RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 NISCHQ9Y2I1 1504 aa33.96■■■■□ 3.03
MAP1LC3B-201ENST00000268607 CCDC180Q9P1Z9 1646 aa29.25■■■□□ 2.27
MAP1LC3B-201ENST00000268607 DCAF8L2P0C7V8 631 aa28.89■■■□□ 2.22
MAP1LC3B-201ENST00000268607 ZCCHC6Q5VYS8 1495 aaKnown RBP28.45■■■□□ 2.15
MAP1LC3B-201ENST00000268607 SHROOM4Q9ULL8 1493 aa28.45■■■□□ 2.14
MAP1LC3B-201ENST00000268607 ABCC9O60706 1549 aa28.42■■■□□ 2.14
MAP1LC3B-201ENST00000268607 DCAF1Q9Y4B6 1507 aa27.7■■■□□ 2.02
MAP1LC3B-201ENST00000268607 SCRIBQ14160 1630 aa27.47■■□□□ 1.99
MAP1LC3B-201ENST00000268607 SUPT5HO00267 1087 aaKnown RBP27.45■■□□□ 1.98
MAP1LC3B-201ENST00000268607 NACADO15069 1562 aa27.38■■□□□ 1.97
MAP1LC3B-201ENST00000268607 MYO15BQ96JP2 1530 aa27.29■■□□□ 1.96
MAP1LC3B-201ENST00000268607 RB1CC1Q8TDY2 1594 aa27.23■■□□□ 1.95
MAP1LC3B-201ENST00000268607 PABPN1Q86U42 306 aaKnown RBP eCLIP27.04■■□□□ 1.92
MAP1LC3B-201ENST00000268607 UNC13AQ9UPW8 1703 aa26.81■■□□□ 1.88
MAP1LC3B-201ENST00000268607 CECR2Q9BXF3 1484 aa26.71■■□□□ 1.87
MAP1LC3B-201ENST00000268607 HRCP23327 699 aa26.56■■□□□ 1.84
MAP1LC3B-201ENST00000268607 BICRAQ9NZM4 1560 aa26.56■■□□□ 1.84
MAP1LC3B-201ENST00000268607 RSF1Q96T23 1441 aaPredicted RBP26.49■■□□□ 1.83
MAP1LC3B-201ENST00000268607 MROH2BQ7Z745 1585 aa26.43■■□□□ 1.82
MAP1LC3B-201ENST00000268607 CHIC1Q5VXU3 224 aa26.39■■□□□ 1.82
MAP1LC3B-201ENST00000268607 WIZO95785 1651 aa26.23■■□□□ 1.79
MAP1LC3B-201ENST00000268607 BAZ1AQ9NRL2 1556 aaPredicted RBP26.13■■□□□ 1.77
MAP1LC3B-201ENST00000268607 PCGF6Q9BYE7 350 aa26.12■■□□□ 1.77
MAP1LC3B-201ENST00000268607 SMARCA4P51532 1647 aa26.08■■□□□ 1.77
MAP1LC3B-201ENST00000268607 PPARGC1BQ86YN6 1023 aaKnown RBP26.08■■□□□ 1.77
MAP1LC3B-201ENST00000268607 PELP1Q8IZL8 1130 aaKnown RBP26.01■■□□□ 1.75
MAP1LC3B-201ENST00000268607 EIF4G1Q04637 1599 aaKnown RBP25.77■■□□□ 1.72
MAP1LC3B-201ENST00000268607 ATAD2BQ9ULI0 1458 aa25.74■■□□□ 1.71
MAP1LC3B-201ENST00000268607 LOC105371045A0A1W2PR82 267 aa25.71■■□□□ 1.71
MAP1LC3B-201ENST00000268607 TOP2AP11388 1531 aaKnown RBP25.68■■□□□ 1.7
MAP1LC3B-201ENST00000268607 CCDC88BA6NC98 1476 aa25.66■■□□□ 1.7
MAP1LC3B-201ENST00000268607 BAZ1BQ9UIG0 1483 aaKnown RBP25.62■■□□□ 1.69
MAP1LC3B-201ENST00000268607 SMARCA2P51531 1590 aa25.55■■□□□ 1.68
MAP1LC3B-201ENST00000268607 PEG3Q9GZU2 1588 aa25.54■■□□□ 1.68
MAP1LC3B-201ENST00000268607 TRIM41Q8WV44 630 aa25.53■■□□□ 1.68
MAP1LC3B-201ENST00000268607 CC2D2AQ9P2K1 1620 aa25.46■■□□□ 1.67
MAP1LC3B-201ENST00000268607 DNAJC5BQ9UF47 199 aa25.46■■□□□ 1.67
MAP1LC3B-201ENST00000268607 FAM9AQ8IZU1 332 aaPredicted RBP25.42■■□□□ 1.66
MAP1LC3B-201ENST00000268607 NCAPD3P42695 1498 aa25.39■■□□□ 1.65
MAP1LC3B-201ENST00000268607 SCAF1Q9H7N4 1312 aaKnown RBP25.34■■□□□ 1.65
MAP1LC3B-201ENST00000268607 EHMT2Q96KQ7 1210 aa25.34■■□□□ 1.65
MAP1LC3B-201ENST00000268607 ABCC8Q09428 1581 aa25.29■■□□□ 1.64
MAP1LC3B-201ENST00000268607 TRIM26Q12899 539 aaPredicted RBP25.28■■□□□ 1.64
MAP1LC3B-201ENST00000268607 HMGXB3Q12766 1538 aa25.22■■□□□ 1.63
MAP1LC3B-201ENST00000268607 MYT1Q01538 1121 aa25.05■■□□□ 1.6
MAP1LC3B-201ENST00000268607 ZEB1P37275 1124 aaPredicted RBP24.99■■□□□ 1.59
MAP1LC3B-201ENST00000268607 NESP48681 1621 aa24.96■■□□□ 1.59
MAP1LC3B-201ENST00000268607 WRNQ14191 1432 aaPredicted RBP eCLIP24.92■■□□□ 1.58
MAP1LC3B-201ENST00000268607 CADPSQ9ULU8 1353 aa24.89■■□□□ 1.58
MAP1LC3B-201ENST00000268607 CFTRP13569 1480 aa24.89■■□□□ 1.57
MAP1LC3B-201ENST00000268607 SOGA1O94964 1423 aa24.84■■□□□ 1.57
MAP1LC3B-201ENST00000268607 SYNJ1O43426 1573 aa24.84■■□□□ 1.57
MAP1LC3B-201ENST00000268607 RUSC2Q8N2Y8 1516 aa24.81■■□□□ 1.56
MAP1LC3B-201ENST00000268607 FANCD2Q9BXW9 1451 aa24.65■■□□□ 1.54
MAP1LC3B-201ENST00000268607 CUX1P39880 1505 aa24.65■■□□□ 1.54
MAP1LC3B-201ENST00000268607 ACIN1Q9UKV3 1341 aaKnown RBP24.58■■□□□ 1.53
MAP1LC3B-201ENST00000268607 CSRNP3Q8WYN3 585 aa24.55■■□□□ 1.52
MAP1LC3B-201ENST00000268607 NEUROD1Q13562 356 aa24.54■■□□□ 1.52
MAP1LC3B-201ENST00000268607 TOP2BQ02880 1626 aa24.54■■□□□ 1.52
MAP1LC3B-201ENST00000268607 RANGAP1P46060 587 aaPredicted RBP24.49■■□□□ 1.51
MAP1LC3B-201ENST00000268607 PRDM2Q13029 1718 aa24.47■■□□□ 1.51
MAP1LC3B-201ENST00000268607 UBTFP17480 764 aaKnown RBP24.46■■□□□ 1.51
MAP1LC3B-201ENST00000268607 LAMC3Q9Y6N6 1575 aa24.46■■□□□ 1.51
MAP1LC3B-201ENST00000268607 GTF3C3Q9Y5Q9 886 aa24.44■■□□□ 1.5
MAP1LC3B-201ENST00000268607 CEP164Q9UPV0 1460 aa24.43■■□□□ 1.5
MAP1LC3B-201ENST00000268607 BIVM-ERCC5R4GMW8 1640 aa24.42■■□□□ 1.5
MAP1LC3B-201ENST00000268607 PDS5BQ9NTI5 1447 aa24.41■■□□□ 1.5
MAP1LC3B-201ENST00000268607 FGD5Q6ZNL6 1462 aa24.41■■□□□ 1.5
MAP1LC3B-201ENST00000268607 KIF21AQ7Z4S6 1674 aa24.4■■□□□ 1.5
MAP1LC3B-201ENST00000268607 RAD54L2Q9Y4B4 1467 aa24.39■■□□□ 1.5
MAP1LC3B-201ENST00000268607 URB2Q14146 1524 aaKnown RBP24.36■■□□□ 1.49
MAP1LC3B-201ENST00000268607 TTBK1Q5TCY1 1321 aaPredicted RBP24.36■■□□□ 1.49
MAP1LC3B-201ENST00000268607 TOPBP1Q92547 1522 aa24.34■■□□□ 1.49
MAP1LC3B-201ENST00000268607 CUX2O14529 1486 aa24.31■■□□□ 1.48
MAP1LC3B-201ENST00000268607 CEP162Q5TB80 1403 aa24.28■■□□□ 1.48
MAP1LC3B-201ENST00000268607 POLA1P09884 1462 aaPredicted RBP24.27■■□□□ 1.48
MAP1LC3B-201ENST00000268607 EEA1Q15075 1411 aa24.27■■□□□ 1.48
MAP1LC3B-201ENST00000268607 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.27■■□□□ 1.48
MAP1LC3B-201ENST00000268607 ERCC6Q03468 1493 aa24.24■■□□□ 1.47
MAP1LC3B-201ENST00000268607 DNMBPQ6XZF7 1577 aa24.24■■□□□ 1.47
MAP1LC3B-201ENST00000268607 RAPGEF2Q9Y4G8 1499 aa24.24■■□□□ 1.47
MAP1LC3B-201ENST00000268607 TNIKQ9UKE5 1360 aa24.23■■□□□ 1.47
MAP1LC3B-201ENST00000268607 TDRD9Q8NDG6 1382 aaKnown RBP24.23■■□□□ 1.47
MAP1LC3B-201ENST00000268607 KIF27Q86VH2 1401 aa24.22■■□□□ 1.47
MAP1LC3B-201ENST00000268607 CCER1Q8TC90 406 aaPredicted RBP24.19■■□□□ 1.46
MAP1LC3B-201ENST00000268607 CENPBP07199 599 aaPredicted RBP24.18■■□□□ 1.46
MAP1LC3B-201ENST00000268607 DIEXFQ68CQ4 756 aaKnown RBP24.16■■□□□ 1.46
MAP1LC3B-201ENST00000268607 GOLGA3Q08378 1498 aa24.16■■□□□ 1.46
MAP1LC3B-201ENST00000268607 IGF1RP08069 1367 aa24.13■■□□□ 1.45
MAP1LC3B-201ENST00000268607 MRC2Q9UBG0 1479 aa24.08■■□□□ 1.45
MAP1LC3B-201ENST00000268607 AQRO60306 1485 aaKnown RBP eCLIP24.03■■□□□ 1.444e-6■■■■■ 31
MAP1LC3B-201ENST00000268607 PRXQ9BXM0 1461 aa24.02■■□□□ 1.44
MAP1LC3B-201ENST00000268607 CARMIL1Q5VZK9 1371 aa24.01■■□□□ 1.43
MAP1LC3B-201ENST00000268607 ABCA10Q8WWZ4 1543 aa24.01■■□□□ 1.43
MAP1LC3B-201ENST00000268607 KIF21BO75037 1637 aa23.99■■□□□ 1.43
MAP1LC3B-201ENST00000268607 ZNF608Q9ULD9 1512 aaPredicted RBP23.97■■□□□ 1.43
MAP1LC3B-201ENST00000268607 CLIP1P30622 1438 aa23.92■■□□□ 1.42
MAP1LC3B-201ENST00000268607 GAPVD1Q14C86 1478 aa23.92■■□□□ 1.42
MAP1LC3B-201ENST00000268607 P3H3Q8IVL6 736 aa23.91■■□□□ 1.42
MAP1LC3B-201ENST00000268607 TARBP1Q13395 1621 aaKnown RBP23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms