RNA–Protein interactions for RNA: ENST00000482542.5

SFXN5-215, Transcript of sideroflexin 5, humanhuman

TSL 4

Gene SFXN5, Length 546 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-215ENST00000482542 NISCHQ9Y2I1 1504 aa34.99■■■■□ 3.19
SFXN5-215ENST00000482542 ABCC9O60706 1549 aa31.38■■■□□ 2.61
SFXN5-215ENST00000482542 CCDC180Q9P1Z9 1646 aa31.31■■■□□ 2.6
SFXN5-215ENST00000482542 RB1CC1Q8TDY2 1594 aa29.89■■■□□ 2.38
SFXN5-215ENST00000482542 NACADO15069 1562 aa29.71■■■□□ 2.35
SFXN5-215ENST00000482542 DCAF8L2P0C7V8 631 aa29.64■■■□□ 2.34
SFXN5-215ENST00000482542 DNAJC5BQ9UF47 199 aa29.46■■■□□ 2.31
SFXN5-215ENST00000482542 MYO15BQ96JP2 1530 aa29.35■■■□□ 2.29
SFXN5-215ENST00000482542 PABPN1Q86U42 306 aaKnown RBP eCLIP29.27■■■□□ 2.28
SFXN5-215ENST00000482542 UNC13AQ9UPW8 1703 aa28.97■■■□□ 2.23
SFXN5-215ENST00000482542 ZCCHC6Q5VYS8 1495 aaKnown RBP28.97■■■□□ 2.23
SFXN5-215ENST00000482542 DCAF1Q9Y4B6 1507 aa28.94■■■□□ 2.22
SFXN5-215ENST00000482542 BICRAQ9NZM4 1560 aa28.92■■■□□ 2.22
SFXN5-215ENST00000482542 SHROOM4Q9ULL8 1493 aa28.7■■■□□ 2.18
SFXN5-215ENST00000482542 SCRIBQ14160 1630 aa28.51■■■□□ 2.15
SFXN5-215ENST00000482542 CECR2Q9BXF3 1484 aa28.31■■■□□ 2.12
SFXN5-215ENST00000482542 CC2D2AQ9P2K1 1620 aa28.3■■■□□ 2.12
SFXN5-215ENST00000482542 EIF4G1Q04637 1599 aaKnown RBP28.27■■■□□ 2.12
SFXN5-215ENST00000482542 NCAPD3P42695 1498 aa27.46■■□□□ 1.99
SFXN5-215ENST00000482542 ATAD2BQ9ULI0 1458 aa27.34■■□□□ 1.97
SFXN5-215ENST00000482542 SMARCA2P51531 1590 aa27.26■■□□□ 1.96
SFXN5-215ENST00000482542 SMARCA4P51532 1647 aa27.23■■□□□ 1.95
SFXN5-215ENST00000482542 HMGXB3Q12766 1538 aa27.19■■□□□ 1.94
SFXN5-215ENST00000482542 BAZ1AQ9NRL2 1556 aaPredicted RBP27.17■■□□□ 1.94
SFXN5-215ENST00000482542 DNAJC5Q9H3Z4 198 aa27.16■■□□□ 1.94
SFXN5-215ENST00000482542 ERCC6Q03468 1493 aa27.15■■□□□ 1.94
SFXN5-215ENST00000482542 CUX2O14529 1486 aa27.11■■□□□ 1.93
SFXN5-215ENST00000482542 BAZ1BQ9UIG0 1483 aaKnown RBP27.07■■□□□ 1.92
SFXN5-215ENST00000482542 PEG3Q9GZU2 1588 aa27.01■■□□□ 1.91
SFXN5-215ENST00000482542 MROH2BQ7Z745 1585 aa26.92■■□□□ 1.9
SFXN5-215ENST00000482542 NESP48681 1621 aa26.91■■□□□ 1.9
SFXN5-215ENST00000482542 LAMC3Q9Y6N6 1575 aa26.78■■□□□ 1.88
SFXN5-215ENST00000482542 PDS5BQ9NTI5 1447 aa26.73■■□□□ 1.87
SFXN5-215ENST00000482542 CADPSQ9ULU8 1353 aa26.65■■□□□ 1.86
SFXN5-215ENST00000482542 THOC2Q8NI27 1593 aaKnown RBP26.6■■□□□ 1.85
SFXN5-215ENST00000482542 WIZO95785 1651 aa26.52■■□□□ 1.84
SFXN5-215ENST00000482542 KIF21AQ7Z4S6 1674 aa26.47■■□□□ 1.83
SFXN5-215ENST00000482542 RSF1Q96T23 1441 aaPredicted RBP26.42■■□□□ 1.82
SFXN5-215ENST00000482542 MRC2Q9UBG0 1479 aa26.42■■□□□ 1.82
SFXN5-215ENST00000482542 CFTRP13569 1480 aa26.31■■□□□ 1.8
SFXN5-215ENST00000482542 CEP164Q9UPV0 1460 aa26.31■■□□□ 1.8
SFXN5-215ENST00000482542 WDR62O43379 1518 aa26.31■■□□□ 1.8
SFXN5-215ENST00000482542 FANCD2Q9BXW9 1451 aa26.29■■□□□ 1.8
SFXN5-215ENST00000482542 TOP2AP11388 1531 aaKnown RBP26.27■■□□□ 1.8
SFXN5-215ENST00000482542 URB2Q14146 1524 aaKnown RBP26.02■■□□□ 1.76
SFXN5-215ENST00000482542 CCDC88BA6NC98 1476 aa26.01■■□□□ 1.75
SFXN5-215ENST00000482542 OSCARQ8IYS5 282 aa25.97■■□□□ 1.75
SFXN5-215ENST00000482542 TRIM41Q8WV44 630 aa25.92■■□□□ 1.74
SFXN5-215ENST00000482542 IFT140Q96RY7 1462 aa25.83■■□□□ 1.73
SFXN5-215ENST00000482542 PRDM2Q13029 1718 aa25.82■■□□□ 1.72
SFXN5-215ENST00000482542 ABCC8Q09428 1581 aa25.82■■□□□ 1.72
SFXN5-215ENST00000482542 TOPBP1Q92547 1522 aa25.76■■□□□ 1.71
SFXN5-215ENST00000482542 ZNF608Q9ULD9 1512 aaPredicted RBP25.7■■□□□ 1.7
SFXN5-215ENST00000482542 DNMBPQ6XZF7 1577 aa25.65■■□□□ 1.7
SFXN5-215ENST00000482542 AQRO60306 1485 aaKnown RBP eCLIP25.52■■□□□ 1.68
SFXN5-215ENST00000482542 EIF4G3O43432 1585 aaKnown RBP25.51■■□□□ 1.67
SFXN5-215ENST00000482542 POLA1P09884 1462 aaPredicted RBP25.5■■□□□ 1.67
SFXN5-215ENST00000482542 TARBP1Q13395 1621 aaKnown RBP25.48■■□□□ 1.67
SFXN5-215ENST00000482542 SOGA1O94964 1423 aa25.46■■□□□ 1.67
SFXN5-215ENST00000482542 FBLN2P98095 1184 aa25.43■■□□□ 1.66
SFXN5-215ENST00000482542 RIMBP3CA6NJZ7 1639 aa25.41■■□□□ 1.66
SFXN5-215ENST00000482542 RIMBP3BA6NNM3 1639 aa25.41■■□□□ 1.66
SFXN5-215ENST00000482542 RIMBP3Q9UFD9 1639 aa25.41■■□□□ 1.66
SFXN5-215ENST00000482542 ARHGEF11O15085 1522 aa25.4■■□□□ 1.66
SFXN5-215ENST00000482542 RAD54L2Q9Y4B4 1467 aa25.4■■□□□ 1.66
SFXN5-215ENST00000482542 TDRD9Q8NDG6 1382 aaKnown RBP25.39■■□□□ 1.65
SFXN5-215ENST00000482542 FGD5Q6ZNL6 1462 aa25.34■■□□□ 1.65
SFXN5-215ENST00000482542 CYB5RLQ6IPT4 315 aa25.32■■□□□ 1.64
SFXN5-215ENST00000482542 WDR97A6NE52 1622 aa25.3■■□□□ 1.64
SFXN5-215ENST00000482542 SUPT5HO00267 1087 aaKnown RBP25.29■■□□□ 1.64
SFXN5-215ENST00000482542 CUX1P39880 1505 aa25.28■■□□□ 1.64
SFXN5-215ENST00000482542 CHMP7Q8WUX9 453 aaPredicted RBP25.27■■□□□ 1.64
SFXN5-215ENST00000482542 CHD1O14646 1710 aa25.24■■□□□ 1.63
SFXN5-215ENST00000482542 SNAPC4Q5SXM2 1469 aa25.23■■□□□ 1.63
SFXN5-215ENST00000482542 GRIN2BQ13224 1484 aa25.22■■□□□ 1.63
SFXN5-215ENST00000482542 MAGI1Q96QZ7 1491 aaPredicted RBP25.21■■□□□ 1.63
SFXN5-215ENST00000482542 ARAP1Q96P48 1450 aa25.14■■□□□ 1.61
SFXN5-215ENST00000482542 SYNJ2O15056 1496 aa25.13■■□□□ 1.61
SFXN5-215ENST00000482542 GAPVD1Q14C86 1478 aa25.12■■□□□ 1.61
SFXN5-215ENST00000482542 SYNJ1O43426 1573 aa25.1■■□□□ 1.61
SFXN5-215ENST00000482542 ABCA10Q8WWZ4 1543 aa25.08■■□□□ 1.61
SFXN5-215ENST00000482542 CLASP1Q7Z460 1538 aa25.07■■□□□ 1.6
SFXN5-215ENST00000482542 TRHP20396 242 aaPredicted RBP25.05■■□□□ 1.6
SFXN5-215ENST00000482542 WRNQ14191 1432 aaPredicted RBP eCLIP25.04■■□□□ 1.6
SFXN5-215ENST00000482542 ABCA5Q8WWZ7 1642 aa24.95■■□□□ 1.58
SFXN5-215ENST00000482542 PBRM1Q86U86 1689 aa24.93■■□□□ 1.58
SFXN5-215ENST00000482542 TOP2BQ02880 1626 aa24.88■■□□□ 1.57
SFXN5-215ENST00000482542 GRIN2AQ12879 1464 aa24.86■■□□□ 1.57
SFXN5-215ENST00000482542 BIVM-ERCC5R4GMW8 1640 aa24.83■■□□□ 1.57
SFXN5-215ENST00000482542 FHAD1B1AJZ9 1412 aa24.83■■□□□ 1.57
SFXN5-215ENST00000482542 NUP160Q12769 1436 aa24.79■■□□□ 1.56
SFXN5-215ENST00000482542 ADAMTS12P58397 1594 aa24.77■■□□□ 1.56
SFXN5-215ENST00000482542 ERICH3Q5RHP9 1530 aa24.76■■□□□ 1.55
SFXN5-215ENST00000482542 CEP170Q5SW79 1584 aa24.69■■□□□ 1.54
SFXN5-215ENST00000482542 JPH4Q96JJ6 628 aa24.63■■□□□ 1.53
SFXN5-215ENST00000482542 ERCC6L2Q5T890 1561 aa24.63■■□□□ 1.53
SFXN5-215ENST00000482542 SHROOM2Q13796 1616 aa24.59■■□□□ 1.53
SFXN5-215ENST00000482542 PRG4Q92954 1404 aaPredicted RBP24.58■■□□□ 1.53
SFXN5-215ENST00000482542 KIF27Q86VH2 1401 aa24.52■■□□□ 1.52
SFXN5-215ENST00000482542 IGF1RP08069 1367 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms