RNA–Protein interactions for RNA: ENST00000419308.6

FOXA2-202, Transcript of forkhead box A2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FOXA2, Length 2,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-202ENST00000419308 NISCHQ9Y2I1 1504 aa56.2■■■■■ 6.59
FOXA2-202ENST00000419308 CCDC180Q9P1Z9 1646 aa48.06■■■■■ 5.28
FOXA2-202ENST00000419308 ZCCHC6Q5VYS8 1495 aaKnown RBP47.5■■■■■ 5.19
FOXA2-202ENST00000419308 SHROOM4Q9ULL8 1493 aa47.38■■■■■ 5.18
FOXA2-202ENST00000419308 DCAF8L2P0C7V8 631 aa46.37■■■■■ 5.01
FOXA2-202ENST00000419308 SUPT5HO00267 1087 aaKnown RBP46.33■■■■■ 5.01
FOXA2-202ENST00000419308 DCAF1Q9Y4B6 1507 aa46.25■■■■■ 4.99
FOXA2-202ENST00000419308 MYO15BQ96JP2 1530 aa45.07■■■■■ 4.8
FOXA2-202ENST00000419308 CHIC1Q5VXU3 224 aa45.01■■■■■ 4.8
FOXA2-202ENST00000419308 SCRIBQ14160 1630 aa44.78■■■■■ 4.76
FOXA2-202ENST00000419308 ABCC9O60706 1549 aa44.75■■■■■ 4.75
FOXA2-202ENST00000419308 NACADO15069 1562 aa44.46■■■■■ 4.71
FOXA2-202ENST00000419308 RSF1Q96T23 1441 aaPredicted RBP44.3■■■■■ 4.68
FOXA2-202ENST00000419308 RB1CC1Q8TDY2 1594 aa43.81■■■■■ 4.6
FOXA2-202ENST00000419308 CECR2Q9BXF3 1484 aa43.76■■■■■ 4.6
FOXA2-202ENST00000419308 MROH2BQ7Z745 1585 aa43.62■■■■■ 4.57
FOXA2-202ENST00000419308 LOC105371045A0A1W2PR82 267 aa43.55■■■■■ 4.56
FOXA2-202ENST00000419308 WIZO95785 1651 aa43.36■■■■■ 4.53
FOXA2-202ENST00000419308 TRIM41Q8WV44 630 aa43.27■■■■■ 4.52
FOXA2-202ENST00000419308 BAZ1AQ9NRL2 1556 aaPredicted RBP43.21■■■■■ 4.51
FOXA2-202ENST00000419308 PCGF6Q9BYE7 350 aa43.16■■■■■ 4.5
FOXA2-202ENST00000419308 UNC13AQ9UPW8 1703 aa43.11■■■■■ 4.49
FOXA2-202ENST00000419308 HRCP23327 699 aa43.03■■■■■ 4.48
FOXA2-202ENST00000419308 SMARCA4P51532 1647 aa42.88■■■■■ 4.45
FOXA2-202ENST00000419308 FAM9AQ8IZU1 332 aaPredicted RBP42.77■■■■■ 4.44
FOXA2-202ENST00000419308 TOP2AP11388 1531 aaKnown RBP42.76■■■■■ 4.44
FOXA2-202ENST00000419308 EIF4G1Q04637 1599 aaKnown RBP42.74■■■■■ 4.43
FOXA2-202ENST00000419308 BICRAQ9NZM4 1560 aa42.58■■■■■ 4.41
FOXA2-202ENST00000419308 TRIM26Q12899 539 aaPredicted RBP42.55■■■■■ 4.4
FOXA2-202ENST00000419308 CCDC88BA6NC98 1476 aa42.5■■■■■ 4.39
FOXA2-202ENST00000419308 SMARCA2P51531 1590 aa42.49■■■■■ 4.39
FOXA2-202ENST00000419308 PABPN1Q86U42 306 aaKnown RBP eCLIP42.45■■■■■ 4.39
FOXA2-202ENST00000419308 EHMT2Q96KQ7 1210 aa42.29■■■■■ 4.36
FOXA2-202ENST00000419308 ABCC8Q09428 1581 aa42.23■■■■■ 4.35
FOXA2-202ENST00000419308 PEG3Q9GZU2 1588 aa42.16■■■■■ 4.34
FOXA2-202ENST00000419308 PPARGC1BQ86YN6 1023 aaKnown RBP42.05■■■■■ 4.32
FOXA2-202ENST00000419308 ATAD2BQ9ULI0 1458 aa41.83■■■■■ 4.29
FOXA2-202ENST00000419308 SOGA1O94964 1423 aa41.76■■■■■ 4.28
FOXA2-202ENST00000419308 BAZ1BQ9UIG0 1483 aaKnown RBP41.68■■■■■ 4.26
FOXA2-202ENST00000419308 EEA1Q15075 1411 aa41.65■■■■■ 4.26
FOXA2-202ENST00000419308 WRNQ14191 1432 aaPredicted RBP eCLIP41.62■■■■■ 4.25
FOXA2-202ENST00000419308 RUSC2Q8N2Y8 1516 aa41.56■■■■■ 4.24
FOXA2-202ENST00000419308 CSRNP3Q8WYN3 585 aa41.52■■■■■ 4.24
FOXA2-202ENST00000419308 ZEB1P37275 1124 aaPredicted RBP41.5■■■■■ 4.23
FOXA2-202ENST00000419308 TNIKQ9UKE5 1360 aa41.46■■■■■ 4.23
FOXA2-202ENST00000419308 CEP162Q5TB80 1403 aa41.45■■■■■ 4.23
FOXA2-202ENST00000419308 SYNJ1O43426 1573 aa41.43■■■■■ 4.22
FOXA2-202ENST00000419308 GOLGA3Q08378 1498 aa41.28■■■■■ 4.2
FOXA2-202ENST00000419308 UBTFP17480 764 aaKnown RBP41.24■■■■■ 4.19
FOXA2-202ENST00000419308 HMGXB3Q12766 1538 aa41.12■■■■■ 4.17
FOXA2-202ENST00000419308 NCAPD3P42695 1498 aa41.12■■■■■ 4.17
FOXA2-202ENST00000419308 CEP164Q9UPV0 1460 aa41.09■■■■■ 4.17
FOXA2-202ENST00000419308 KIF21BO75037 1637 aa41.09■■■■■ 4.17
FOXA2-202ENST00000419308 TOP2BQ02880 1626 aa41.02■■■■■ 4.16
FOXA2-202ENST00000419308 BIVM-ERCC5R4GMW8 1640 aa40.9■■■■■ 4.14
FOXA2-202ENST00000419308 TTBK1Q5TCY1 1321 aaPredicted RBP40.87■■■■■ 4.13
FOXA2-202ENST00000419308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.81■■■■■ 4.12
FOXA2-202ENST00000419308 RAPGEF2Q9Y4G8 1499 aa40.79■■■■■ 4.12
FOXA2-202ENST00000419308 CLIP1P30622 1438 aa40.76■■■■■ 4.12
FOXA2-202ENST00000419308 CCER1Q8TC90 406 aaPredicted RBP40.71■■■■■ 4.11
FOXA2-202ENST00000419308 CFTRP13569 1480 aa40.69■■■■■ 4.1
FOXA2-202ENST00000419308 CUX1P39880 1505 aa40.64■■■■■ 4.1
FOXA2-202ENST00000419308 VPS8Q8N3P4 1428 aa40.57■■■■■ 4.09
FOXA2-202ENST00000419308 PRXQ9BXM0 1461 aa40.51■■■■■ 4.08
FOXA2-202ENST00000419308 ERICH3Q5RHP9 1530 aa40.51■■■■■ 4.08
FOXA2-202ENST00000419308 PRDM2Q13029 1718 aa40.42■■■■■ 4.06
FOXA2-202ENST00000419308 KIF27Q86VH2 1401 aa40.38■■■■■ 4.05
FOXA2-202ENST00000419308 RANGAP1P46060 587 aaPredicted RBP40.35■■■■■ 4.05
FOXA2-202ENST00000419308 APLP2Q06481 763 aa40.26■■■■■ 4.04
FOXA2-202ENST00000419308 CADPSQ9ULU8 1353 aa40.26■■■■■ 4.04
FOXA2-202ENST00000419308 CC2D2AQ9P2K1 1620 aa40.2■■■■■ 4.03
FOXA2-202ENST00000419308 ARAP1Q96P48 1450 aa40.16■■■■■ 4.02
FOXA2-202ENST00000419308 HNRNPUL2Q1KMD3 747 aaKnown RBP40.07■■■■■ 4
FOXA2-202ENST00000419308 CUX2O14529 1486 aa40.02■■■■■ 4
FOXA2-202ENST00000419308 FGD5Q6ZNL6 1462 aa39.96■■■■□ 3.99
FOXA2-202ENST00000419308 IGF1RP08069 1367 aa39.95■■■■□ 3.99
FOXA2-202ENST00000419308 ARHGAP35Q9NRY4 1499 aa39.88■■■■□ 3.97
FOXA2-202ENST00000419308 FANCD2Q9BXW9 1451 aa39.85■■■■□ 3.97
FOXA2-202ENST00000419308 KANK4Q5T7N3 995 aaPredicted RBP39.81■■■■□ 3.96
FOXA2-202ENST00000419308 CARMIL1Q5VZK9 1371 aa39.76■■■■□ 3.96
FOXA2-202ENST00000419308 DIEXFQ68CQ4 756 aaKnown RBP39.73■■■■□ 3.95
FOXA2-202ENST00000419308 DNMBPQ6XZF7 1577 aa39.67■■■■□ 3.94
FOXA2-202ENST00000419308 NESP48681 1621 aa39.62■■■■□ 3.93
FOXA2-202ENST00000419308 RRBP1Q9P2E9 1410 aaKnown RBP39.6■■■■□ 3.93
FOXA2-202ENST00000419308 TOPBP1Q92547 1522 aa39.58■■■■□ 3.93
FOXA2-202ENST00000419308 ZNF316A6NFI3 1004 aaPredicted RBP39.57■■■■□ 3.93
FOXA2-202ENST00000419308 ABCA10Q8WWZ4 1543 aa39.54■■■■□ 3.92
FOXA2-202ENST00000419308 POLA1P09884 1462 aaPredicted RBP39.54■■■■□ 3.92
FOXA2-202ENST00000419308 RAD54L2Q9Y4B4 1467 aa39.54■■■■□ 3.92
FOXA2-202ENST00000419308 MAP3K1Q13233 1512 aa39.43■■■■□ 3.9
FOXA2-202ENST00000419308 LAMC3Q9Y6N6 1575 aa39.42■■■■□ 3.9
FOXA2-202ENST00000419308 TIAM1Q13009 1591 aa39.41■■■■□ 3.9
FOXA2-202ENST00000419308 CCNB3Q8WWL7 1395 aa39.41■■■■□ 3.9
FOXA2-202ENST00000419308 DHX57Q6P158 1386 aaKnown RBP39.38■■■■□ 3.9
FOXA2-202ENST00000419308 CLSPNQ9HAW4 1339 aa39.37■■■■□ 3.89
FOXA2-202ENST00000419308 SCAF1Q9H7N4 1312 aaKnown RBP39.34■■■■□ 3.89
FOXA2-202ENST00000419308 CUL7Q14999 1698 aa39.31■■■■□ 3.88
FOXA2-202ENST00000419308 URB2Q14146 1524 aaKnown RBP39.3■■■■□ 3.88
FOXA2-202ENST00000419308 FHAD1B1AJZ9 1412 aa39.3■■■■□ 3.88
FOXA2-202ENST00000419308 LRRC9Q6ZRR7 1453 aa39.25■■■■□ 3.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms