RNA–Protein interactions for RNA: ENST00000504015.2

ALYREF-201, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 254 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-201ENST00000504015 NISCHQ9Y2I1 1504 aa8.23□□□□□ -1.09
ALYREF-201ENST00000504015 CCDC180Q9P1Z9 1646 aa7.12□□□□□ -1.27
ALYREF-201ENST00000504015 DNAJC5Q9H3Z4 198 aa7.02□□□□□ -1.29
ALYREF-201ENST00000504015 ZCCHC6Q5VYS8 1495 aaKnown RBP6.95□□□□□ -1.3
ALYREF-201ENST00000504015 DCAF1Q9Y4B6 1507 aa6.86□□□□□ -1.31
ALYREF-201ENST00000504015 DNAJC5BQ9UF47 199 aa6.86□□□□□ -1.31
ALYREF-201ENST00000504015 SHROOM4Q9ULL8 1493 aa6.76□□□□□ -1.33
ALYREF-201ENST00000504015 MYO15BQ96JP2 1530 aa6.71□□□□□ -1.33
ALYREF-201ENST00000504015 SUPT5HO00267 1087 aaKnown RBP6.65□□□□□ -1.34
ALYREF-201ENST00000504015 DCAF8L2P0C7V8 631 aa6.64□□□□□ -1.35
ALYREF-201ENST00000504015 NACADO15069 1562 aa6.57□□□□□ -1.36
ALYREF-201ENST00000504015 ABCC9O60706 1549 aa6.55□□□□□ -1.36
ALYREF-201ENST00000504015 CHIC1Q5VXU3 224 aa6.52□□□□□ -1.37
ALYREF-201ENST00000504015 SCRIBQ14160 1630 aa6.48□□□□□ -1.37
ALYREF-201ENST00000504015 RSF1Q96T23 1441 aaPredicted RBP6.45□□□□□ -1.38
ALYREF-201ENST00000504015 RB1CC1Q8TDY2 1594 aa6.44□□□□□ -1.38
ALYREF-201ENST00000504015 BAZ1AQ9NRL2 1556 aaPredicted RBP6.35□□□□□ -1.39
ALYREF-201ENST00000504015 MROH2BQ7Z745 1585 aa6.34□□□□□ -1.39
ALYREF-201ENST00000504015 CECR2Q9BXF3 1484 aa6.32□□□□□ -1.4
ALYREF-201ENST00000504015 WIZO95785 1651 aa6.3□□□□□ -1.4
ALYREF-201ENST00000504015 TRIM41Q8WV44 630 aa6.29□□□□□ -1.4
ALYREF-201ENST00000504015 UNC13AQ9UPW8 1703 aa6.29□□□□□ -1.4
ALYREF-201ENST00000504015 HRCP23327 699 aa6.27□□□□□ -1.41
ALYREF-201ENST00000504015 SMARCA4P51532 1647 aa6.27□□□□□ -1.41
ALYREF-201ENST00000504015 TOP2AP11388 1531 aaKnown RBP6.26□□□□□ -1.41
ALYREF-201ENST00000504015 EIF4G1Q04637 1599 aaKnown RBP6.24□□□□□ -1.41
ALYREF-201ENST00000504015 LOC105371045A0A1W2PR82 267 aa6.24□□□□□ -1.41
ALYREF-201ENST00000504015 TRIM26Q12899 539 aaPredicted RBP6.23□□□□□ -1.41
ALYREF-201ENST00000504015 ILDR1Q86SU0 546 aaPredicted RBP6.23□□□□□ -1.41
ALYREF-201ENST00000504015 PEG3Q9GZU2 1588 aa6.23□□□□□ -1.41
ALYREF-201ENST00000504015 PCGF6Q9BYE7 350 aa6.21□□□□□ -1.42
ALYREF-201ENST00000504015 BICRAQ9NZM4 1560 aa6.21□□□□□ -1.42
ALYREF-201ENST00000504015 SMARCA2P51531 1590 aa6.2□□□□□ -1.42
ALYREF-201ENST00000504015 CCDC88BA6NC98 1476 aa6.19□□□□□ -1.42
ALYREF-201ENST00000504015 EEA1Q15075 1411 aa6.17□□□□□ -1.42
ALYREF-201ENST00000504015 AEBP2Q6ZN18 517 aaPredicted RBP6.16□□□□□ -1.42
ALYREF-201ENST00000504015 ZEB1P37275 1124 aaPredicted RBP6.15□□□□□ -1.42
ALYREF-201ENST00000504015 FAM9AQ8IZU1 332 aaPredicted RBP6.11□□□□□ -1.43
ALYREF-201ENST00000504015 ATAD2BQ9ULI0 1458 aa6.1□□□□□ -1.43
ALYREF-201ENST00000504015 ABCC8Q09428 1581 aa6.1□□□□□ -1.43
ALYREF-201ENST00000504015 WRNQ14191 1432 aaPredicted RBP eCLIP6.09□□□□□ -1.43
ALYREF-201ENST00000504015 BAZ1BQ9UIG0 1483 aaKnown RBP6.09□□□□□ -1.44
ALYREF-201ENST00000504015 TNIKQ9UKE5 1360 aa6.08□□□□□ -1.44
ALYREF-201ENST00000504015 PABPN1Q86U42 306 aaKnown RBP eCLIP6.07□□□□□ -1.44
ALYREF-201ENST00000504015 HMGXB3Q12766 1538 aa6.06□□□□□ -1.44
ALYREF-201ENST00000504015 CSRNP3Q8WYN3 585 aa6.06□□□□□ -1.44
ALYREF-201ENST00000504015 GOLGA3Q08378 1498 aa6.05□□□□□ -1.44
ALYREF-201ENST00000504015 KIF21BO75037 1637 aa6.05□□□□□ -1.44
ALYREF-201ENST00000504015 NCAPD3P42695 1498 aa6.04□□□□□ -1.44
ALYREF-201ENST00000504015 CEP164Q9UPV0 1460 aa6.03□□□□□ -1.44
ALYREF-201ENST00000504015 SOGA1O94964 1423 aa6.03□□□□□ -1.44
ALYREF-201ENST00000504015 CEP162Q5TB80 1403 aa6.02□□□□□ -1.45
ALYREF-201ENST00000504015 TOP2BQ02880 1626 aa6.02□□□□□ -1.45
ALYREF-201ENST00000504015 BIVM-ERCC5R4GMW8 1640 aa6.02□□□□□ -1.45
ALYREF-201ENST00000504015 SYNJ1O43426 1573 aa6.01□□□□□ -1.45
ALYREF-201ENST00000504015 PPARGC1BQ86YN6 1023 aaKnown RBP5.99□□□□□ -1.45
ALYREF-201ENST00000504015 RUSC2Q8N2Y8 1516 aa5.99□□□□□ -1.45
ALYREF-201ENST00000504015 PRDM2Q13029 1718 aa5.98□□□□□ -1.45
ALYREF-201ENST00000504015 UBTFP17480 764 aaKnown RBP5.97□□□□□ -1.45
ALYREF-201ENST00000504015 ERICH3Q5RHP9 1530 aa5.97□□□□□ -1.45
ALYREF-201ENST00000504015 CUX2O14529 1486 aa5.96□□□□□ -1.45
ALYREF-201ENST00000504015 CFTRP13569 1480 aa5.96□□□□□ -1.46
ALYREF-201ENST00000504015 EHMT2Q96KQ7 1210 aa5.95□□□□□ -1.46
ALYREF-201ENST00000504015 CLIP1P30622 1438 aa5.94□□□□□ -1.46
ALYREF-201ENST00000504015 VPS8Q8N3P4 1428 aa5.93□□□□□ -1.46
ALYREF-201ENST00000504015 PRXQ9BXM0 1461 aa5.93□□□□□ -1.46
ALYREF-201ENST00000504015 KIF27Q86VH2 1401 aa5.91□□□□□ -1.46
ALYREF-201ENST00000504015 CUX1P39880 1505 aa5.91□□□□□ -1.46
ALYREF-201ENST00000504015 CCER1Q8TC90 406 aaPredicted RBP5.91□□□□□ -1.46
ALYREF-201ENST00000504015 RAPGEF2Q9Y4G8 1499 aa5.9□□□□□ -1.46
ALYREF-201ENST00000504015 APLP2Q06481 763 aa5.89□□□□□ -1.47
ALYREF-201ENST00000504015 CADPSQ9ULU8 1353 aa5.89□□□□□ -1.47
ALYREF-201ENST00000504015 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.86□□□□□ -1.47
ALYREF-201ENST00000504015 CC2D2AQ9P2K1 1620 aa5.85□□□□□ -1.47
ALYREF-201ENST00000504015 MAP3K1Q13233 1512 aa5.85□□□□□ -1.47
ALYREF-201ENST00000504015 LMTK3Q96Q04 1460 aa5.85□□□□□ -1.47
ALYREF-201ENST00000504015 CLSPNQ9HAW4 1339 aa5.85□□□□□ -1.47
ALYREF-201ENST00000504015 ARAP1Q96P48 1450 aa5.83□□□□□ -1.48
ALYREF-201ENST00000504015 SOCS7O14512 581 aa5.83□□□□□ -1.48
ALYREF-201ENST00000504015 DNMBPQ6XZF7 1577 aa5.82□□□□□ -1.48
ALYREF-201ENST00000504015 LAMC3Q9Y6N6 1575 aa5.82□□□□□ -1.48
ALYREF-201ENST00000504015 IGF1RP08069 1367 aa5.81□□□□□ -1.48
ALYREF-201ENST00000504015 FGD5Q6ZNL6 1462 aa5.81□□□□□ -1.48
ALYREF-201ENST00000504015 FANCD2Q9BXW9 1451 aa5.81□□□□□ -1.48
ALYREF-201ENST00000504015 CUL7Q14999 1698 aa5.8□□□□□ -1.48
ALYREF-201ENST00000504015 ARHGAP35Q9NRY4 1499 aa5.8□□□□□ -1.48
ALYREF-201ENST00000504015 RRBP1Q9P2E9 1410 aaKnown RBP5.8□□□□□ -1.48
ALYREF-201ENST00000504015 CARMIL1Q5VZK9 1371 aa5.8□□□□□ -1.48
ALYREF-201ENST00000504015 ABCA10Q8WWZ4 1543 aa5.79□□□□□ -1.48
ALYREF-201ENST00000504015 ZNF316A6NFI3 1004 aaPredicted RBP5.79□□□□□ -1.48
ALYREF-201ENST00000504015 FHAD1B1AJZ9 1412 aa5.79□□□□□ -1.48
ALYREF-201ENST00000504015 EFCAB5A4FU69 1503 aa5.79□□□□□ -1.48
ALYREF-201ENST00000504015 DIEXFQ68CQ4 756 aaKnown RBP5.78□□□□□ -1.48
ALYREF-201ENST00000504015 TOPBP1Q92547 1522 aa5.77□□□□□ -1.49
ALYREF-201ENST00000504015 AQRO60306 1485 aaKnown RBP eCLIP5.77□□□□□ -1.494e-9■■■□□ 15.4
ALYREF-201ENST00000504015 TTBK1Q5TCY1 1321 aaPredicted RBP5.76□□□□□ -1.49
ALYREF-201ENST00000504015 TIAM1Q13009 1591 aa5.76□□□□□ -1.49
ALYREF-201ENST00000504015 HNRNPUL2Q1KMD3 747 aaKnown RBP5.76□□□□□ -1.49
ALYREF-201ENST00000504015 CFAP43Q8NDM7 1665 aa5.75□□□□□ -1.49
ALYREF-201ENST00000504015 CTTNBP2Q8WZ74 1663 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms