RNA–Protein interactions for RNA: ENST00000310189.3

CTDSPL-202, Transcript of CTD small phosphatase like, humanhuman

TSL 5

Gene CTDSPL, Length 1,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-202ENST00000310189 NISCHQ9Y2I1 1504 aa25.77■■□□□ 1.72
CTDSPL-202ENST00000310189 CCDC180Q9P1Z9 1646 aa22.69■■□□□ 1.22
CTDSPL-202ENST00000310189 ABCC9O60706 1549 aa21.83■■□□□ 1.08
CTDSPL-202ENST00000310189 ZCCHC6Q5VYS8 1495 aaKnown RBP21.57■■□□□ 1.04
CTDSPL-202ENST00000310189 AEBP2Q6ZN18 517 aaPredicted RBP21.45■■□□□ 1.02
CTDSPL-202ENST00000310189 DCAF8L2P0C7V8 631 aa21.43■■□□□ 1.02
CTDSPL-202ENST00000310189 DCAF1Q9Y4B6 1507 aa21.32■■□□□ 1
CTDSPL-202ENST00000310189 NACADO15069 1562 aa21.24■□□□□ 0.99
CTDSPL-202ENST00000310189 MYO15BQ96JP2 1530 aa21.23■□□□□ 0.99
CTDSPL-202ENST00000310189 RB1CC1Q8TDY2 1594 aa21.17■□□□□ 0.98
CTDSPL-202ENST00000310189 SHROOM4Q9ULL8 1493 aa20.85■□□□□ 0.93
CTDSPL-202ENST00000310189 SCRIBQ14160 1630 aa20.79■□□□□ 0.92
CTDSPL-202ENST00000310189 UNC13AQ9UPW8 1703 aa20.63■□□□□ 0.89
CTDSPL-202ENST00000310189 CHIC1Q5VXU3 224 aa20.5■□□□□ 0.87
CTDSPL-202ENST00000310189 PABPN1Q86U42 306 aaKnown RBP eCLIP20.48■□□□□ 0.87
CTDSPL-202ENST00000310189 BICRAQ9NZM4 1560 aa20.47■□□□□ 0.87
CTDSPL-202ENST00000310189 SUPT5HO00267 1087 aaKnown RBP20.12■□□□□ 0.81
CTDSPL-202ENST00000310189 CECR2Q9BXF3 1484 aa20.02■□□□□ 0.8
CTDSPL-202ENST00000310189 BAZ1AQ9NRL2 1556 aaPredicted RBP19.96■□□□□ 0.79
CTDSPL-202ENST00000310189 EIF4G1Q04637 1599 aaKnown RBP19.93■□□□□ 0.78
CTDSPL-202ENST00000310189 SMARCA4P51532 1647 aa19.9■□□□□ 0.78
CTDSPL-202ENST00000310189 MROH2BQ7Z745 1585 aa19.87■□□□□ 0.77
CTDSPL-202ENST00000310189 RSF1Q96T23 1441 aaPredicted RBP19.83■□□□□ 0.77
CTDSPL-202ENST00000310189 CC2D2AQ9P2K1 1620 aa19.73■□□□□ 0.75
CTDSPL-202ENST00000310189 SMARCA2P51531 1590 aa19.69■□□□□ 0.74
CTDSPL-202ENST00000310189 ATAD2BQ9ULI0 1458 aa19.69■□□□□ 0.74
CTDSPL-202ENST00000310189 WIZO95785 1651 aa19.68■□□□□ 0.74
CTDSPL-202ENST00000310189 PEG3Q9GZU2 1588 aa19.67■□□□□ 0.74
CTDSPL-202ENST00000310189 NCAPD3P42695 1498 aa19.59■□□□□ 0.73
CTDSPL-202ENST00000310189 BAZ1BQ9UIG0 1483 aaKnown RBP19.58■□□□□ 0.72
CTDSPL-202ENST00000310189 DNAJC5BQ9UF47 199 aa19.57■□□□□ 0.72
CTDSPL-202ENST00000310189 HMGXB3Q12766 1538 aa19.54■□□□□ 0.72
CTDSPL-202ENST00000310189 TOP2AP11388 1531 aaKnown RBP19.51■□□□□ 0.71
CTDSPL-202ENST00000310189 CCDC88BA6NC98 1476 aa19.28■□□□□ 0.68
CTDSPL-202ENST00000310189 CADPSQ9ULU8 1353 aa19.06■□□□□ 0.64
CTDSPL-202ENST00000310189 CFTRP13569 1480 aa19.04■□□□□ 0.64
CTDSPL-202ENST00000310189 LAMC3Q9Y6N6 1575 aa19.01■□□□□ 0.63
CTDSPL-202ENST00000310189 NESP48681 1621 aa19■□□□□ 0.63
CTDSPL-202ENST00000310189 TRIM41Q8WV44 630 aa18.98■□□□□ 0.63
CTDSPL-202ENST00000310189 PDS5BQ9NTI5 1447 aa18.89■□□□□ 0.62
CTDSPL-202ENST00000310189 PRDM2Q13029 1718 aa18.89■□□□□ 0.61
CTDSPL-202ENST00000310189 FANCD2Q9BXW9 1451 aa18.86■□□□□ 0.61
CTDSPL-202ENST00000310189 ERCC6Q03468 1493 aa18.81■□□□□ 0.6
CTDSPL-202ENST00000310189 CEP164Q9UPV0 1460 aa18.81■□□□□ 0.6
CTDSPL-202ENST00000310189 KIF21AQ7Z4S6 1674 aa18.77■□□□□ 0.59
CTDSPL-202ENST00000310189 ABCC8Q09428 1581 aa18.76■□□□□ 0.59
CTDSPL-202ENST00000310189 WRNQ14191 1432 aaPredicted RBP eCLIP18.73■□□□□ 0.59
CTDSPL-202ENST00000310189 MRC2Q9UBG0 1479 aa18.67■□□□□ 0.58
CTDSPL-202ENST00000310189 CUX1P39880 1505 aa18.62■□□□□ 0.57
CTDSPL-202ENST00000310189 URB2Q14146 1524 aaKnown RBP18.62■□□□□ 0.57
CTDSPL-202ENST00000310189 DNMBPQ6XZF7 1577 aa18.61■□□□□ 0.57
CTDSPL-202ENST00000310189 SYNJ1O43426 1573 aa18.61■□□□□ 0.57
CTDSPL-202ENST00000310189 THOC2Q8NI27 1593 aaKnown RBP18.6■□□□□ 0.57
CTDSPL-202ENST00000310189 TOPBP1Q92547 1522 aa18.6■□□□□ 0.57
CTDSPL-202ENST00000310189 TOP2BQ02880 1626 aa18.58■□□□□ 0.56
CTDSPL-202ENST00000310189 WDR62O43379 1518 aa18.57■□□□□ 0.56
CTDSPL-202ENST00000310189 FAM9AQ8IZU1 332 aaPredicted RBP18.57■□□□□ 0.56
CTDSPL-202ENST00000310189 BIVM-ERCC5R4GMW8 1640 aa18.56■□□□□ 0.56
CTDSPL-202ENST00000310189 EEA1Q15075 1411 aa18.53■□□□□ 0.56
CTDSPL-202ENST00000310189 FGD5Q6ZNL6 1462 aa18.5■□□□□ 0.55
CTDSPL-202ENST00000310189 POLA1P09884 1462 aaPredicted RBP18.47■□□□□ 0.55
CTDSPL-202ENST00000310189 LOC105371045A0A1W2PR82 267 aa18.42■□□□□ 0.54
CTDSPL-202ENST00000310189 SOGA1O94964 1423 aa18.42■□□□□ 0.54
CTDSPL-202ENST00000310189 RAD54L2Q9Y4B4 1467 aa18.4■□□□□ 0.54
CTDSPL-202ENST00000310189 CUX2O14529 1486 aa18.39■□□□□ 0.53
CTDSPL-202ENST00000310189 CSRNP3Q8WYN3 585 aa18.39■□□□□ 0.53
CTDSPL-202ENST00000310189 IFT140Q96RY7 1462 aa18.37■□□□□ 0.53
CTDSPL-202ENST00000310189 TARBP1Q13395 1621 aaKnown RBP18.33■□□□□ 0.53
CTDSPL-202ENST00000310189 ABCA10Q8WWZ4 1543 aa18.33■□□□□ 0.52
CTDSPL-202ENST00000310189 KIF27Q86VH2 1401 aa18.31■□□□□ 0.52
CTDSPL-202ENST00000310189 RUSC2Q8N2Y8 1516 aa18.29■□□□□ 0.52
CTDSPL-202ENST00000310189 WDR97A6NE52 1622 aa18.29■□□□□ 0.52
CTDSPL-202ENST00000310189 EHMT2Q96KQ7 1210 aa18.27■□□□□ 0.52
CTDSPL-202ENST00000310189 TDRD9Q8NDG6 1382 aaKnown RBP18.26■□□□□ 0.51
CTDSPL-202ENST00000310189 ZNF608Q9ULD9 1512 aaPredicted RBP18.25■□□□□ 0.51
CTDSPL-202ENST00000310189 GOLGA3Q08378 1498 aa18.22■□□□□ 0.51
CTDSPL-202ENST00000310189 UBTFP17480 764 aaKnown RBP18.21■□□□□ 0.51
CTDSPL-202ENST00000310189 ABCA5Q8WWZ7 1642 aa18.21■□□□□ 0.51
CTDSPL-202ENST00000310189 AQRO60306 1485 aaKnown RBP eCLIP18.21■□□□□ 0.512e-9■■■■■ 31.6
CTDSPL-202ENST00000310189 GAPVD1Q14C86 1478 aa18.21■□□□□ 0.51
CTDSPL-202ENST00000310189 KIF21BO75037 1637 aa18.2■□□□□ 0.5
CTDSPL-202ENST00000310189 EIF4G3O43432 1585 aaKnown RBP18.2■□□□□ 0.5
CTDSPL-202ENST00000310189 SENP3Q9H4L4 574 aaPredicted RBP18.15■□□□□ 0.5
CTDSPL-202ENST00000310189 TNIKQ9UKE5 1360 aa18.15■□□□□ 0.5
CTDSPL-202ENST00000310189 GRIN2BQ13224 1484 aa18.14■□□□□ 0.49
CTDSPL-202ENST00000310189 ERICH3Q5RHP9 1530 aa18.12■□□□□ 0.49
CTDSPL-202ENST00000310189 PBRM1Q86U86 1689 aa18.11■□□□□ 0.49
CTDSPL-202ENST00000310189 IGF1RP08069 1367 aa18.11■□□□□ 0.49
CTDSPL-202ENST00000310189 SNAPC4Q5SXM2 1469 aa18.07■□□□□ 0.48
CTDSPL-202ENST00000310189 PRXQ9BXM0 1461 aa18.07■□□□□ 0.48
CTDSPL-202ENST00000310189 PHF23Q9BUL5 403 aaPredicted RBP18.07■□□□□ 0.48
CTDSPL-202ENST00000310189 MAGI1Q96QZ7 1491 aaPredicted RBP18.04■□□□□ 0.48
CTDSPL-202ENST00000310189 RAPGEF2Q9Y4G8 1499 aa18.04■□□□□ 0.48
CTDSPL-202ENST00000310189 CUL7Q14999 1698 aa18.04■□□□□ 0.48
CTDSPL-202ENST00000310189 CARMIL1Q5VZK9 1371 aa18.03■□□□□ 0.48
CTDSPL-202ENST00000310189 ADAMTS12P58397 1594 aa18.02■□□□□ 0.48
CTDSPL-202ENST00000310189 FHAD1B1AJZ9 1412 aa18.01■□□□□ 0.47
CTDSPL-202ENST00000310189 CEP162Q5TB80 1403 aa18.01■□□□□ 0.47
CTDSPL-202ENST00000310189 SYNJ2O15056 1496 aa17.97■□□□□ 0.47
CTDSPL-202ENST00000310189 FBLN2P98095 1184 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms