RNA–Protein interactions for RNA: ENST00000409960.6

SERF2-210, Transcript of small EDRK-rich factor 2, humanhuman

TSL 1 (best) BASIC

Gene SERF2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF2-210ENST00000409960 NISCHQ9Y2I1 1504 aa29.59■■■□□ 2.33
SERF2-210ENST00000409960 AEBP2Q6ZN18 517 aaPredicted RBP27.78■■■□□ 2.04
SERF2-210ENST00000409960 CHIC1Q5VXU3 224 aa27.16■■□□□ 1.94
SERF2-210ENST00000409960 CCDC180Q9P1Z9 1646 aa26.66■■□□□ 1.86
SERF2-210ENST00000409960 ABCC9O60706 1549 aa26.63■■□□□ 1.85
SERF2-210ENST00000409960 RB1CC1Q8TDY2 1594 aa25.41■■□□□ 1.66
SERF2-210ENST00000409960 NACADO15069 1562 aa25.22■■□□□ 1.63
SERF2-210ENST00000409960 DNAJC5BQ9UF47 199 aa24.99■■□□□ 1.59
SERF2-210ENST00000409960 DCAF8L2P0C7V8 631 aa24.95■■□□□ 1.58
SERF2-210ENST00000409960 MYO15BQ96JP2 1530 aa24.88■■□□□ 1.57
SERF2-210ENST00000409960 UNC13AQ9UPW8 1703 aa24.77■■□□□ 1.56
SERF2-210ENST00000409960 PABPN1Q86U42 306 aaKnown RBP eCLIP24.74■■□□□ 1.55
SERF2-210ENST00000409960 BICRAQ9NZM4 1560 aa24.59■■□□□ 1.53
SERF2-210ENST00000409960 ZCCHC6Q5VYS8 1495 aaKnown RBP24.51■■□□□ 1.51
SERF2-210ENST00000409960 DCAF1Q9Y4B6 1507 aa24.51■■□□□ 1.51
SERF2-210ENST00000409960 SHROOM4Q9ULL8 1493 aa24.4■■□□□ 1.5
SERF2-210ENST00000409960 SCRIBQ14160 1630 aa24.19■■□□□ 1.46
SERF2-210ENST00000409960 CC2D2AQ9P2K1 1620 aa24.09■■□□□ 1.45
SERF2-210ENST00000409960 CECR2Q9BXF3 1484 aa24.04■■□□□ 1.44
SERF2-210ENST00000409960 EIF4G1Q04637 1599 aaKnown RBP24.03■■□□□ 1.44
SERF2-210ENST00000409960 PHF23Q9BUL5 403 aaPredicted RBP23.91■■□□□ 1.42
SERF2-210ENST00000409960 SENP3Q9H4L4 574 aaPredicted RBP23.53■■□□□ 1.36
SERF2-210ENST00000409960 NCAPD3P42695 1498 aa23.25■■□□□ 1.31
SERF2-210ENST00000409960 ATAD2BQ9ULI0 1458 aa23.14■■□□□ 1.29
SERF2-210ENST00000409960 SMARCA2P51531 1590 aa23.14■■□□□ 1.29
SERF2-210ENST00000409960 DNAJC5Q9H3Z4 198 aa23.12■■□□□ 1.29
SERF2-210ENST00000409960 SMARCA4P51532 1647 aa23.11■■□□□ 1.29
SERF2-210ENST00000409960 HMGXB3Q12766 1538 aa23.1■■□□□ 1.29
SERF2-210ENST00000409960 CUX2O14529 1486 aa23.09■■□□□ 1.29
SERF2-210ENST00000409960 ERCC6Q03468 1493 aa23.07■■□□□ 1.28
SERF2-210ENST00000409960 BAZ1AQ9NRL2 1556 aaPredicted RBP23.01■■□□□ 1.27
SERF2-210ENST00000409960 BAZ1BQ9UIG0 1483 aaKnown RBP22.94■■□□□ 1.26
SERF2-210ENST00000409960 PEG3Q9GZU2 1588 aa22.92■■□□□ 1.26
SERF2-210ENST00000409960 NESP48681 1621 aa22.83■■□□□ 1.25
SERF2-210ENST00000409960 LAMC3Q9Y6N6 1575 aa22.77■■□□□ 1.24
SERF2-210ENST00000409960 MROH2BQ7Z745 1585 aa22.76■■□□□ 1.23
SERF2-210ENST00000409960 THOC2Q8NI27 1593 aaKnown RBP22.67■■□□□ 1.22
SERF2-210ENST00000409960 PDS5BQ9NTI5 1447 aa22.65■■□□□ 1.22
SERF2-210ENST00000409960 KIF21AQ7Z4S6 1674 aa22.58■■□□□ 1.2
SERF2-210ENST00000409960 CADPSQ9ULU8 1353 aa22.53■■□□□ 1.2
SERF2-210ENST00000409960 WIZO95785 1651 aa22.48■■□□□ 1.19
SERF2-210ENST00000409960 MRC2Q9UBG0 1479 aa22.42■■□□□ 1.18
SERF2-210ENST00000409960 WDR62O43379 1518 aa22.37■■□□□ 1.17
SERF2-210ENST00000409960 CEP164Q9UPV0 1460 aa22.32■■□□□ 1.16
SERF2-210ENST00000409960 FANCD2Q9BXW9 1451 aa22.27■■□□□ 1.16
SERF2-210ENST00000409960 RSF1Q96T23 1441 aaPredicted RBP22.26■■□□□ 1.15
SERF2-210ENST00000409960 CFTRP13569 1480 aa22.26■■□□□ 1.15
SERF2-210ENST00000409960 TOP2AP11388 1531 aaKnown RBP22.24■■□□□ 1.15
SERF2-210ENST00000409960 PRDM2Q13029 1718 aa22.07■■□□□ 1.12
SERF2-210ENST00000409960 URB2Q14146 1524 aaKnown RBP22.06■■□□□ 1.12
SERF2-210ENST00000409960 PLPPR3Q6T4P5 718 aa22.04■■□□□ 1.12
SERF2-210ENST00000409960 TRIM41Q8WV44 630 aa22.01■■□□□ 1.11
SERF2-210ENST00000409960 OSCARQ8IYS5 282 aa21.99■■□□□ 1.11
SERF2-210ENST00000409960 CCDC88BA6NC98 1476 aa21.95■■□□□ 1.1
SERF2-210ENST00000409960 IFT140Q96RY7 1462 aa21.89■■□□□ 1.09
SERF2-210ENST00000409960 ABCC8Q09428 1581 aa21.87■■□□□ 1.09
SERF2-210ENST00000409960 FOXD1Q16676 465 aa21.85■■□□□ 1.09
SERF2-210ENST00000409960 TOPBP1Q92547 1522 aa21.83■■□□□ 1.09
SERF2-210ENST00000409960 ZNF608Q9ULD9 1512 aaPredicted RBP21.78■■□□□ 1.08
SERF2-210ENST00000409960 DNMBPQ6XZF7 1577 aa21.77■■□□□ 1.08
SERF2-210ENST00000409960 EIF4G3O43432 1585 aaKnown RBP21.71■■□□□ 1.07
SERF2-210ENST00000409960 RIMBP3CA6NJZ7 1639 aa21.68■■□□□ 1.06
SERF2-210ENST00000409960 RIMBP3BA6NNM3 1639 aa21.68■■□□□ 1.06
SERF2-210ENST00000409960 RIMBP3Q9UFD9 1639 aa21.68■■□□□ 1.06
SERF2-210ENST00000409960 TARBP1Q13395 1621 aaKnown RBP21.64■■□□□ 1.05
SERF2-210ENST00000409960 ARHGEF11O15085 1522 aa21.62■■□□□ 1.05
SERF2-210ENST00000409960 POLA1P09884 1462 aaPredicted RBP21.6■■□□□ 1.05
SERF2-210ENST00000409960 AQRO60306 1485 aaKnown RBP eCLIP21.58■■□□□ 1.044e-9■■■■■ 47.1
SERF2-210ENST00000409960 CHD1O14646 1710 aa21.56■■□□□ 1.04
SERF2-210ENST00000409960 WDR97A6NE52 1622 aa21.52■■□□□ 1.04
SERF2-210ENST00000409960 SOGA1O94964 1423 aa21.5■■□□□ 1.03
SERF2-210ENST00000409960 RAD54L2Q9Y4B4 1467 aa21.47■■□□□ 1.03
SERF2-210ENST00000409960 FBLN2P98095 1184 aa21.47■■□□□ 1.03
SERF2-210ENST00000409960 FGD5Q6ZNL6 1462 aa21.45■■□□□ 1.02
SERF2-210ENST00000409960 CYB5RLQ6IPT4 315 aa21.43■■□□□ 1.02
SERF2-210ENST00000409960 TDRD9Q8NDG6 1382 aaKnown RBP21.43■■□□□ 1.02
SERF2-210ENST00000409960 CUX1P39880 1505 aa21.39■■□□□ 1.02
SERF2-210ENST00000409960 SNAPC4Q5SXM2 1469 aa21.39■■□□□ 1.01
SERF2-210ENST00000409960 MAGI1Q96QZ7 1491 aaPredicted RBP21.39■■□□□ 1.01
SERF2-210ENST00000409960 ARAP1Q96P48 1450 aa21.37■■□□□ 1.01
SERF2-210ENST00000409960 GRIN2BQ13224 1484 aa21.35■■□□□ 1.01
SERF2-210ENST00000409960 SYNJ1O43426 1573 aa21.35■■□□□ 1.01
SERF2-210ENST00000409960 CHMP7Q8WUX9 453 aaPredicted RBP21.34■■□□□ 1.01
SERF2-210ENST00000409960 CLASP1Q7Z460 1538 aa21.32■■□□□ 1
SERF2-210ENST00000409960 SYNJ2O15056 1496 aa21.3■■□□□ 1
SERF2-210ENST00000409960 GAPVD1Q14C86 1478 aa21.26■□□□□ 0.99
SERF2-210ENST00000409960 PBRM1Q86U86 1689 aa21.25■□□□□ 0.99
SERF2-210ENST00000409960 TRHP20396 242 aaPredicted RBP21.24■□□□□ 0.99
SERF2-210ENST00000409960 ABCA10Q8WWZ4 1543 aa21.23■□□□□ 0.99
SERF2-210ENST00000409960 ABCA5Q8WWZ7 1642 aa21.19■□□□□ 0.98
SERF2-210ENST00000409960 SUPT5HO00267 1087 aaKnown RBP21.17■□□□□ 0.98
SERF2-210ENST00000409960 WRNQ14191 1432 aaPredicted RBP eCLIP21.14■□□□□ 0.98
SERF2-210ENST00000409960 TOP2BQ02880 1626 aa21.07■□□□□ 0.96
SERF2-210ENST00000409960 BIVM-ERCC5R4GMW8 1640 aa21.07■□□□□ 0.96
SERF2-210ENST00000409960 PPP6R1Q9UPN7 881 aa21.07■□□□□ 0.96
SERF2-210ENST00000409960 GRIN2AQ12879 1464 aa21.07■□□□□ 0.96
SERF2-210ENST00000409960 ADAMTS12P58397 1594 aa21.04■□□□□ 0.96
SERF2-210ENST00000409960 ADRA2BP18089 450 aa21.03■□□□□ 0.96
SERF2-210ENST00000409960 FHAD1B1AJZ9 1412 aa21■□□□□ 0.95
SERF2-210ENST00000409960 NUP160Q12769 1436 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms