Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 AC108673.1-201ENST00000510422 1159 ntBASIC28.08■■■□□ 2.09
TTC39CQ8N584 AC044849.2-201ENST00000606596 710 ntBASIC28.08■■■□□ 2.09
TTC39CQ8N584 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.07■■■□□ 2.08
TTC39CQ8N584 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
TTC39CQ8N584 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC28.07■■■□□ 2.08
TTC39CQ8N584 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
TTC39CQ8N584 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.06■■■□□ 2.08
TTC39CQ8N584 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
TTC39CQ8N584 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
TTC39CQ8N584 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC28.05■■■□□ 2.08
TTC39CQ8N584 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
TTC39CQ8N584 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
TTC39CQ8N584 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC28.04■■■□□ 2.08
TTC39CQ8N584 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.04■■■□□ 2.08
TTC39CQ8N584 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.03■■■□□ 2.08
TTC39CQ8N584 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
TTC39CQ8N584 RPS2P35-201ENST00000443417 897 ntBASIC28.01■■■□□ 2.07
TTC39CQ8N584 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
TTC39CQ8N584 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
TTC39CQ8N584 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
TTC39CQ8N584 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28■■■□□ 2.07
TTC39CQ8N584 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
TTC39CQ8N584 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.99■■■□□ 2.07
TTC39CQ8N584 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
TTC39CQ8N584 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
TTC39CQ8N584 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
TTC39CQ8N584 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
TTC39CQ8N584 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.06
TTC39CQ8N584 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.94■■■□□ 2.06
TTC39CQ8N584 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
TTC39CQ8N584 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
TTC39CQ8N584 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
TTC39CQ8N584 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.93■■■□□ 2.06
TTC39CQ8N584 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
TTC39CQ8N584 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
TTC39CQ8N584 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
TTC39CQ8N584 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
TTC39CQ8N584 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.91■■■□□ 2.06
TTC39CQ8N584 MIR6090-201ENST00000622481 60 ntBASIC27.91■■■□□ 2.06
TTC39CQ8N584 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.91■■■□□ 2.06
TTC39CQ8N584 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
TTC39CQ8N584 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.9■■■□□ 2.06
TTC39CQ8N584 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
TTC39CQ8N584 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
TTC39CQ8N584 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.9■■■□□ 2.06
TTC39CQ8N584 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.9■■■□□ 2.06
TTC39CQ8N584 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
TTC39CQ8N584 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
TTC39CQ8N584 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC27.89■■■□□ 2.06
TTC39CQ8N584 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
TTC39CQ8N584 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.88■■■□□ 2.05
TTC39CQ8N584 ABCB10P1-201ENST00000614297 2181 ntBASIC27.88■■■□□ 2.05
TTC39CQ8N584 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.88■■■□□ 2.05
TTC39CQ8N584 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
TTC39CQ8N584 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.86■■■□□ 2.05
TTC39CQ8N584 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
TTC39CQ8N584 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
TTC39CQ8N584 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
TTC39CQ8N584 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.85■■■□□ 2.05
TTC39CQ8N584 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.85■■■□□ 2.05
TTC39CQ8N584 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
TTC39CQ8N584 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
TTC39CQ8N584 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.83■■■□□ 2.05
TTC39CQ8N584 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.83■■■□□ 2.05
TTC39CQ8N584 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
TTC39CQ8N584 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
TTC39CQ8N584 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
TTC39CQ8N584 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
TTC39CQ8N584 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
TTC39CQ8N584 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.8■■■□□ 2.04
TTC39CQ8N584 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
TTC39CQ8N584 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC27.8■■■□□ 2.04
TTC39CQ8N584 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.79■■■□□ 2.04
TTC39CQ8N584 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
TTC39CQ8N584 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
TTC39CQ8N584 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
TTC39CQ8N584 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
TTC39CQ8N584 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
TTC39CQ8N584 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
TTC39CQ8N584 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
TTC39CQ8N584 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
TTC39CQ8N584 AC127502.1-201ENST00000399971 1502 ntBASIC27.77■■■□□ 2.04
TTC39CQ8N584 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
TTC39CQ8N584 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.76■■■□□ 2.03
TTC39CQ8N584 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
TTC39CQ8N584 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
TTC39CQ8N584 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
TTC39CQ8N584 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
TTC39CQ8N584 DUX4L29-201ENST00000425409 679 ntBASIC27.72■■■□□ 2.03
TTC39CQ8N584 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
TTC39CQ8N584 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
TTC39CQ8N584 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
TTC39CQ8N584 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
TTC39CQ8N584 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
TTC39CQ8N584 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.69■■■□□ 2.02
TTC39CQ8N584 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
TTC39CQ8N584 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
TTC39CQ8N584 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27.69■■■□□ 2.02
TTC39CQ8N584 AP004833.2-201ENST00000532228 1454 ntBASIC27.69■■■□□ 2.02
TTC39CQ8N584 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms