RNA–Protein interactions for RNA: ENST00000295082.2

KCNF1-201, Transcript of potassium voltage-gated channel modifier subfamily F member 1, humanhuman

APPRIS P1 BASIC

Gene KCNF1, Length 2,289 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1-201ENST00000295082 NISCHQ9Y2I1 1504 aa54.63■■■■■ 6.34
KCNF1-201ENST00000295082 SHROOM4Q9ULL8 1493 aa46.93■■■■■ 5.1
KCNF1-201ENST00000295082 ZCCHC6Q5VYS8 1495 aaKnown RBP46.34■■■■■ 5.01
KCNF1-201ENST00000295082 SUPT5HO00267 1087 aaKnown RBP46.33■■■■■ 5.01
KCNF1-201ENST00000295082 CCDC180Q9P1Z9 1646 aa46.21■■■■■ 4.99
KCNF1-201ENST00000295082 CHIC1Q5VXU3 224 aa45.38■■■■■ 4.85
KCNF1-201ENST00000295082 MYO15BQ96JP2 1530 aa45.33■■■■■ 4.85
KCNF1-201ENST00000295082 DCAF8L2P0C7V8 631 aa45.05■■■■■ 4.8
KCNF1-201ENST00000295082 HRCP23327 699 aa45.04■■■■■ 4.8
KCNF1-201ENST00000295082 DCAF1Q9Y4B6 1507 aa44.87■■■■■ 4.77
KCNF1-201ENST00000295082 PCGF6Q9BYE7 350 aa44.55■■■■■ 4.72
KCNF1-201ENST00000295082 LOC105371045A0A1W2PR82 267 aa44.02■■■■■ 4.64
KCNF1-201ENST00000295082 PPARGC1BQ86YN6 1023 aaKnown RBP43.9■■■■■ 4.62
KCNF1-201ENST00000295082 ABCC9O60706 1549 aa43.84■■■■■ 4.61
KCNF1-201ENST00000295082 TRIM26Q12899 539 aaPredicted RBP43.65■■■■■ 4.58
KCNF1-201ENST00000295082 RSF1Q96T23 1441 aaPredicted RBP43.46■■■■■ 4.55
KCNF1-201ENST00000295082 SCRIBQ14160 1630 aa43.36■■■■■ 4.53
KCNF1-201ENST00000295082 TRIM41Q8WV44 630 aa43.15■■■■■ 4.5
KCNF1-201ENST00000295082 RB1CC1Q8TDY2 1594 aa43.12■■■■■ 4.49
KCNF1-201ENST00000295082 ZEB1P37275 1124 aaPredicted RBP43.02■■■■■ 4.48
KCNF1-201ENST00000295082 FAM9AQ8IZU1 332 aaPredicted RBP42.76■■■■■ 4.44
KCNF1-201ENST00000295082 NACADO15069 1562 aa42.58■■■■■ 4.41
KCNF1-201ENST00000295082 CECR2Q9BXF3 1484 aa42.54■■■■■ 4.4
KCNF1-201ENST00000295082 MROH2BQ7Z745 1585 aa42.48■■■■■ 4.39
KCNF1-201ENST00000295082 EHMT2Q96KQ7 1210 aa42.34■■■■■ 4.37
KCNF1-201ENST00000295082 WIZO95785 1651 aa42.3■■■■■ 4.36
KCNF1-201ENST00000295082 BAZ1AQ9NRL2 1556 aaPredicted RBP42.12■■■■■ 4.33
KCNF1-201ENST00000295082 EIF4G1Q04637 1599 aaKnown RBP42.02■■■■■ 4.32
KCNF1-201ENST00000295082 SCAF1Q9H7N4 1312 aaKnown RBP41.83■■■■■ 4.29
KCNF1-201ENST00000295082 PELP1Q8IZL8 1130 aaKnown RBP41.83■■■■■ 4.29
KCNF1-201ENST00000295082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP41.7■■■■■ 4.27
KCNF1-201ENST00000295082 CCER1Q8TC90 406 aaPredicted RBP41.69■■■■■ 4.26
KCNF1-201ENST00000295082 TOP2AP11388 1531 aaKnown RBP41.67■■■■■ 4.26
KCNF1-201ENST00000295082 WRNQ14191 1432 aaPredicted RBP eCLIP41.58■■■■■ 4.25
KCNF1-201ENST00000295082 ABCC8Q09428 1581 aa41.55■■■■■ 4.24
KCNF1-201ENST00000295082 CCDC88BA6NC98 1476 aa41.52■■■■■ 4.24
KCNF1-201ENST00000295082 SMARCA4P51532 1647 aa41.49■■■■■ 4.23
KCNF1-201ENST00000295082 SMARCA2P51531 1590 aa41.45■■■■■ 4.23
KCNF1-201ENST00000295082 CEP162Q5TB80 1403 aa41.41■■■■■ 4.22
KCNF1-201ENST00000295082 TNIKQ9UKE5 1360 aa41.34■■■■■ 4.21
KCNF1-201ENST00000295082 ACIN1Q9UKV3 1341 aaKnown RBP41.29■■■■■ 4.2
KCNF1-201ENST00000295082 SOGA1O94964 1423 aa41.28■■■■■ 4.2
KCNF1-201ENST00000295082 EEA1Q15075 1411 aa41.27■■■■■ 4.2
KCNF1-201ENST00000295082 DIEXFQ68CQ4 756 aaKnown RBP41.21■■■■■ 4.19
KCNF1-201ENST00000295082 TTBK1Q5TCY1 1321 aaPredicted RBP41.16■■■■■ 4.18
KCNF1-201ENST00000295082 CSRNP3Q8WYN3 585 aa41.14■■■■■ 4.18
KCNF1-201ENST00000295082 UNC13AQ9UPW8 1703 aa41.13■■■■■ 4.18
KCNF1-201ENST00000295082 NEUROD1Q13562 356 aa41.13■■■■■ 4.17
KCNF1-201ENST00000295082 RUSC2Q8N2Y8 1516 aa41.03■■■■■ 4.16
KCNF1-201ENST00000295082 UBTFP17480 764 aaKnown RBP41.01■■■■■ 4.16
KCNF1-201ENST00000295082 CENPBP07199 599 aaPredicted RBP41.01■■■■■ 4.16
KCNF1-201ENST00000295082 GOLGA3Q08378 1498 aa40.99■■■■■ 4.15
KCNF1-201ENST00000295082 GTF3C3Q9Y5Q9 886 aa40.79■■■■■ 4.12
KCNF1-201ENST00000295082 ZNF316A6NFI3 1004 aaPredicted RBP40.78■■■■■ 4.12
KCNF1-201ENST00000295082 CEP164Q9UPV0 1460 aa40.69■■■■■ 4.1
KCNF1-201ENST00000295082 PEG3Q9GZU2 1588 aa40.68■■■■■ 4.1
KCNF1-201ENST00000295082 KIF21BO75037 1637 aa40.66■■■■■ 4.1
KCNF1-201ENST00000295082 SYNJ1O43426 1573 aa40.58■■■■■ 4.09
KCNF1-201ENST00000295082 BICRAQ9NZM4 1560 aa40.57■■■■■ 4.09
KCNF1-201ENST00000295082 CLIP1P30622 1438 aa40.52■■■■■ 4.08
KCNF1-201ENST00000295082 PABPN1Q86U42 306 aaKnown RBP eCLIP40.49■■■■■ 4.07
KCNF1-201ENST00000295082 HNRNPUL2Q1KMD3 747 aaKnown RBP40.45■■■■■ 4.07
KCNF1-201ENST00000295082 VPS8Q8N3P4 1428 aa40.44■■■■■ 4.06
KCNF1-201ENST00000295082 BAZ1BQ9UIG0 1483 aaKnown RBP40.42■■■■■ 4.06
KCNF1-201ENST00000295082 APLP2Q06481 763 aa40.29■■■■■ 4.04
KCNF1-201ENST00000295082 ATAD2BQ9ULI0 1458 aa40.27■■■■■ 4.04
KCNF1-201ENST00000295082 RAPGEF2Q9Y4G8 1499 aa40.26■■■■■ 4.04
KCNF1-201ENST00000295082 MIER1Q8N108 512 aa40.22■■■■■ 4.03
KCNF1-201ENST00000295082 YTHDC1Q96MU7 727 aaKnown RBP40.21■■■■■ 4.03
KCNF1-201ENST00000295082 TOP2BQ02880 1626 aa40.06■■■■■ 4
KCNF1-201ENST00000295082 RANGAP1P46060 587 aaPredicted RBP39.96■■■■□ 3.99
KCNF1-201ENST00000295082 CLSPNQ9HAW4 1339 aa39.93■■■■□ 3.98
KCNF1-201ENST00000295082 BIVM-ERCC5R4GMW8 1640 aa39.92■■■■□ 3.98
KCNF1-201ENST00000295082 ERICH3Q5RHP9 1530 aa39.91■■■■□ 3.98
KCNF1-201ENST00000295082 MYT1Q01538 1121 aa39.9■■■■□ 3.98
KCNF1-201ENST00000295082 PRXQ9BXM0 1461 aa39.83■■■■□ 3.97
KCNF1-201ENST00000295082 ARAP1Q96P48 1450 aa39.79■■■■□ 3.96
KCNF1-201ENST00000295082 DHX57Q6P158 1386 aaKnown RBP39.79■■■■□ 3.96
KCNF1-201ENST00000295082 KANK4Q5T7N3 995 aaPredicted RBP39.63■■■■□ 3.93
KCNF1-201ENST00000295082 RRBP1Q9P2E9 1410 aaKnown RBP39.6■■■■□ 3.93
KCNF1-201ENST00000295082 KIF27Q86VH2 1401 aa39.52■■■■□ 3.92
KCNF1-201ENST00000295082 CUX1P39880 1505 aa39.52■■■■□ 3.92
KCNF1-201ENST00000295082 CUX2O14529 1486 aa39.48■■■■□ 3.91
KCNF1-201ENST00000295082 HMGXB3Q12766 1538 aa39.44■■■■□ 3.9
KCNF1-201ENST00000295082 CCNB3Q8WWL7 1395 aa39.39■■■■□ 3.9
KCNF1-201ENST00000295082 NCAPD3P42695 1498 aa39.39■■■■□ 3.9
KCNF1-201ENST00000295082 ARHGAP35Q9NRY4 1499 aa39.35■■■■□ 3.89
KCNF1-201ENST00000295082 CFTRP13569 1480 aa39.25■■■■□ 3.87
KCNF1-201ENST00000295082 SUPT16HQ9Y5B9 1047 aaKnown RBP39.18■■■■□ 3.86
KCNF1-201ENST00000295082 ITGAEP38570 1179 aa39.12■■■■□ 3.85
KCNF1-201ENST00000295082 MAP3K1Q13233 1512 aa39.1■■■■□ 3.85
KCNF1-201ENST00000295082 RAB3GAP2Q9H2M9 1393 aa39.09■■■■□ 3.85
KCNF1-201ENST00000295082 TIAM1Q13009 1591 aa39.06■■■■□ 3.84
KCNF1-201ENST00000295082 MAPKBP1O60336 1514 aa39.04■■■■□ 3.84
KCNF1-201ENST00000295082 IGF1RP08069 1367 aa39.01■■■■□ 3.83
KCNF1-201ENST00000295082 PRDM2Q13029 1718 aa39■■■■□ 3.83
KCNF1-201ENST00000295082 SETD5Q9C0A6 1442 aa38.94■■■■□ 3.82
KCNF1-201ENST00000295082 LRRC9Q6ZRR7 1453 aa38.9■■■■□ 3.82
KCNF1-201ENST00000295082 CARMIL1Q5VZK9 1371 aa38.87■■■■□ 3.81
KCNF1-201ENST00000295082 PHLDB1Q86UU1 1377 aa38.8■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms