RNA–Protein interactions for RNA: ENST00000249786.8

SERF2-201, Transcript of small EDRK-rich factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF2-201ENST00000249786 NISCHQ9Y2I1 1504 aa34.84■■■■□ 3.17
SERF2-201ENST00000249786 ABCC9O60706 1549 aa31.47■■■□□ 2.63
SERF2-201ENST00000249786 CCDC180Q9P1Z9 1646 aa31.34■■■□□ 2.61
SERF2-201ENST00000249786 RB1CC1Q8TDY2 1594 aa29.89■■■□□ 2.38
SERF2-201ENST00000249786 NACADO15069 1562 aa29.64■■■□□ 2.34
SERF2-201ENST00000249786 DNAJC5BQ9UF47 199 aa29.63■■■□□ 2.33
SERF2-201ENST00000249786 DCAF8L2P0C7V8 631 aa29.42■■■□□ 2.3
SERF2-201ENST00000249786 PABPN1Q86U42 306 aaKnown RBP eCLIP29.25■■■□□ 2.27
SERF2-201ENST00000249786 UNC13AQ9UPW8 1703 aa29.22■■■□□ 2.27
SERF2-201ENST00000249786 MYO15BQ96JP2 1530 aa29.2■■■□□ 2.26
SERF2-201ENST00000249786 BICRAQ9NZM4 1560 aa29.04■■■□□ 2.24
SERF2-201ENST00000249786 ZCCHC6Q5VYS8 1495 aaKnown RBP28.86■■■□□ 2.21
SERF2-201ENST00000249786 DCAF1Q9Y4B6 1507 aa28.77■■■□□ 2.2
SERF2-201ENST00000249786 SHROOM4Q9ULL8 1493 aa28.63■■■□□ 2.17
SERF2-201ENST00000249786 SCRIBQ14160 1630 aa28.54■■■□□ 2.16
SERF2-201ENST00000249786 CC2D2AQ9P2K1 1620 aa28.42■■■□□ 2.14
SERF2-201ENST00000249786 CECR2Q9BXF3 1484 aa28.36■■■□□ 2.13
SERF2-201ENST00000249786 EIF4G1Q04637 1599 aaKnown RBP28.33■■■□□ 2.13
SERF2-201ENST00000249786 NCAPD3P42695 1498 aa27.37■■□□□ 1.97
SERF2-201ENST00000249786 DNAJC5Q9H3Z4 198 aa27.31■■□□□ 1.96
SERF2-201ENST00000249786 ATAD2BQ9ULI0 1458 aa27.27■■□□□ 1.96
SERF2-201ENST00000249786 SMARCA4P51532 1647 aa27.21■■□□□ 1.95
SERF2-201ENST00000249786 SMARCA2P51531 1590 aa27.19■■□□□ 1.94
SERF2-201ENST00000249786 CUX2O14529 1486 aa27.18■■□□□ 1.94
SERF2-201ENST00000249786 ERCC6Q03468 1493 aa27.17■■□□□ 1.94
SERF2-201ENST00000249786 HMGXB3Q12766 1538 aa27.16■■□□□ 1.94
SERF2-201ENST00000249786 BAZ1AQ9NRL2 1556 aaPredicted RBP27.05■■□□□ 1.92
SERF2-201ENST00000249786 NESP48681 1621 aa26.99■■□□□ 1.91
SERF2-201ENST00000249786 BAZ1BQ9UIG0 1483 aaKnown RBP26.99■■□□□ 1.91
SERF2-201ENST00000249786 PEG3Q9GZU2 1588 aa26.96■■□□□ 1.91
SERF2-201ENST00000249786 MROH2BQ7Z745 1585 aa26.85■■□□□ 1.89
SERF2-201ENST00000249786 LAMC3Q9Y6N6 1575 aa26.78■■□□□ 1.88
SERF2-201ENST00000249786 THOC2Q8NI27 1593 aaKnown RBP26.77■■□□□ 1.88
SERF2-201ENST00000249786 KIF21AQ7Z4S6 1674 aa26.65■■□□□ 1.86
SERF2-201ENST00000249786 PDS5BQ9NTI5 1447 aa26.62■■□□□ 1.85
SERF2-201ENST00000249786 CADPSQ9ULU8 1353 aa26.52■■□□□ 1.84
SERF2-201ENST00000249786 WIZO95785 1651 aa26.52■■□□□ 1.84
SERF2-201ENST00000249786 MRC2Q9UBG0 1479 aa26.41■■□□□ 1.82
SERF2-201ENST00000249786 WDR62O43379 1518 aa26.36■■□□□ 1.81
SERF2-201ENST00000249786 CEP164Q9UPV0 1460 aa26.28■■□□□ 1.8
SERF2-201ENST00000249786 FANCD2Q9BXW9 1451 aa26.23■■□□□ 1.79
SERF2-201ENST00000249786 RSF1Q96T23 1441 aaPredicted RBP26.23■■□□□ 1.79
SERF2-201ENST00000249786 CFTRP13569 1480 aa26.21■■□□□ 1.79
SERF2-201ENST00000249786 TOP2AP11388 1531 aaKnown RBP26.18■■□□□ 1.78
SERF2-201ENST00000249786 TRIM41Q8WV44 630 aa26.04■■□□□ 1.76
SERF2-201ENST00000249786 URB2Q14146 1524 aaKnown RBP26.03■■□□□ 1.76
SERF2-201ENST00000249786 PRDM2Q13029 1718 aa25.94■■□□□ 1.74
SERF2-201ENST00000249786 OSCARQ8IYS5 282 aa25.88■■□□□ 1.73
SERF2-201ENST00000249786 CCDC88BA6NC98 1476 aa25.87■■□□□ 1.73
SERF2-201ENST00000249786 IFT140Q96RY7 1462 aa25.76■■□□□ 1.71
SERF2-201ENST00000249786 ZNF608Q9ULD9 1512 aaPredicted RBP25.74■■□□□ 1.71
SERF2-201ENST00000249786 TOPBP1Q92547 1522 aa25.72■■□□□ 1.71
SERF2-201ENST00000249786 ABCC8Q09428 1581 aa25.64■■□□□ 1.7
SERF2-201ENST00000249786 DNMBPQ6XZF7 1577 aa25.62■■□□□ 1.69
SERF2-201ENST00000249786 RIMBP3CA6NJZ7 1639 aa25.6■■□□□ 1.69
SERF2-201ENST00000249786 RIMBP3BA6NNM3 1639 aa25.6■■□□□ 1.69
SERF2-201ENST00000249786 RIMBP3Q9UFD9 1639 aa25.6■■□□□ 1.69
SERF2-201ENST00000249786 EIF4G3O43432 1585 aaKnown RBP25.6■■□□□ 1.69
SERF2-201ENST00000249786 TARBP1Q13395 1621 aaKnown RBP25.52■■□□□ 1.68
SERF2-201ENST00000249786 ARHGEF11O15085 1522 aa25.51■■□□□ 1.67
SERF2-201ENST00000249786 AQRO60306 1485 aaKnown RBP eCLIP25.47■■□□□ 1.674e-9■■■■■ 47.1
SERF2-201ENST00000249786 POLA1P09884 1462 aaPredicted RBP25.45■■□□□ 1.67
SERF2-201ENST00000249786 CHD1O14646 1710 aa25.42■■□□□ 1.66
SERF2-201ENST00000249786 RAD54L2Q9Y4B4 1467 aa25.36■■□□□ 1.65
SERF2-201ENST00000249786 SOGA1O94964 1423 aa25.32■■□□□ 1.64
SERF2-201ENST00000249786 FBLN2P98095 1184 aa25.31■■□□□ 1.64
SERF2-201ENST00000249786 CYB5RLQ6IPT4 315 aa25.3■■□□□ 1.64
SERF2-201ENST00000249786 TDRD9Q8NDG6 1382 aaKnown RBP25.29■■□□□ 1.64
SERF2-201ENST00000249786 FGD5Q6ZNL6 1462 aa25.27■■□□□ 1.64
SERF2-201ENST00000249786 ARAP1Q96P48 1450 aa25.25■■□□□ 1.63
SERF2-201ENST00000249786 WDR97A6NE52 1622 aa25.24■■□□□ 1.63
SERF2-201ENST00000249786 CUX1P39880 1505 aa25.23■■□□□ 1.63
SERF2-201ENST00000249786 SNAPC4Q5SXM2 1469 aa25.22■■□□□ 1.63
SERF2-201ENST00000249786 MAGI1Q96QZ7 1491 aaPredicted RBP25.14■■□□□ 1.62
SERF2-201ENST00000249786 CLASP1Q7Z460 1538 aa25.14■■□□□ 1.61
SERF2-201ENST00000249786 GRIN2BQ13224 1484 aa25.13■■□□□ 1.61
SERF2-201ENST00000249786 CHMP7Q8WUX9 453 aaPredicted RBP25.11■■□□□ 1.61
SERF2-201ENST00000249786 SYNJ1O43426 1573 aa25.1■■□□□ 1.61
SERF2-201ENST00000249786 SYNJ2O15056 1496 aa25.06■■□□□ 1.6
SERF2-201ENST00000249786 TRHP20396 242 aaPredicted RBP25.06■■□□□ 1.6
SERF2-201ENST00000249786 PBRM1Q86U86 1689 aa25.03■■□□□ 1.6
SERF2-201ENST00000249786 GAPVD1Q14C86 1478 aa25.01■■□□□ 1.59
SERF2-201ENST00000249786 ABCA10Q8WWZ4 1543 aa24.98■■□□□ 1.59
SERF2-201ENST00000249786 ABCA5Q8WWZ7 1642 aa24.97■■□□□ 1.59
SERF2-201ENST00000249786 SUPT5HO00267 1087 aaKnown RBP24.93■■□□□ 1.58
SERF2-201ENST00000249786 WRNQ14191 1432 aaPredicted RBP eCLIP24.83■■□□□ 1.57
SERF2-201ENST00000249786 GRIN2AQ12879 1464 aa24.81■■□□□ 1.56
SERF2-201ENST00000249786 BIVM-ERCC5R4GMW8 1640 aa24.8■■□□□ 1.56
SERF2-201ENST00000249786 ADAMTS12P58397 1594 aa24.79■■□□□ 1.56
SERF2-201ENST00000249786 TOP2BQ02880 1626 aa24.78■■□□□ 1.56
SERF2-201ENST00000249786 CEP170Q5SW79 1584 aa24.74■■□□□ 1.55
SERF2-201ENST00000249786 ERCC6L2Q5T890 1561 aa24.74■■□□□ 1.55
SERF2-201ENST00000249786 NUP160Q12769 1436 aa24.73■■□□□ 1.55
SERF2-201ENST00000249786 FHAD1B1AJZ9 1412 aa24.69■■□□□ 1.54
SERF2-201ENST00000249786 ERICH3Q5RHP9 1530 aa24.66■■□□□ 1.54
SERF2-201ENST00000249786 SHROOM2Q13796 1616 aa24.65■■□□□ 1.54
SERF2-201ENST00000249786 PRG4Q92954 1404 aaPredicted RBP24.49■■□□□ 1.51
SERF2-201ENST00000249786 JPH4Q96JJ6 628 aa24.45■■□□□ 1.51
SERF2-201ENST00000249786 RUSC2Q8N2Y8 1516 aa24.45■■□□□ 1.5
SERF2-201ENST00000249786 AEBP2Q6ZN18 517 aaPredicted RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms