RNA–Protein interactions for RNA: ENST00000368408.3

EFNA3-201, Transcript of ephrin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA3, Length 1,782 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3-201ENST00000368408 NISCHQ9Y2I1 1504 aa58.1■■■■■ 6.89
EFNA3-201ENST00000368408 CCDC180Q9P1Z9 1646 aa50.41■■■■■ 5.66
EFNA3-201ENST00000368408 ZCCHC6Q5VYS8 1495 aaKnown RBP48.93■■■■■ 5.42
EFNA3-201ENST00000368408 DCAF1Q9Y4B6 1507 aa48.12■■■■■ 5.29
EFNA3-201ENST00000368408 SHROOM4Q9ULL8 1493 aa47.6■■■■■ 5.21
EFNA3-201ENST00000368408 DCAF8L2P0C7V8 631 aa47.56■■■■■ 5.2
EFNA3-201ENST00000368408 ABCC9O60706 1549 aa47.53■■■■■ 5.2
EFNA3-201ENST00000368408 MYO15BQ96JP2 1530 aa47.36■■■■■ 5.17
EFNA3-201ENST00000368408 NACADO15069 1562 aa46.82■■■■■ 5.08
EFNA3-201ENST00000368408 SCRIBQ14160 1630 aa46.33■■■■■ 5.01
EFNA3-201ENST00000368408 RB1CC1Q8TDY2 1594 aa46.23■■■■■ 4.99
EFNA3-201ENST00000368408 SUPT5HO00267 1087 aaKnown RBP46.09■■■■■ 4.97
EFNA3-201ENST00000368408 UNC13AQ9UPW8 1703 aa45.32■■■■■ 4.85
EFNA3-201ENST00000368408 RSF1Q96T23 1441 aaPredicted RBP45.28■■■■■ 4.84
EFNA3-201ENST00000368408 CECR2Q9BXF3 1484 aa45.05■■■■■ 4.8
EFNA3-201ENST00000368408 BICRAQ9NZM4 1560 aa44.88■■■■■ 4.77
EFNA3-201ENST00000368408 MROH2BQ7Z745 1585 aa44.87■■■■■ 4.77
EFNA3-201ENST00000368408 BAZ1AQ9NRL2 1556 aaPredicted RBP44.8■■■■■ 4.76
EFNA3-201ENST00000368408 CHIC1Q5VXU3 224 aa44.55■■■■■ 4.72
EFNA3-201ENST00000368408 SMARCA4P51532 1647 aa44.52■■■■■ 4.72
EFNA3-201ENST00000368408 PABPN1Q86U42 306 aaKnown RBP eCLIP44.52■■■■■ 4.72
EFNA3-201ENST00000368408 WIZO95785 1651 aa44.51■■■■■ 4.72
EFNA3-201ENST00000368408 TOP2AP11388 1531 aaKnown RBP44.12■■■■■ 4.65
EFNA3-201ENST00000368408 PEG3Q9GZU2 1588 aa44.03■■■■■ 4.64
EFNA3-201ENST00000368408 SMARCA2P51531 1590 aa43.72■■■■■ 4.59
EFNA3-201ENST00000368408 CCDC88BA6NC98 1476 aa43.66■■■■■ 4.58
EFNA3-201ENST00000368408 ATAD2BQ9ULI0 1458 aa43.66■■■■■ 4.58
EFNA3-201ENST00000368408 EIF4G1Q04637 1599 aaKnown RBP43.65■■■■■ 4.58
EFNA3-201ENST00000368408 DNAJC5BQ9UF47 199 aa43.41■■■■■ 4.54
EFNA3-201ENST00000368408 BAZ1BQ9UIG0 1483 aaKnown RBP43.4■■■■■ 4.54
EFNA3-201ENST00000368408 TRIM41Q8WV44 630 aa43.36■■■■■ 4.53
EFNA3-201ENST00000368408 NCAPD3P42695 1498 aa43.22■■■■■ 4.51
EFNA3-201ENST00000368408 HMGXB3Q12766 1538 aa43.2■■■■■ 4.51
EFNA3-201ENST00000368408 CC2D2AQ9P2K1 1620 aa42.96■■■■■ 4.47
EFNA3-201ENST00000368408 ABCC8Q09428 1581 aa42.86■■■■■ 4.45
EFNA3-201ENST00000368408 LOC105371045A0A1W2PR82 267 aa42.79■■■■■ 4.44
EFNA3-201ENST00000368408 WRNQ14191 1432 aaPredicted RBP eCLIP42.57■■■■■ 4.41
EFNA3-201ENST00000368408 FAM9AQ8IZU1 332 aaPredicted RBP42.49■■■■■ 4.39
EFNA3-201ENST00000368408 CFTRP13569 1480 aa42.41■■■■■ 4.38
EFNA3-201ENST00000368408 SYNJ1O43426 1573 aa42.37■■■■■ 4.37
EFNA3-201ENST00000368408 EEA1Q15075 1411 aa42.33■■■■■ 4.37
EFNA3-201ENST00000368408 SOGA1O94964 1423 aa42.21■■■■■ 4.35
EFNA3-201ENST00000368408 PRDM2Q13029 1718 aa42.2■■■■■ 4.35
EFNA3-201ENST00000368408 TOP2BQ02880 1626 aa42.2■■■■■ 4.35
EFNA3-201ENST00000368408 BIVM-ERCC5R4GMW8 1640 aa42.15■■■■■ 4.34
EFNA3-201ENST00000368408 CADPSQ9ULU8 1353 aa42.12■■■■■ 4.33
EFNA3-201ENST00000368408 RUSC2Q8N2Y8 1516 aa42.01■■■■■ 4.32
EFNA3-201ENST00000368408 CSRNP3Q8WYN3 585 aa41.97■■■■■ 4.31
EFNA3-201ENST00000368408 CUX1P39880 1505 aa41.93■■■■■ 4.3
EFNA3-201ENST00000368408 EHMT2Q96KQ7 1210 aa41.77■■■■■ 4.28
EFNA3-201ENST00000368408 TNIKQ9UKE5 1360 aa41.73■■■■■ 4.27
EFNA3-201ENST00000368408 KIF21BO75037 1637 aa41.73■■■■■ 4.27
EFNA3-201ENST00000368408 GOLGA3Q08378 1498 aa41.71■■■■■ 4.27
EFNA3-201ENST00000368408 CEP164Q9UPV0 1460 aa41.68■■■■■ 4.26
EFNA3-201ENST00000368408 FANCD2Q9BXW9 1451 aa41.63■■■■■ 4.25
EFNA3-201ENST00000368408 LAMC3Q9Y6N6 1575 aa41.62■■■■■ 4.25
EFNA3-201ENST00000368408 NESP48681 1621 aa41.5■■■■■ 4.23
EFNA3-201ENST00000368408 CEP162Q5TB80 1403 aa41.49■■■■■ 4.23
EFNA3-201ENST00000368408 KIF27Q86VH2 1401 aa41.45■■■■■ 4.23
EFNA3-201ENST00000368408 DNMBPQ6XZF7 1577 aa41.39■■■■■ 4.22
EFNA3-201ENST00000368408 UBTFP17480 764 aaKnown RBP41.39■■■■■ 4.22
EFNA3-201ENST00000368408 PCGF6Q9BYE7 350 aa41.39■■■■■ 4.22
EFNA3-201ENST00000368408 PRXQ9BXM0 1461 aa41.37■■■■■ 4.21
EFNA3-201ENST00000368408 ERICH3Q5RHP9 1530 aa41.36■■■■■ 4.21
EFNA3-201ENST00000368408 FGD5Q6ZNL6 1462 aa41.36■■■■■ 4.21
EFNA3-201ENST00000368408 TRIM26Q12899 539 aaPredicted RBP41.35■■■■■ 4.21
EFNA3-201ENST00000368408 RAPGEF2Q9Y4G8 1499 aa41.33■■■■■ 4.21
EFNA3-201ENST00000368408 PDS5BQ9NTI5 1447 aa41.26■■■■■ 4.2
EFNA3-201ENST00000368408 TOPBP1Q92547 1522 aa41.26■■■■■ 4.2
EFNA3-201ENST00000368408 CUX2O14529 1486 aa41.19■■■■■ 4.18
EFNA3-201ENST00000368408 POLA1P09884 1462 aaPredicted RBP41.1■■■■■ 4.17
EFNA3-201ENST00000368408 URB2Q14146 1524 aaKnown RBP41.09■■■■■ 4.17
EFNA3-201ENST00000368408 ABCA10Q8WWZ4 1543 aa41.06■■■■■ 4.16
EFNA3-201ENST00000368408 IGF1RP08069 1367 aa41.06■■■■■ 4.16
EFNA3-201ENST00000368408 CLIP1P30622 1438 aa41.04■■■■■ 4.16
EFNA3-201ENST00000368408 KIF21AQ7Z4S6 1674 aa41.01■■■■■ 4.16
EFNA3-201ENST00000368408 RAD54L2Q9Y4B4 1467 aa40.93■■■■■ 4.14
EFNA3-201ENST00000368408 ERCC6Q03468 1493 aa40.9■■■■■ 4.14
EFNA3-201ENST00000368408 WDR97A6NE52 1622 aa40.87■■■■■ 4.13
EFNA3-201ENST00000368408 CARMIL1Q5VZK9 1371 aa40.82■■■■■ 4.13
EFNA3-201ENST00000368408 VPS8Q8N3P4 1428 aa40.8■■■■■ 4.12
EFNA3-201ENST00000368408 HRCP23327 699 aa40.77■■■■■ 4.12
EFNA3-201ENST00000368408 MRC2Q9UBG0 1479 aa40.71■■■■■ 4.11
EFNA3-201ENST00000368408 CUL7Q14999 1698 aa40.68■■■■■ 4.1
EFNA3-201ENST00000368408 ABCA5Q8WWZ7 1642 aa40.67■■■■■ 4.1
EFNA3-201ENST00000368408 PPARGC1BQ86YN6 1023 aaKnown RBP40.63■■■■■ 4.09
EFNA3-201ENST00000368408 TARBP1Q13395 1621 aaKnown RBP40.62■■■■■ 4.09
EFNA3-201ENST00000368408 ARAP1Q96P48 1450 aa40.61■■■■■ 4.09
EFNA3-201ENST00000368408 GAPVD1Q14C86 1478 aa40.51■■■■■ 4.08
EFNA3-201ENST00000368408 WDR62O43379 1518 aa40.5■■■■■ 4.07
EFNA3-201ENST00000368408 ARHGAP35Q9NRY4 1499 aa40.49■■■■■ 4.07
EFNA3-201ENST00000368408 THOC2Q8NI27 1593 aaKnown RBP40.47■■■■■ 4.07
EFNA3-201ENST00000368408 TDRD9Q8NDG6 1382 aaKnown RBP40.46■■■■■ 4.07
EFNA3-201ENST00000368408 RANGAP1P46060 587 aaPredicted RBP40.43■■■■■ 4.06
EFNA3-201ENST00000368408 IFT140Q96RY7 1462 aa40.31■■■■■ 4.04
EFNA3-201ENST00000368408 APLP2Q06481 763 aa40.29■■■■■ 4.04
EFNA3-201ENST00000368408 CTTNBP2Q8WZ74 1663 aa40.28■■■■■ 4.04
EFNA3-201ENST00000368408 PBRM1Q86U86 1689 aa40.24■■■■■ 4.03
EFNA3-201ENST00000368408 EFCAB5A4FU69 1503 aa40.19■■■■■ 4.02
EFNA3-201ENST00000368408 TTBK1Q5TCY1 1321 aaPredicted RBP40.14■■■■■ 4.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms