Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 MAEA-210ENST00000508634 694 ntTSL 214.03□□□□□ -0.163e-12■■□□□ 14.2
PRPF8Q6P2Q9 AC003006.1-201ENST00000599221 421 ntTSL 312.28□□□□□ -0.443e-6■■□□□ 14.2
PRPF8Q6P2Q9 ZNF551-203ENST00000599402 593 ntTSL 1 (best)11.64□□□□□ -0.553e-6■■□□□ 14.2
PRPF8Q6P2Q9 XRCC3-212ENST00000555231 582 ntTSL 311.6□□□□□ -0.553e-12■■□□□ 14.2
PRPF8Q6P2Q9 ZNF551-202ENST00000596085 469 ntTSL 2 BASIC10.46□□□□□ -0.743e-6■■□□□ 14.2
PRPF8Q6P2Q9 XRCC3-216ENST00000556682 535 ntTSL 49.12□□□□□ -0.953e-12■■□□□ 14.2
PRPF8Q6P2Q9 ZNF551-204ENST00000601064 1826 ntTSL 1 (best)8.56□□□□□ -1.043e-6■■□□□ 14.2
PRPF8Q6P2Q9 ZNF551-201ENST00000282296 4564 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.083e-6■■□□□ 14.2
PRPF8Q6P2Q9 LMO7-226ENST00000534657 589 ntTSL 46.94□□□□□ -1.39e-7■■□□□ 14.2
PRPF8Q6P2Q9 SSR2-214ENST00000526212 351 ntTSL 56.9□□□□□ -1.312e-6■■□□□ 14.2
PRPF8Q6P2Q9 PPP1R7-217ENST00000485630 828 ntTSL 36.79□□□□□ -1.325e-6■■□□□ 14.2
PRPF8Q6P2Q9 LMO7-208ENST00000465309 572 ntTSL 36.24□□□□□ -1.419e-7■■□□□ 14.2
PRPF8Q6P2Q9 ZDHHC20-208ENST00000494731 995 ntTSL 56.04□□□□□ -1.442e-6■■□□□ 14.2
PRPF8Q6P2Q9 ATP2C1-222ENST00000514654 4730 ntTSL 1 (best)5.29□□□□□ -1.561e-7■■□□□ 14.2
PRPF8Q6P2Q9 ATP5A1-204ENST00000586523 4547 nt5.1□□□□□ -1.593e-6■■□□□ 14.2
PRPF8Q6P2Q9 TPD52-221ENST00000522364 716 ntTSL 24.26□□□□□ -1.732e-6■■□□□ 14.2
PRPF8Q6P2Q9 CDC23-204ENST00000471692 1104 ntTSL 54.23□□□□□ -1.731e-6■■□□□ 14.2
PRPF8Q6P2Q9 CPD-209ENST00000584221 680 ntTSL 34.08□□□□□ -1.763e-6■■□□□ 14.2
PRPF8Q6P2Q9 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.18□□□□□ -1.92e-6■■□□□ 14.2
PRPF8Q6P2Q9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.85□□□□□ -1.952e-6■■□□□ 14.2
PRPF8Q6P2Q9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.46□□□□□ -2.023e-6■■□□□ 14.2
PRPF8Q6P2Q9 ATP2C1-206ENST00000504571 786 ntTSL 32.35□□□□□ -2.031e-7■■□□□ 14.2
PRPF8Q6P2Q9 XPO1-207ENST00000436018 318 ntTSL 41.04□□□□□ -2.244e-10■■□□□ 14.2
PRPF8Q6P2Q9 SNX17-206ENST00000484886 568 ntTSL 216.14■□□□□ 0.183e-8■■□□□ 14.2
PRPF8Q6P2Q9 SNX17-207ENST00000489402 743 ntTSL 28.11□□□□□ -1.113e-8■■□□□ 14.2
PRPF8Q6P2Q9 TEAD3-203ENST00000433586 657 ntTSL 58.13□□□□□ -1.114e-7■■□□□ 14.2
PRPF8Q6P2Q9 SGMS1-207ENST00000602619 461 ntTSL 30.84□□□□□ -2.281e-8■■□□□ 14.2
PRPF8Q6P2Q9 NOTUM-203ENST00000477214 813 ntTSL 520.37■□□□□ 0.854e-23■■□□□ 14.2
PRPF8Q6P2Q9 USF2-213ENST00000600341 1392 ntTSL 215□□□□□ -0.015e-8■■□□□ 14.2
PRPF8Q6P2Q9 CTDSPL-202ENST00000310189 1482 ntTSL 59.04□□□□□ -0.968e-8■■□□□ 14.2
PRPF8Q6P2Q9 CTDSPL-207ENST00000447745 793 ntTSL 38.54□□□□□ -1.048e-8■■□□□ 14.2
PRPF8Q6P2Q9 USF2-212ENST00000599625 446 ntTSL 27.97□□□□□ -1.135e-8■■□□□ 14.2
PRPF8Q6P2Q9 CTDSPL-205ENST00000436654 804 ntTSL 37.49□□□□□ -1.218e-8■■□□□ 14.2
PRPF8Q6P2Q9 MAN2C1-236ENST00000567360 457 ntTSL 216.69■□□□□ 0.263e-13■■□□□ 14.2
PRPF8Q6P2Q9 WDFY2-202ENST00000460145 395 ntTSL 57.14□□□□□ -1.278e-7■■□□□ 14.2
PRPF8Q6P2Q9 MLH3-213ENST00000557648 583 ntTSL 35.73□□□□□ -1.491e-7■■□□□ 14.2
PRPF8Q6P2Q9 MLH3-203ENST00000553263 616 ntTSL 23.99□□□□□ -1.771e-7■■□□□ 14.2
PRPF8Q6P2Q9 COBLL1-213ENST00000456693 750 ntTSL 517.54■□□□□ 0.43e-8■■□□□ 14.2
PRPF8Q6P2Q9 COBLL1-206ENST00000434366 519 ntTSL 515.61■□□□□ 0.093e-8■■□□□ 14.2
PRPF8Q6P2Q9 CAPRIN1-217ENST00000534825 668 ntTSL 315.21■□□□□ 0.033e-7■■□□□ 14.2
PRPF8Q6P2Q9 NPRL3-203ENST00000422814 512 ntTSL 414.59□□□□□ -0.071e-11■■□□□ 14.2
PRPF8Q6P2Q9 NPRL3-204ENST00000456528 794 ntTSL 512.52□□□□□ -0.411e-11■■□□□ 14.2
PRPF8Q6P2Q9 NPRL3-207ENST00000468260 922 ntTSL 59.39□□□□□ -0.911e-11■■□□□ 14.2
PRPF8Q6P2Q9 GNAS-256ENST00000603546 573 ntTSL 523.5■■□□□ 1.352e-10■■□□□ 14.2
PRPF8Q6P2Q9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.86□□□□□ -0.032e-6■■□□□ 14.2
PRPF8Q6P2Q9 BMS1P4-201ENST00000441263 1332 ntBASIC9.92□□□□□ -0.822e-6■■□□□ 14.2
PRPF8Q6P2Q9 DDX19A-210ENST00000567012 1178 ntTSL 1 (best)7.8□□□□□ -1.162e-6■■□□□ 14.2
PRPF8Q6P2Q9 CDK5RAP3-223ENST00000582114 647 ntTSL 210.05□□□□□ -0.83e-9■■□□□ 14.2
PRPF8Q6P2Q9 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.86□□□□□ -0.192e-7■■□□□ 14.2
PRPF8Q6P2Q9 COX11-204ENST00000572558 1054 ntTSL 313.31□□□□□ -0.282e-7■■□□□ 14.2
PRPF8Q6P2Q9 COX11-210ENST00000639671 696 ntBASIC13.31□□□□□ -0.282e-7■■□□□ 14.2
PRPF8Q6P2Q9 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.562e-7■■□□□ 14.2
PRPF8Q6P2Q9 COX11-209ENST00000576370 2663 ntTSL 1 (best)8.96□□□□□ -0.982e-7■■□□□ 14.2
PRPF8Q6P2Q9 MAGED1-208ENST00000482599 341 ntTSL 58.75□□□□□ -1.013e-6■■□□□ 14.2
PRPF8Q6P2Q9 DOCK6-207ENST00000587656 4009 ntTSL 59.27□□□□□ -0.928e-7■■□□□ 14.2
PRPF8Q6P2Q9 HM13-220ENST00000492709 1248 ntTSL 513.19□□□□□ -0.35e-9■■□□□ 14.2
PRPF8Q6P2Q9 HM13-213ENST00000469126 756 ntTSL 512.97□□□□□ -0.335e-9■■□□□ 14.2
PRPF8Q6P2Q9 HM13-212ENST00000469097 801 ntTSL 510.15□□□□□ -0.785e-9■■□□□ 14.2
PRPF8Q6P2Q9 RNF10-207ENST00000536869 644 ntTSL 513.79□□□□□ -0.21e-7■■□□□ 14.2
PRPF8Q6P2Q9 RNF10-212ENST00000538796 1206 ntTSL 512.3□□□□□ -0.441e-7■■□□□ 14.2
PRPF8Q6P2Q9 RNF10-225ENST00000551139 583 ntTSL 38.77□□□□□ -1.011e-7■■□□□ 14.2
PRPF8Q6P2Q9 ZMYND8-208ENST00000435836 670 ntTSL 57.29□□□□□ -1.245e-8■■□□□ 14.2
PRPF8Q6P2Q9 ZNF592-201ENST00000299927 7863 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.861e-6■■□□□ 14.2
PRPF8Q6P2Q9 ZNF592-202ENST00000559607 3910 ntTSL 1 (best)8.85□□□□□ -0.991e-6■■□□□ 14.2
PRPF8Q6P2Q9 CDHR2-207ENST00000513031 849 ntTSL 312.95□□□□□ -0.343e-10■■□□□ 14.2
PRPF8Q6P2Q9 AKAP1-214ENST00000575032 570 ntTSL 310.78□□□□□ -0.684e-8■■□□□ 14.2
PRPF8Q6P2Q9 HPS1-209ENST00000470095 801 ntTSL 511.6□□□□□ -0.558e-8■■□□□ 14.2
PRPF8Q6P2Q9 HPS1-211ENST00000478087 971 ntTSL 511.26□□□□□ -0.618e-8■■□□□ 14.2
PRPF8Q6P2Q9 TOM1-212ENST00000456128 1133 ntTSL 513.3□□□□□ -0.281e-6■■□□□ 14.2
PRPF8Q6P2Q9 CARD10-205ENST00000437756 2140 ntTSL 1 (best)15.11■□□□□ 0.011e-6■■□□□ 14.2
PRPF8Q6P2Q9 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC11.51□□□□□ -0.573e-6■■□□□ 14.2
PRPF8Q6P2Q9 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.83e-6■■□□□ 14.2
PRPF8Q6P2Q9 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.983e-6■■□□□ 14.2
PRPF8Q6P2Q9 POT1-206ENST00000446993 806 ntTSL 27.97□□□□□ -1.132e-7■■□□□ 14.2
PRPF8Q6P2Q9 RIOK3-206ENST00000581339 888 ntTSL 25.69□□□□□ -1.53e-6■■□□□ 14.2
PRPF8Q6P2Q9 RIOK3-205ENST00000581302 3049 ntTSL 25.41□□□□□ -1.543e-6■■□□□ 14.2
PRPF8Q6P2Q9 POT1-215ENST00000608261 542 ntTSL 41.19□□□□□ -2.222e-7■■□□□ 14.2
PRPF8Q6P2Q9 RIOK3-209ENST00000584130 591 ntTSL 40.97□□□□□ -2.253e-6■■□□□ 14.2
PRPF8Q6P2Q9 POT1-218ENST00000609702 593 ntTSL 30.76□□□□□ -2.292e-7■■□□□ 14.2
PRPF8Q6P2Q9 POT1-216ENST00000608437 570 ntTSL 4-0.93□□□□□ -2.562e-7■■□□□ 14.2
PRPF8Q6P2Q9 CDK10-214ENST00000512912 658 ntTSL 513.63□□□□□ -0.231e-8■■□□□ 14.2
PRPF8Q6P2Q9 CDK10-213ENST00000511415 707 ntTSL 312.95□□□□□ -0.341e-8■■□□□ 14.2
PRPF8Q6P2Q9 CDK10-203ENST00000378277 576 ntTSL 210.52□□□□□ -0.721e-8■■□□□ 14.2
PRPF8Q6P2Q9 SPNS1-209ENST00000567771 829 ntTSL 321.88■■□□□ 1.091e-7■■□□□ 14.2
PRPF8Q6P2Q9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.041e-9■■□□□ 14.2
PRPF8Q6P2Q9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.111e-9■■□□□ 14.2
PRPF8Q6P2Q9 SLC43A3-218ENST00000530232 389 ntTSL 39.17□□□□□ -0.941e-9■■□□□ 14.2
PRPF8Q6P2Q9 SEMA3F-207ENST00000450338 1693 ntTSL 518.11■□□□□ 0.492e-6■■□□□ 14.2
PRPF8Q6P2Q9 SEMA3F-203ENST00000414301 936 ntTSL 513.72□□□□□ -0.212e-6■■□□□ 14.2
PRPF8Q6P2Q9 SFI1-226ENST00000491973 580 ntTSL 412.58□□□□□ -0.42e-9■■□□□ 14.2
PRPF8Q6P2Q9 AC132008.2-206ENST00000437008 838 ntTSL 220.28■□□□□ 0.841e-11■■□□□ 14.2
PRPF8Q6P2Q9 AC132008.2-202ENST00000414207 1286 ntTSL 517.82■□□□□ 0.441e-11■■□□□ 14.2
PRPF8Q6P2Q9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.31■□□□□ 0.361e-11■■□□□ 14.2
PRPF8Q6P2Q9 AC132008.2-204ENST00000440535 973 ntTSL 1 (best)15.63■□□□□ 0.091e-11■■□□□ 14.2
PRPF8Q6P2Q9 AC132008.2-207ENST00000454517 770 ntBASIC14.83□□□□□ -0.031e-11■■□□□ 14.2
PRPF8Q6P2Q9 AC132008.2-205ENST00000449003 1503 ntTSL 1 (best)11.76□□□□□ -0.531e-11■■□□□ 14.2
PRPF8Q6P2Q9 CPSF1-214ENST00000622776 1029 ntTSL 521■□□□□ 0.952e-6■■□□□ 14.2
PRPF8Q6P2Q9 SLC43A3-209ENST00000528098 1260 ntTSL 212.6□□□□□ -0.392e-7■■□□□ 14.2
PRPF8Q6P2Q9 TTC38-205ENST00000451998 582 ntTSL 213.41□□□□□ -0.262e-23■■□□□ 14.2
PRPF8Q6P2Q9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.115e-7■■□□□ 14.2
Retrieved 100 of 73,762 protein–RNA pairs in 1315 ms