RNA–Protein interactions for RNA: ENST00000418910.1

PPP1CB-204, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

TSL 2

Gene PPP1CB, Length 281 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-204ENST00000418910 AEBP2Q6ZN18 517 aaPredicted RBP23.25■■□□□ 1.31
PPP1CB-204ENST00000418910 CHIC1Q5VXU3 224 aa22.24■■□□□ 1.15
PPP1CB-204ENST00000418910 SENP3Q9H4L4 574 aaPredicted RBP19.74■□□□□ 0.75
PPP1CB-204ENST00000418910 PHF23Q9BUL5 403 aaPredicted RBP19.55■□□□□ 0.72
PPP1CB-204ENST00000418910 FOXD1Q16676 465 aa18.41■□□□□ 0.54
PPP1CB-204ENST00000418910 POTEDQ86YR6 584 aa17.94■□□□□ 0.46
PPP1CB-204ENST00000418910 PLPPR3Q6T4P5 718 aa17.86■□□□□ 0.45
PPP1CB-204ENST00000418910 PPP6R1Q9UPN7 881 aa17.4■□□□□ 0.38
PPP1CB-204ENST00000418910 ADRA2BP18089 450 aa17.36■□□□□ 0.37
PPP1CB-204ENST00000418910 PIAS4Q8N2W9 510 aaPredicted RBP17.26■□□□□ 0.35
PPP1CB-204ENST00000418910 MSH5O43196 834 aa17.09■□□□□ 0.33
PPP1CB-204ENST00000418910 MAPK8IP2Q13387 824 aaPredicted RBP15.9■□□□□ 0.14
PPP1CB-204ENST00000418910 SCAF1Q9H7N4 1312 aaKnown RBP15.8■□□□□ 0.12
PPP1CB-204ENST00000418910 PPP4R3CPQ6ZMV5 832 aa15.71■□□□□ 0.11
PPP1CB-204ENST00000418910 DMRT2Q9Y5R5 561 aa15.69■□□□□ 0.1
PPP1CB-204ENST00000418910 CNKSR2Q8WXI2 1034 aa15.34■□□□□ 0.05
PPP1CB-204ENST00000418910 HOXD11P31277 338 aaPredicted RBP15.19■□□□□ 0.02
PPP1CB-204ENST00000418910 CACNB1Q02641 598 aaPredicted RBP15.14■□□□□ 0.01
PPP1CB-204ENST00000418910 NCBP3Q53F19 620 aaKnown RBP15.13■□□□□ 0.01
PPP1CB-204ENST00000418910 RNF216Q9NWF9 866 aaPredicted RBP15.13■□□□□ 0.01
PPP1CB-204ENST00000418910 DCAF8L1A6NGE4 600 aa15.09■□□□□ 0.01
PPP1CB-204ENST00000418910 NPM3O75607 178 aaKnown RBP14.96□□□□□ -0.01
PPP1CB-204ENST00000418910 KCNA4P22459 653 aa14.88□□□□□ -0.03
PPP1CB-204ENST00000418910 RNF39Q9H2S5 420 aa14.63□□□□□ -0.07
PPP1CB-204ENST00000418910 DNAJC5BQ9UF47 199 aa14.57□□□□□ -0.08
PPP1CB-204ENST00000418910 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.51□□□□□ -0.09
PPP1CB-204ENST00000418910 C1QBPQ07021 282 aaKnown RBP14.4□□□□□ -0.1
PPP1CB-204ENST00000418910 SLC4A2P04920 1241 aa14.23□□□□□ -0.13
PPP1CB-204ENST00000418910 U3KPZ7 1027 aaPredicted RBP14.23□□□□□ -0.13
PPP1CB-204ENST00000418910 SLC4A1APQ9BWU0 796 aaKnown RBP14.08□□□□□ -0.16
PPP1CB-204ENST00000418910 SPINK5Q9NQ38 1064 aaPredicted RBP13.99□□□□□ -0.17
PPP1CB-204ENST00000418910 POTEHQ6S545 545 aa13.94□□□□□ -0.18
PPP1CB-204ENST00000418910 CAPN15O75808 1086 aa13.93□□□□□ -0.18
PPP1CB-204ENST00000418910 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.84□□□□□ -0.19
PPP1CB-204ENST00000418910 HNRNPUL2Q1KMD3 747 aaKnown RBP13.84□□□□□ -0.19
PPP1CB-204ENST00000418910 MYCNP04198 464 aaPredicted RBP13.8□□□□□ -0.2
PPP1CB-204ENST00000418910 DSG3P32926 999 aa13.79□□□□□ -0.2
PPP1CB-204ENST00000418910 APLP2Q06481 763 aa13.79□□□□□ -0.2
PPP1CB-204ENST00000418910 SAMD1Q6SPF0 538 aaPredicted RBP13.79□□□□□ -0.2
PPP1CB-204ENST00000418910 FOXD4L1Q9NU39 408 aa13.79□□□□□ -0.2
PPP1CB-204ENST00000418910 TRHP20396 242 aaPredicted RBP13.78□□□□□ -0.2
PPP1CB-204ENST00000418910 ZNF219Q9P2Y4 722 aaPredicted RBP13.71□□□□□ -0.21
PPP1CB-204ENST00000418910 ZBTB22O15209 634 aa13.7□□□□□ -0.22
PPP1CB-204ENST00000418910 ABCB7O75027 752 aa13.66□□□□□ -0.22
PPP1CB-204ENST00000418910 ATF5Q9Y2D1 282 aaPredicted RBP13.53□□□□□ -0.24
PPP1CB-204ENST00000418910 POLA2Q14181 598 aa13.43□□□□□ -0.26
PPP1CB-204ENST00000418910 ATXN8OSP0DMR3 200 aa13.3□□□□□ -0.28
PPP1CB-204ENST00000418910 CSRNP3Q8WYN3 585 aa13.25□□□□□ -0.29
PPP1CB-204ENST00000418910 EHMT2Q96KQ7 1210 aa13.23□□□□□ -0.29
PPP1CB-204ENST00000418910 ZBTB12Q9Y330 459 aaPredicted RBP13.12□□□□□ -0.31
PPP1CB-204ENST00000418910 RBM42Q9BTD8 480 aaKnown RBP13.11□□□□□ -0.31
PPP1CB-204ENST00000418910 OSCARQ8IYS5 282 aa13.02□□□□□ -0.33
PPP1CB-204ENST00000418910 FBLN2P98095 1184 aa12.92□□□□□ -0.34
PPP1CB-204ENST00000418910 MKRN4PQ13434 485 aaPredicted RBP12.9□□□□□ -0.34
PPP1CB-204ENST00000418910 AKT1S1Q96B36 256 aa12.86□□□□□ -0.35
PPP1CB-204ENST00000418910 CHRDL2Q6WN34 429 aa12.77□□□□□ -0.37
PPP1CB-204ENST00000418910 REM2Q8IYK8 340 aaPredicted RBP12.77□□□□□ -0.37
PPP1CB-204ENST00000418910 SPDYE2BA6NHP3 402 aa12.76□□□□□ -0.37
PPP1CB-204ENST00000418910 SPDYE6P0CI01 402 aa12.76□□□□□ -0.37
PPP1CB-204ENST00000418910 SPDYE2Q495Y8 402 aa12.76□□□□□ -0.37
PPP1CB-204ENST00000418910 SP7Q8TDD2 431 aaPredicted RBP12.7□□□□□ -0.38
PPP1CB-204ENST00000418910 ZNF692Q9BU19 519 aaPredicted RBP12.67□□□□□ -0.38
PPP1CB-204ENST00000418910 PITPNM1O00562 1244 aa12.65□□□□□ -0.38
PPP1CB-204ENST00000418910 SSUH2Q9Y2M2 353 aa12.63□□□□□ -0.39
PPP1CB-204ENST00000418910 PIP4P2Q8N4L2 257 aa12.53□□□□□ -0.4
PPP1CB-204ENST00000418910 PABPN1Q86U42 306 aaKnown RBP eCLIP12.5□□□□□ -0.41
PPP1CB-204ENST00000418910 CLEC11AQ9Y240 323 aa12.5□□□□□ -0.41
PPP1CB-204ENST00000418910 SPDYE1Q8NFV5 336 aaPredicted RBP12.49□□□□□ -0.41
PPP1CB-204ENST00000418910 FXR2P51116 673 aaKnown RBP eCLIP12.46□□□□□ -0.41
PPP1CB-204ENST00000418910 SPDYE4A6NLX3 237 aa12.38□□□□□ -0.43
PPP1CB-204ENST00000418910 PRKAR2AP13861 404 aaKnown RBP12.32□□□□□ -0.44
PPP1CB-204ENST00000418910 PRR29P0C7W0 189 aa12.3□□□□□ -0.44
PPP1CB-204ENST00000418910 HAX1O00165 279 aa12.29□□□□□ -0.44
PPP1CB-204ENST00000418910 CHADLQ6NUI6 762 aa12.27□□□□□ -0.45
PPP1CB-204ENST00000418910 STAG3Q9UJ98 1225 aa12.15□□□□□ -0.46
PPP1CB-204ENST00000418910 EVX2Q03828 476 aa12.13□□□□□ -0.47
PPP1CB-204ENST00000418910 PROM2Q8N271 834 aa12.09□□□□□ -0.47
PPP1CB-204ENST00000418910 C19orf67A6NJJ6 358 aa12.06□□□□□ -0.48
PPP1CB-204ENST00000418910 CREBZFQ9NS37 354 aa12.06□□□□□ -0.48
PPP1CB-204ENST00000418910 FARP1Q9Y4F1 1045 aaPredicted RBP12.06□□□□□ -0.48
PPP1CB-204ENST00000418910 FKBP8Q14318 412 aa12.01□□□□□ -0.49
PPP1CB-204ENST00000418910 CD44P16070 742 aaKnown RBP11.94□□□□□ -0.5
PPP1CB-204ENST00000418910 LHX8Q68G74 356 aa11.91□□□□□ -0.5
PPP1CB-204ENST00000418910 PLSCR2Q9NRY7 297 aa11.88□□□□□ -0.51
PPP1CB-204ENST00000418910 MNX1P50219 401 aaPredicted RBP11.87□□□□□ -0.51
PPP1CB-204ENST00000418910 GABBR2O75899 941 aa11.85□□□□□ -0.51
PPP1CB-204ENST00000418910 NPM1P06748 294 aaKnown RBP eCLIP11.81□□□□□ -0.52
PPP1CB-204ENST00000418910 ZRANB1Q9UGI0 708 aa11.81□□□□□ -0.52
PPP1CB-204ENST00000418910 MIER1Q8N108 512 aa11.79□□□□□ -0.52
PPP1CB-204ENST00000418910 ZNF579Q8NAF0 562 aaKnown RBP11.74□□□□□ -0.53
PPP1CB-204ENST00000418910 PLCD3Q8N3E9 789 aa11.73□□□□□ -0.53
PPP1CB-204ENST00000418910 PAK3O75914 559 aaPredicted RBP11.72□□□□□ -0.53
PPP1CB-204ENST00000418910 PLEKHG5O94827 1062 aa11.72□□□□□ -0.53
PPP1CB-204ENST00000418910 PHF12Q96QT6 1004 aa11.69□□□□□ -0.54
PPP1CB-204ENST00000418910 TSPYL2Q9H2G4 693 aaPredicted RBP11.66□□□□□ -0.54
PPP1CB-204ENST00000418910 CLCN6P51797 869 aa11.64□□□□□ -0.55
PPP1CB-204ENST00000418910 FBXO3Q9UK99 471 aa11.64□□□□□ -0.55
PPP1CB-204ENST00000418910 GALR2O43603 387 aaPredicted RBP11.62□□□□□ -0.55
PPP1CB-204ENST00000418910 POTEIP0CG38 1075 aa11.61□□□□□ -0.55
PPP1CB-204ENST00000418910 RASEFQ8IZ41 740 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms