RNA–Protein interactions for RNA: ENST00000409646.5

SERF2-209, Transcript of small EDRK-rich factor 2, humanhuman

TSL 4 BASIC

Gene SERF2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF2-209ENST00000409646 NISCHQ9Y2I1 1504 aa35.22■■■■□ 3.23
SERF2-209ENST00000409646 CCDC180Q9P1Z9 1646 aa31.12■■■□□ 2.57
SERF2-209ENST00000409646 ABCC9O60706 1549 aa29.51■■■□□ 2.32
SERF2-209ENST00000409646 ZCCHC6Q5VYS8 1495 aaKnown RBP29.48■■■□□ 2.31
SERF2-209ENST00000409646 DCAF1Q9Y4B6 1507 aa29.3■■■□□ 2.28
SERF2-209ENST00000409646 MYO15BQ96JP2 1530 aa29.21■■■□□ 2.27
SERF2-209ENST00000409646 NACADO15069 1562 aa29.06■■■□□ 2.24
SERF2-209ENST00000409646 RB1CC1Q8TDY2 1594 aa28.88■■■□□ 2.21
SERF2-209ENST00000409646 DCAF8L2P0C7V8 631 aa28.88■■■□□ 2.21
SERF2-209ENST00000409646 UNC13AQ9UPW8 1703 aa28.25■■■□□ 2.11
SERF2-209ENST00000409646 SCRIBQ14160 1630 aa28.23■■■□□ 2.11
SERF2-209ENST00000409646 SHROOM4Q9ULL8 1493 aa27.95■■■□□ 2.07
SERF2-209ENST00000409646 BICRAQ9NZM4 1560 aa27.94■■■□□ 2.06
SERF2-209ENST00000409646 PABPN1Q86U42 306 aaKnown RBP eCLIP27.63■■■□□ 2.01
SERF2-209ENST00000409646 BAZ1AQ9NRL2 1556 aaPredicted RBP27.27■■□□□ 1.96
SERF2-209ENST00000409646 CECR2Q9BXF3 1484 aa27.24■■□□□ 1.95
SERF2-209ENST00000409646 DNAJC5BQ9UF47 199 aa27.23■■□□□ 1.95
SERF2-209ENST00000409646 SMARCA4P51532 1647 aa27.18■■□□□ 1.94
SERF2-209ENST00000409646 EIF4G1Q04637 1599 aaKnown RBP27.14■■□□□ 1.94
SERF2-209ENST00000409646 MROH2BQ7Z745 1585 aa27.08■■□□□ 1.93
SERF2-209ENST00000409646 RSF1Q96T23 1441 aaPredicted RBP27.04■■□□□ 1.92
SERF2-209ENST00000409646 PEG3Q9GZU2 1588 aa27■■□□□ 1.91
SERF2-209ENST00000409646 SMARCA2P51531 1590 aa26.9■■□□□ 1.9
SERF2-209ENST00000409646 CC2D2AQ9P2K1 1620 aa26.84■■□□□ 1.89
SERF2-209ENST00000409646 WIZO95785 1651 aa26.83■■□□□ 1.89
SERF2-209ENST00000409646 ATAD2BQ9ULI0 1458 aa26.83■■□□□ 1.89
SERF2-209ENST00000409646 NCAPD3P42695 1498 aa26.77■■□□□ 1.88
SERF2-209ENST00000409646 HMGXB3Q12766 1538 aa26.73■■□□□ 1.87
SERF2-209ENST00000409646 SUPT5HO00267 1087 aaKnown RBP26.69■■□□□ 1.86
SERF2-209ENST00000409646 TOP2AP11388 1531 aaKnown RBP26.65■■□□□ 1.86
SERF2-209ENST00000409646 BAZ1BQ9UIG0 1483 aaKnown RBP26.63■■□□□ 1.85
SERF2-209ENST00000409646 CCDC88BA6NC98 1476 aa26.28■■□□□ 1.8
SERF2-209ENST00000409646 CFTRP13569 1480 aa26■■□□□ 1.75
SERF2-209ENST00000409646 CADPSQ9ULU8 1353 aa25.98■■□□□ 1.75
SERF2-209ENST00000409646 PRDM2Q13029 1718 aa25.98■■□□□ 1.75
SERF2-209ENST00000409646 LAMC3Q9Y6N6 1575 aa25.98■■□□□ 1.75
SERF2-209ENST00000409646 NESP48681 1621 aa25.74■■□□□ 1.71
SERF2-209ENST00000409646 PDS5BQ9NTI5 1447 aa25.73■■□□□ 1.71
SERF2-209ENST00000409646 FANCD2Q9BXW9 1451 aa25.65■■□□□ 1.7
SERF2-209ENST00000409646 KIF21AQ7Z4S6 1674 aa25.58■■□□□ 1.68
SERF2-209ENST00000409646 CEP164Q9UPV0 1460 aa25.57■■□□□ 1.68
SERF2-209ENST00000409646 ABCC8Q09428 1581 aa25.5■■□□□ 1.67
SERF2-209ENST00000409646 WRNQ14191 1432 aaPredicted RBP eCLIP25.47■■□□□ 1.67
SERF2-209ENST00000409646 BIVM-ERCC5R4GMW8 1640 aa25.44■■□□□ 1.66
SERF2-209ENST00000409646 ERCC6Q03468 1493 aa25.43■■□□□ 1.66
SERF2-209ENST00000409646 CHIC1Q5VXU3 224 aa25.43■■□□□ 1.66
SERF2-209ENST00000409646 TOP2BQ02880 1626 aa25.41■■□□□ 1.66
SERF2-209ENST00000409646 DNMBPQ6XZF7 1577 aa25.4■■□□□ 1.66
SERF2-209ENST00000409646 MRC2Q9UBG0 1479 aa25.4■■□□□ 1.66
SERF2-209ENST00000409646 CUX1P39880 1505 aa25.37■■□□□ 1.65
SERF2-209ENST00000409646 SYNJ1O43426 1573 aa25.35■■□□□ 1.65
SERF2-209ENST00000409646 THOC2Q8NI27 1593 aaKnown RBP25.34■■□□□ 1.65
SERF2-209ENST00000409646 URB2Q14146 1524 aaKnown RBP25.33■■□□□ 1.65
SERF2-209ENST00000409646 TOPBP1Q92547 1522 aa25.33■■□□□ 1.65
SERF2-209ENST00000409646 WDR62O43379 1518 aa25.32■■□□□ 1.64
SERF2-209ENST00000409646 TRIM41Q8WV44 630 aa25.28■■□□□ 1.64
SERF2-209ENST00000409646 CUX2O14529 1486 aa25.26■■□□□ 1.63
SERF2-209ENST00000409646 FGD5Q6ZNL6 1462 aa25.17■■□□□ 1.62
SERF2-209ENST00000409646 POLA1P09884 1462 aaPredicted RBP25.15■■□□□ 1.62
SERF2-209ENST00000409646 SOGA1O94964 1423 aa25.05■■□□□ 1.6
SERF2-209ENST00000409646 ABCA10Q8WWZ4 1543 aa25.04■■□□□ 1.6
SERF2-209ENST00000409646 WDR97A6NE52 1622 aa25.04■■□□□ 1.6
SERF2-209ENST00000409646 TARBP1Q13395 1621 aaKnown RBP25.04■■□□□ 1.6
SERF2-209ENST00000409646 IFT140Q96RY7 1462 aa25.03■■□□□ 1.6
SERF2-209ENST00000409646 EEA1Q15075 1411 aa25■■□□□ 1.59
SERF2-209ENST00000409646 RAD54L2Q9Y4B4 1467 aa24.96■■□□□ 1.59
SERF2-209ENST00000409646 KIF27Q86VH2 1401 aa24.92■■□□□ 1.58
SERF2-209ENST00000409646 ABCA5Q8WWZ7 1642 aa24.88■■□□□ 1.57
SERF2-209ENST00000409646 DNAJC5Q9H3Z4 198 aa24.84■■□□□ 1.57
SERF2-209ENST00000409646 GAPVD1Q14C86 1478 aa24.79■■□□□ 1.56
SERF2-209ENST00000409646 ERICH3Q5RHP9 1530 aa24.78■■□□□ 1.56
SERF2-209ENST00000409646 RUSC2Q8N2Y8 1516 aa24.78■■□□□ 1.56
SERF2-209ENST00000409646 EIF4G3O43432 1585 aaKnown RBP24.76■■□□□ 1.55
SERF2-209ENST00000409646 ZNF608Q9ULD9 1512 aaPredicted RBP24.75■■□□□ 1.55
SERF2-209ENST00000409646 PBRM1Q86U86 1689 aa24.75■■□□□ 1.55
SERF2-209ENST00000409646 TDRD9Q8NDG6 1382 aaKnown RBP24.74■■□□□ 1.55
SERF2-209ENST00000409646 CSRNP3Q8WYN3 585 aa24.73■■□□□ 1.55
SERF2-209ENST00000409646 GRIN2BQ13224 1484 aa24.71■■□□□ 1.55
SERF2-209ENST00000409646 IGF1RP08069 1367 aa24.71■■□□□ 1.55
SERF2-209ENST00000409646 CUL7Q14999 1698 aa24.71■■□□□ 1.55
SERF2-209ENST00000409646 AQRO60306 1485 aaKnown RBP eCLIP24.7■■□□□ 1.544e-9■■■■■ 47.1
SERF2-209ENST00000409646 KIF21BO75037 1637 aa24.64■■□□□ 1.54
SERF2-209ENST00000409646 PRXQ9BXM0 1461 aa24.64■■□□□ 1.53
SERF2-209ENST00000409646 MAGI1Q96QZ7 1491 aaPredicted RBP24.62■■□□□ 1.53
SERF2-209ENST00000409646 FAM9AQ8IZU1 332 aaPredicted RBP24.59■■□□□ 1.53
SERF2-209ENST00000409646 CARMIL1Q5VZK9 1371 aa24.57■■□□□ 1.52
SERF2-209ENST00000409646 ADAMTS12P58397 1594 aa24.56■■□□□ 1.52
SERF2-209ENST00000409646 FHAD1B1AJZ9 1412 aa24.56■■□□□ 1.52
SERF2-209ENST00000409646 RAPGEF2Q9Y4G8 1499 aa24.54■■□□□ 1.52
SERF2-209ENST00000409646 SNAPC4Q5SXM2 1469 aa24.52■■□□□ 1.52
SERF2-209ENST00000409646 GOLGA3Q08378 1498 aa24.5■■□□□ 1.51
SERF2-209ENST00000409646 SYNJ2O15056 1496 aa24.48■■□□□ 1.51
SERF2-209ENST00000409646 GRIN2AQ12879 1464 aa24.38■■□□□ 1.49
SERF2-209ENST00000409646 TNIKQ9UKE5 1360 aa24.34■■□□□ 1.49
SERF2-209ENST00000409646 CHD1O14646 1710 aa24.33■■□□□ 1.49
SERF2-209ENST00000409646 CHMP7Q8WUX9 453 aaPredicted RBP24.33■■□□□ 1.49
SERF2-209ENST00000409646 CTTNBP2Q8WZ74 1663 aa24.33■■□□□ 1.49
SERF2-209ENST00000409646 NUP160Q12769 1436 aa24.28■■□□□ 1.48
SERF2-209ENST00000409646 LOC105371045A0A1W2PR82 267 aa24.27■■□□□ 1.48
SERF2-209ENST00000409646 UBTFP17480 764 aaKnown RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms