RNA–Protein interactions for RNA: ENST00000476439.1

GRTP1-204, Transcript of growth hormone regulated TBC protein 1, humanhuman

TSL 2

Gene GRTP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRTP1-204ENST00000476439 NISCHQ9Y2I1 1504 aa46.85■■■■■ 5.09
GRTP1-204ENST00000476439 CCDC180Q9P1Z9 1646 aa41.72■■■■■ 4.27
GRTP1-204ENST00000476439 ABCC9O60706 1549 aa40.55■■■■■ 4.08
GRTP1-204ENST00000476439 NACADO15069 1562 aa39.15■■■■□ 3.86
GRTP1-204ENST00000476439 RB1CC1Q8TDY2 1594 aa39.14■■■■□ 3.86
GRTP1-204ENST00000476439 ZCCHC6Q5VYS8 1495 aaKnown RBP39.1■■■■□ 3.85
GRTP1-204ENST00000476439 MYO15BQ96JP2 1530 aa39.02■■■■□ 3.84
GRTP1-204ENST00000476439 DCAF1Q9Y4B6 1507 aa38.86■■■■□ 3.81
GRTP1-204ENST00000476439 DCAF8L2P0C7V8 631 aa38.77■■■■□ 3.8
GRTP1-204ENST00000476439 UNC13AQ9UPW8 1703 aa38.29■■■■□ 3.72
GRTP1-204ENST00000476439 BICRAQ9NZM4 1560 aa38■■■■□ 3.67
GRTP1-204ENST00000476439 SCRIBQ14160 1630 aa37.94■■■■□ 3.66
GRTP1-204ENST00000476439 PABPN1Q86U42 306 aaKnown RBP eCLIP37.8■■■■□ 3.64
GRTP1-204ENST00000476439 SHROOM4Q9ULL8 1493 aa37.69■■■■□ 3.62
GRTP1-204ENST00000476439 DNAJC5BQ9UF47 199 aa37.11■■■■□ 3.53
GRTP1-204ENST00000476439 EIF4G1Q04637 1599 aaKnown RBP36.95■■■■□ 3.51
GRTP1-204ENST00000476439 CC2D2AQ9P2K1 1620 aa36.76■■■■□ 3.48
GRTP1-204ENST00000476439 CECR2Q9BXF3 1484 aa36.46■■■■□ 3.43
GRTP1-204ENST00000476439 SMARCA4P51532 1647 aa36.36■■■■□ 3.41
GRTP1-204ENST00000476439 BAZ1AQ9NRL2 1556 aaPredicted RBP36.32■■■■□ 3.4
GRTP1-204ENST00000476439 ATAD2BQ9ULI0 1458 aa36.11■■■■□ 3.37
GRTP1-204ENST00000476439 NCAPD3P42695 1498 aa36.1■■■■□ 3.37
GRTP1-204ENST00000476439 SMARCA2P51531 1590 aa36.09■■■■□ 3.37
GRTP1-204ENST00000476439 MROH2BQ7Z745 1585 aa36.08■■■■□ 3.37
GRTP1-204ENST00000476439 PEG3Q9GZU2 1588 aa36.08■■■■□ 3.37
GRTP1-204ENST00000476439 HMGXB3Q12766 1538 aa35.98■■■■□ 3.35
GRTP1-204ENST00000476439 BAZ1BQ9UIG0 1483 aaKnown RBP35.79■■■■□ 3.32
GRTP1-204ENST00000476439 WIZO95785 1651 aa35.68■■■■□ 3.3
GRTP1-204ENST00000476439 RSF1Q96T23 1441 aaPredicted RBP35.68■■■■□ 3.3
GRTP1-204ENST00000476439 TOP2AP11388 1531 aaKnown RBP35.37■■■■□ 3.25
GRTP1-204ENST00000476439 LAMC3Q9Y6N6 1575 aa35.15■■■■□ 3.22
GRTP1-204ENST00000476439 NESP48681 1621 aa35.14■■■■□ 3.22
GRTP1-204ENST00000476439 CADPSQ9ULU8 1353 aa34.99■■■■□ 3.19
GRTP1-204ENST00000476439 ERCC6Q03468 1493 aa34.93■■■■□ 3.18
GRTP1-204ENST00000476439 CCDC88BA6NC98 1476 aa34.88■■■■□ 3.17
GRTP1-204ENST00000476439 CFTRP13569 1480 aa34.86■■■■□ 3.17
GRTP1-204ENST00000476439 PDS5BQ9NTI5 1447 aa34.83■■■■□ 3.17
GRTP1-204ENST00000476439 KIF21AQ7Z4S6 1674 aa34.79■■■■□ 3.16
GRTP1-204ENST00000476439 THOC2Q8NI27 1593 aaKnown RBP34.72■■■■□ 3.15
GRTP1-204ENST00000476439 PRDM2Q13029 1718 aa34.67■■■■□ 3.14
GRTP1-204ENST00000476439 CUX2O14529 1486 aa34.65■■■■□ 3.14
GRTP1-204ENST00000476439 FANCD2Q9BXW9 1451 aa34.6■■■■□ 3.13
GRTP1-204ENST00000476439 SUPT5HO00267 1087 aaKnown RBP34.6■■■■□ 3.13
GRTP1-204ENST00000476439 CEP164Q9UPV0 1460 aa34.56■■■■□ 3.12
GRTP1-204ENST00000476439 MRC2Q9UBG0 1479 aa34.52■■■■□ 3.12
GRTP1-204ENST00000476439 WDR62O43379 1518 aa34.45■■■■□ 3.11
GRTP1-204ENST00000476439 URB2Q14146 1524 aaKnown RBP34.28■■■■□ 3.08
GRTP1-204ENST00000476439 ABCC8Q09428 1581 aa34.09■■■■□ 3.05
GRTP1-204ENST00000476439 TOPBP1Q92547 1522 aa34.09■■■■□ 3.05
GRTP1-204ENST00000476439 DNMBPQ6XZF7 1577 aa34.08■■■■□ 3.05
GRTP1-204ENST00000476439 CUX1P39880 1505 aa33.86■■■■□ 3.01
GRTP1-204ENST00000476439 IFT140Q96RY7 1462 aa33.85■■■■□ 3.01
GRTP1-204ENST00000476439 POLA1P09884 1462 aaPredicted RBP33.8■■■■□ 3
GRTP1-204ENST00000476439 TARBP1Q13395 1621 aaKnown RBP33.75■■■□□ 2.99
GRTP1-204ENST00000476439 FGD5Q6ZNL6 1462 aa33.71■■■□□ 2.99
GRTP1-204ENST00000476439 ZNF608Q9ULD9 1512 aaPredicted RBP33.66■■■□□ 2.98
GRTP1-204ENST00000476439 BIVM-ERCC5R4GMW8 1640 aa33.64■■■□□ 2.98
GRTP1-204ENST00000476439 WRNQ14191 1432 aaPredicted RBP eCLIP33.62■■■□□ 2.97
GRTP1-204ENST00000476439 TOP2BQ02880 1626 aa33.61■■■□□ 2.97
GRTP1-204ENST00000476439 EIF4G3O43432 1585 aaKnown RBP33.6■■■□□ 2.97
GRTP1-204ENST00000476439 SYNJ1O43426 1573 aa33.59■■■□□ 2.97
GRTP1-204ENST00000476439 RAD54L2Q9Y4B4 1467 aa33.58■■■□□ 2.97
GRTP1-204ENST00000476439 SOGA1O94964 1423 aa33.58■■■□□ 2.97
GRTP1-204ENST00000476439 WDR97A6NE52 1622 aa33.55■■■□□ 2.96
GRTP1-204ENST00000476439 ABCA10Q8WWZ4 1543 aa33.43■■■□□ 2.94
GRTP1-204ENST00000476439 AQRO60306 1485 aaKnown RBP eCLIP33.43■■■□□ 2.941e-8■■■■□ 20.5
GRTP1-204ENST00000476439 DNAJC5Q9H3Z4 198 aa33.38■■■□□ 2.93
GRTP1-204ENST00000476439 TDRD9Q8NDG6 1382 aaKnown RBP33.35■■■□□ 2.93
GRTP1-204ENST00000476439 ABCA5Q8WWZ7 1642 aa33.34■■■□□ 2.93
GRTP1-204ENST00000476439 GRIN2BQ13224 1484 aa33.25■■■□□ 2.91
GRTP1-204ENST00000476439 GAPVD1Q14C86 1478 aa33.24■■■□□ 2.91
GRTP1-204ENST00000476439 PBRM1Q86U86 1689 aa33.23■■■□□ 2.91
GRTP1-204ENST00000476439 SNAPC4Q5SXM2 1469 aa33.18■■■□□ 2.9
GRTP1-204ENST00000476439 MAGI1Q96QZ7 1491 aaPredicted RBP33.18■■■□□ 2.9
GRTP1-204ENST00000476439 CHD1O14646 1710 aa33.14■■■□□ 2.89
GRTP1-204ENST00000476439 OSCARQ8IYS5 282 aa33.06■■■□□ 2.88
GRTP1-204ENST00000476439 ERICH3Q5RHP9 1530 aa33.04■■■□□ 2.88
GRTP1-204ENST00000476439 SYNJ2O15056 1496 aa33.04■■■□□ 2.88
GRTP1-204ENST00000476439 ADAMTS12P58397 1594 aa33■■■□□ 2.87
GRTP1-204ENST00000476439 KIF27Q86VH2 1401 aa32.91■■■□□ 2.86
GRTP1-204ENST00000476439 FHAD1B1AJZ9 1412 aa32.87■■■□□ 2.85
GRTP1-204ENST00000476439 FBLN2P98095 1184 aa32.86■■■□□ 2.85
GRTP1-204ENST00000476439 CHMP7Q8WUX9 453 aaPredicted RBP32.85■■■□□ 2.85
GRTP1-204ENST00000476439 GRIN2AQ12879 1464 aa32.84■■■□□ 2.85
GRTP1-204ENST00000476439 CLASP1Q7Z460 1538 aa32.83■■■□□ 2.85
GRTP1-204ENST00000476439 CUL7Q14999 1698 aa32.76■■■□□ 2.84
GRTP1-204ENST00000476439 IGF1RP08069 1367 aa32.75■■■□□ 2.83
GRTP1-204ENST00000476439 TRIM41Q8WV44 630 aa32.73■■■□□ 2.83
GRTP1-204ENST00000476439 NUP160Q12769 1436 aa32.72■■■□□ 2.83
GRTP1-204ENST00000476439 CEP170Q5SW79 1584 aa32.69■■■□□ 2.82
GRTP1-204ENST00000476439 ARHGEF11O15085 1522 aa32.67■■■□□ 2.82
GRTP1-204ENST00000476439 RIMBP3CA6NJZ7 1639 aa32.66■■■□□ 2.82
GRTP1-204ENST00000476439 RIMBP3BA6NNM3 1639 aa32.66■■■□□ 2.82
GRTP1-204ENST00000476439 RIMBP3Q9UFD9 1639 aa32.66■■■□□ 2.82
GRTP1-204ENST00000476439 RUSC2Q8N2Y8 1516 aa32.61■■■□□ 2.81
GRTP1-204ENST00000476439 CARMIL1Q5VZK9 1371 aa32.54■■■□□ 2.8
GRTP1-204ENST00000476439 SHROOM2Q13796 1616 aa32.51■■■□□ 2.79
GRTP1-204ENST00000476439 CHIC1Q5VXU3 224 aa32.42■■■□□ 2.78
GRTP1-204ENST00000476439 ARAP1Q96P48 1450 aa32.42■■■□□ 2.78
GRTP1-204ENST00000476439 RAPGEF2Q9Y4G8 1499 aa32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms