RNA–Protein interactions for RNA: ENST00000590941.5

RUNDC3A-206, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-206ENST00000590941 NISCHQ9Y2I1 1504 aa57.8■■■■■ 6.84
RUNDC3A-206ENST00000590941 CCDC180Q9P1Z9 1646 aa50.3■■■■■ 5.64
RUNDC3A-206ENST00000590941 ZCCHC6Q5VYS8 1495 aaKnown RBP48.7■■■■■ 5.39
RUNDC3A-206ENST00000590941 DCAF1Q9Y4B6 1507 aa47.95■■■■■ 5.27
RUNDC3A-206ENST00000590941 DCAF8L2P0C7V8 631 aa47.32■■■■■ 5.17
RUNDC3A-206ENST00000590941 SHROOM4Q9ULL8 1493 aa47.27■■■■■ 5.16
RUNDC3A-206ENST00000590941 MYO15BQ96JP2 1530 aa47.21■■■■■ 5.15
RUNDC3A-206ENST00000590941 ABCC9O60706 1549 aa46.8■■■■■ 5.08
RUNDC3A-206ENST00000590941 NACADO15069 1562 aa46.69■■■■■ 5.06
RUNDC3A-206ENST00000590941 RB1CC1Q8TDY2 1594 aa46.14■■■■■ 4.98
RUNDC3A-206ENST00000590941 SCRIBQ14160 1630 aa46.11■■■■■ 4.97
RUNDC3A-206ENST00000590941 SUPT5HO00267 1087 aaKnown RBP45.79■■■■■ 4.92
RUNDC3A-206ENST00000590941 UNC13AQ9UPW8 1703 aa45.1■■■■■ 4.81
RUNDC3A-206ENST00000590941 RSF1Q96T23 1441 aaPredicted RBP44.98■■■■■ 4.79
RUNDC3A-206ENST00000590941 CECR2Q9BXF3 1484 aa44.72■■■■■ 4.75
RUNDC3A-206ENST00000590941 BAZ1AQ9NRL2 1556 aaPredicted RBP44.66■■■■■ 4.74
RUNDC3A-206ENST00000590941 BICRAQ9NZM4 1560 aa44.59■■■■■ 4.73
RUNDC3A-206ENST00000590941 MROH2BQ7Z745 1585 aa44.58■■■■■ 4.73
RUNDC3A-206ENST00000590941 SMARCA4P51532 1647 aa44.33■■■■■ 4.69
RUNDC3A-206ENST00000590941 WIZO95785 1651 aa44.25■■■■■ 4.67
RUNDC3A-206ENST00000590941 CHIC1Q5VXU3 224 aa44.19■■■■■ 4.67
RUNDC3A-206ENST00000590941 PABPN1Q86U42 306 aaKnown RBP eCLIP44.13■■■■■ 4.66
RUNDC3A-206ENST00000590941 TOP2AP11388 1531 aaKnown RBP43.94■■■■■ 4.63
RUNDC3A-206ENST00000590941 PEG3Q9GZU2 1588 aa43.85■■■■■ 4.61
RUNDC3A-206ENST00000590941 SMARCA2P51531 1590 aa43.54■■■■■ 4.56
RUNDC3A-206ENST00000590941 ATAD2BQ9ULI0 1458 aa43.43■■■■■ 4.54
RUNDC3A-206ENST00000590941 CCDC88BA6NC98 1476 aa43.39■■■■■ 4.54
RUNDC3A-206ENST00000590941 EIF4G1Q04637 1599 aaKnown RBP43.36■■■■■ 4.53
RUNDC3A-206ENST00000590941 BAZ1BQ9UIG0 1483 aaKnown RBP43.26■■■■■ 4.52
RUNDC3A-206ENST00000590941 TRIM41Q8WV44 630 aa43.15■■■■■ 4.5
RUNDC3A-206ENST00000590941 HMGXB3Q12766 1538 aa43.07■■■■■ 4.49
RUNDC3A-206ENST00000590941 NCAPD3P42695 1498 aa43.02■■■■■ 4.48
RUNDC3A-206ENST00000590941 ABCC8Q09428 1581 aa42.59■■■■■ 4.41
RUNDC3A-206ENST00000590941 CC2D2AQ9P2K1 1620 aa42.45■■■■■ 4.39
RUNDC3A-206ENST00000590941 WRNQ14191 1432 aaPredicted RBP eCLIP42.38■■■■■ 4.38
RUNDC3A-206ENST00000590941 LOC105371045A0A1W2PR82 267 aa42.38■■■■■ 4.37
RUNDC3A-206ENST00000590941 EEA1Q15075 1411 aa42.23■■■■■ 4.35
RUNDC3A-206ENST00000590941 CFTRP13569 1480 aa42.2■■■■■ 4.35
RUNDC3A-206ENST00000590941 FAM9AQ8IZU1 332 aaPredicted RBP42.19■■■■■ 4.34
RUNDC3A-206ENST00000590941 PRDM2Q13029 1718 aa42.13■■■■■ 4.34
RUNDC3A-206ENST00000590941 SYNJ1O43426 1573 aa42.12■■■■■ 4.33
RUNDC3A-206ENST00000590941 TOP2BQ02880 1626 aa42.02■■■■■ 4.32
RUNDC3A-206ENST00000590941 BIVM-ERCC5R4GMW8 1640 aa41.99■■■■■ 4.31
RUNDC3A-206ENST00000590941 CADPSQ9ULU8 1353 aa41.92■■■■■ 4.3
RUNDC3A-206ENST00000590941 SOGA1O94964 1423 aa41.9■■■■■ 4.3
RUNDC3A-206ENST00000590941 CSRNP3Q8WYN3 585 aa41.74■■■■■ 4.27
RUNDC3A-206ENST00000590941 CUX1P39880 1505 aa41.68■■■■■ 4.26
RUNDC3A-206ENST00000590941 RUSC2Q8N2Y8 1516 aa41.65■■■■■ 4.26
RUNDC3A-206ENST00000590941 KIF21BO75037 1637 aa41.58■■■■■ 4.25
RUNDC3A-206ENST00000590941 GOLGA3Q08378 1498 aa41.57■■■■■ 4.25
RUNDC3A-206ENST00000590941 CEP164Q9UPV0 1460 aa41.53■■■■■ 4.24
RUNDC3A-206ENST00000590941 LAMC3Q9Y6N6 1575 aa41.53■■■■■ 4.24
RUNDC3A-206ENST00000590941 TNIKQ9UKE5 1360 aa41.52■■■■■ 4.24
RUNDC3A-206ENST00000590941 FANCD2Q9BXW9 1451 aa41.45■■■■■ 4.23
RUNDC3A-206ENST00000590941 EHMT2Q96KQ7 1210 aa41.45■■■■■ 4.23
RUNDC3A-206ENST00000590941 KIF27Q86VH2 1401 aa41.31■■■■■ 4.2
RUNDC3A-206ENST00000590941 CEP162Q5TB80 1403 aa41.28■■■■■ 4.2
RUNDC3A-206ENST00000590941 DNMBPQ6XZF7 1577 aa41.25■■■■■ 4.19
RUNDC3A-206ENST00000590941 ERICH3Q5RHP9 1530 aa41.23■■■■■ 4.19
RUNDC3A-206ENST00000590941 NESP48681 1621 aa41.22■■■■■ 4.19
RUNDC3A-206ENST00000590941 UBTFP17480 764 aaKnown RBP41.21■■■■■ 4.19
RUNDC3A-206ENST00000590941 FGD5Q6ZNL6 1462 aa41.16■■■■■ 4.18
RUNDC3A-206ENST00000590941 PDS5BQ9NTI5 1447 aa41.16■■■■■ 4.18
RUNDC3A-206ENST00000590941 TRIM26Q12899 539 aaPredicted RBP41.13■■■■■ 4.18
RUNDC3A-206ENST00000590941 PRXQ9BXM0 1461 aa41.13■■■■■ 4.17
RUNDC3A-206ENST00000590941 PCGF6Q9BYE7 350 aa41.09■■■■■ 4.17
RUNDC3A-206ENST00000590941 TOPBP1Q92547 1522 aa41.07■■■■■ 4.17
RUNDC3A-206ENST00000590941 RAPGEF2Q9Y4G8 1499 aa41.06■■■■■ 4.16
RUNDC3A-206ENST00000590941 CUX2O14529 1486 aa41.01■■■■■ 4.15
RUNDC3A-206ENST00000590941 POLA1P09884 1462 aaPredicted RBP40.89■■■■■ 4.14
RUNDC3A-206ENST00000590941 ABCA10Q8WWZ4 1543 aa40.89■■■■■ 4.14
RUNDC3A-206ENST00000590941 URB2Q14146 1524 aaKnown RBP40.86■■■■■ 4.13
RUNDC3A-206ENST00000590941 DNAJC5BQ9UF47 199 aa40.85■■■■■ 4.13
RUNDC3A-206ENST00000590941 CLIP1P30622 1438 aa40.85■■■■■ 4.13
RUNDC3A-206ENST00000590941 KIF21AQ7Z4S6 1674 aa40.84■■■■■ 4.13
RUNDC3A-206ENST00000590941 IGF1RP08069 1367 aa40.78■■■■■ 4.12
RUNDC3A-206ENST00000590941 WDR97A6NE52 1622 aa40.7■■■■■ 4.11
RUNDC3A-206ENST00000590941 RAD54L2Q9Y4B4 1467 aa40.66■■■■■ 4.1
RUNDC3A-206ENST00000590941 CARMIL1Q5VZK9 1371 aa40.62■■■■■ 4.09
RUNDC3A-206ENST00000590941 VPS8Q8N3P4 1428 aa40.61■■■■■ 4.09
RUNDC3A-206ENST00000590941 CUL7Q14999 1698 aa40.61■■■■■ 4.09
RUNDC3A-206ENST00000590941 MRC2Q9UBG0 1479 aa40.58■■■■■ 4.09
RUNDC3A-206ENST00000590941 ABCA5Q8WWZ7 1642 aa40.51■■■■■ 4.07
RUNDC3A-206ENST00000590941 HRCP23327 699 aa40.47■■■■■ 4.07
RUNDC3A-206ENST00000590941 TARBP1Q13395 1621 aaKnown RBP40.41■■■■■ 4.06
RUNDC3A-206ENST00000590941 WDR62O43379 1518 aa40.35■■■■■ 4.05
RUNDC3A-206ENST00000590941 GAPVD1Q14C86 1478 aa40.35■■■■■ 4.05
RUNDC3A-206ENST00000590941 ARAP1Q96P48 1450 aa40.35■■■■■ 4.05
RUNDC3A-206ENST00000590941 PPARGC1BQ86YN6 1023 aaKnown RBP40.27■■■■■ 4.04
RUNDC3A-206ENST00000590941 APLP2Q06481 763 aa40.25■■■■■ 4.03
RUNDC3A-206ENST00000590941 ARHGAP35Q9NRY4 1499 aa40.25■■■■■ 4.03
RUNDC3A-206ENST00000590941 TDRD9Q8NDG6 1382 aaKnown RBP40.22■■■■■ 4.03
RUNDC3A-206ENST00000590941 IFT140Q96RY7 1462 aa40.2■■■■■ 4.03
RUNDC3A-206ENST00000590941 RANGAP1P46060 587 aaPredicted RBP40.18■■■■■ 4.02
RUNDC3A-206ENST00000590941 CTTNBP2Q8WZ74 1663 aa40.18■■■■■ 4.02
RUNDC3A-206ENST00000590941 ERCC6Q03468 1493 aa40.18■■■■■ 4.02
RUNDC3A-206ENST00000590941 PBRM1Q86U86 1689 aa40.12■■■■■ 4.01
RUNDC3A-206ENST00000590941 EFCAB5A4FU69 1503 aa40.11■■■■■ 4.01
RUNDC3A-206ENST00000590941 THOC2Q8NI27 1593 aaKnown RBP40.07■■■■■ 4
RUNDC3A-206ENST00000590941 GRIN2BQ13224 1484 aa40■■■■□ 3.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms