RNA–Protein interactions for RNA: ENST00000447745.5

CTDSPL-207, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-207ENST00000447745 NISCHQ9Y2I1 1504 aa24.6■■□□□ 1.53
CTDSPL-207ENST00000447745 CCDC180Q9P1Z9 1646 aa21.83■■□□□ 1.08
CTDSPL-207ENST00000447745 ABCC9O60706 1549 aa21.5■■□□□ 1.03
CTDSPL-207ENST00000447745 DCAF8L2P0C7V8 631 aa20.69■□□□□ 0.9
CTDSPL-207ENST00000447745 RB1CC1Q8TDY2 1594 aa20.61■□□□□ 0.89
CTDSPL-207ENST00000447745 NACADO15069 1562 aa20.58■□□□□ 0.88
CTDSPL-207ENST00000447745 ZCCHC6Q5VYS8 1495 aaKnown RBP20.44■□□□□ 0.86
CTDSPL-207ENST00000447745 MYO15BQ96JP2 1530 aa20.42■□□□□ 0.86
CTDSPL-207ENST00000447745 DCAF1Q9Y4B6 1507 aa20.32■□□□□ 0.84
CTDSPL-207ENST00000447745 PABPN1Q86U42 306 aaKnown RBP eCLIP20.14■□□□□ 0.81
CTDSPL-207ENST00000447745 UNC13AQ9UPW8 1703 aa20.12■□□□□ 0.81
CTDSPL-207ENST00000447745 BICRAQ9NZM4 1560 aa20■□□□□ 0.79
CTDSPL-207ENST00000447745 SCRIBQ14160 1630 aa19.96■□□□□ 0.79
CTDSPL-207ENST00000447745 DNAJC5BQ9UF47 199 aa19.85■□□□□ 0.77
CTDSPL-207ENST00000447745 SHROOM4Q9ULL8 1493 aa19.73■□□□□ 0.75
CTDSPL-207ENST00000447745 EIF4G1Q04637 1599 aaKnown RBP19.47■□□□□ 0.71
CTDSPL-207ENST00000447745 CC2D2AQ9P2K1 1620 aa19.41■□□□□ 0.7
CTDSPL-207ENST00000447745 CECR2Q9BXF3 1484 aa19.31■□□□□ 0.68
CTDSPL-207ENST00000447745 SMARCA4P51532 1647 aa19.07■□□□□ 0.64
CTDSPL-207ENST00000447745 BAZ1AQ9NRL2 1556 aaPredicted RBP19.05■□□□□ 0.64
CTDSPL-207ENST00000447745 NCAPD3P42695 1498 aa19.02■□□□□ 0.63
CTDSPL-207ENST00000447745 ATAD2BQ9ULI0 1458 aa19.02■□□□□ 0.63
CTDSPL-207ENST00000447745 SMARCA2P51531 1590 aa18.96■□□□□ 0.63
CTDSPL-207ENST00000447745 MROH2BQ7Z745 1585 aa18.96■□□□□ 0.63
CTDSPL-207ENST00000447745 HMGXB3Q12766 1538 aa18.87■□□□□ 0.61
CTDSPL-207ENST00000447745 PEG3Q9GZU2 1588 aa18.87■□□□□ 0.61
CTDSPL-207ENST00000447745 BAZ1BQ9UIG0 1483 aaKnown RBP18.84■□□□□ 0.61
CTDSPL-207ENST00000447745 WIZO95785 1651 aa18.75■□□□□ 0.59
CTDSPL-207ENST00000447745 RSF1Q96T23 1441 aaPredicted RBP18.74■□□□□ 0.59
CTDSPL-207ENST00000447745 NESP48681 1621 aa18.59■□□□□ 0.57
CTDSPL-207ENST00000447745 TOP2AP11388 1531 aaKnown RBP18.52■□□□□ 0.56
CTDSPL-207ENST00000447745 ERCC6Q03468 1493 aa18.52■□□□□ 0.55
CTDSPL-207ENST00000447745 LAMC3Q9Y6N6 1575 aa18.49■□□□□ 0.55
CTDSPL-207ENST00000447745 CADPSQ9ULU8 1353 aa18.48■□□□□ 0.55
CTDSPL-207ENST00000447745 PDS5BQ9NTI5 1447 aa18.41■□□□□ 0.54
CTDSPL-207ENST00000447745 CCDC88BA6NC98 1476 aa18.36■□□□□ 0.53
CTDSPL-207ENST00000447745 CFTRP13569 1480 aa18.33■□□□□ 0.53
CTDSPL-207ENST00000447745 KIF21AQ7Z4S6 1674 aa18.32■□□□□ 0.52
CTDSPL-207ENST00000447745 CUX2O14529 1486 aa18.32■□□□□ 0.52
CTDSPL-207ENST00000447745 SUPT5HO00267 1087 aaKnown RBP18.3■□□□□ 0.52
CTDSPL-207ENST00000447745 THOC2Q8NI27 1593 aaKnown RBP18.25■□□□□ 0.51
CTDSPL-207ENST00000447745 FANCD2Q9BXW9 1451 aa18.24■□□□□ 0.51
CTDSPL-207ENST00000447745 CEP164Q9UPV0 1460 aa18.21■□□□□ 0.51
CTDSPL-207ENST00000447745 MRC2Q9UBG0 1479 aa18.2■□□□□ 0.5
CTDSPL-207ENST00000447745 AEBP2Q6ZN18 517 aaPredicted RBP18.12■□□□□ 0.49
CTDSPL-207ENST00000447745 WDR62O43379 1518 aa18.12■□□□□ 0.49
CTDSPL-207ENST00000447745 PRDM2Q13029 1718 aa18.11■□□□□ 0.49
CTDSPL-207ENST00000447745 URB2Q14146 1524 aaKnown RBP18.07■□□□□ 0.48
CTDSPL-207ENST00000447745 ABCC8Q09428 1581 aa17.94■□□□□ 0.46
CTDSPL-207ENST00000447745 TOPBP1Q92547 1522 aa17.93■□□□□ 0.46
CTDSPL-207ENST00000447745 DNAJC5Q9H3Z4 198 aa17.91■□□□□ 0.46
CTDSPL-207ENST00000447745 DNMBPQ6XZF7 1577 aa17.89■□□□□ 0.45
CTDSPL-207ENST00000447745 IFT140Q96RY7 1462 aa17.84■□□□□ 0.45
CTDSPL-207ENST00000447745 CUX1P39880 1505 aa17.79■□□□□ 0.44
CTDSPL-207ENST00000447745 ZNF608Q9ULD9 1512 aaPredicted RBP17.78■□□□□ 0.44
CTDSPL-207ENST00000447745 POLA1P09884 1462 aaPredicted RBP17.78■□□□□ 0.44
CTDSPL-207ENST00000447745 SOGA1O94964 1423 aa17.75■□□□□ 0.43
CTDSPL-207ENST00000447745 FGD5Q6ZNL6 1462 aa17.74■□□□□ 0.43
CTDSPL-207ENST00000447745 RAD54L2Q9Y4B4 1467 aa17.74■□□□□ 0.43
CTDSPL-207ENST00000447745 TARBP1Q13395 1621 aaKnown RBP17.73■□□□□ 0.43
CTDSPL-207ENST00000447745 AQRO60306 1485 aaKnown RBP eCLIP17.69■□□□□ 0.422e-9■■■■■ 31.6
CTDSPL-207ENST00000447745 TDRD9Q8NDG6 1382 aaKnown RBP17.66■□□□□ 0.42
CTDSPL-207ENST00000447745 WRNQ14191 1432 aaPredicted RBP eCLIP17.66■□□□□ 0.42
CTDSPL-207ENST00000447745 EIF4G3O43432 1585 aaKnown RBP17.66■□□□□ 0.42
CTDSPL-207ENST00000447745 OSCARQ8IYS5 282 aa17.64■□□□□ 0.41
CTDSPL-207ENST00000447745 SYNJ1O43426 1573 aa17.6■□□□□ 0.41
CTDSPL-207ENST00000447745 TOP2BQ02880 1626 aa17.6■□□□□ 0.41
CTDSPL-207ENST00000447745 BIVM-ERCC5R4GMW8 1640 aa17.58■□□□□ 0.41
CTDSPL-207ENST00000447745 WDR97A6NE52 1622 aa17.55■□□□□ 0.4
CTDSPL-207ENST00000447745 ABCA10Q8WWZ4 1543 aa17.55■□□□□ 0.4
CTDSPL-207ENST00000447745 FBLN2P98095 1184 aa17.54■□□□□ 0.4
CTDSPL-207ENST00000447745 GAPVD1Q14C86 1478 aa17.52■□□□□ 0.4
CTDSPL-207ENST00000447745 GRIN2BQ13224 1484 aa17.51■□□□□ 0.39
CTDSPL-207ENST00000447745 SNAPC4Q5SXM2 1469 aa17.5■□□□□ 0.39
CTDSPL-207ENST00000447745 CHMP7Q8WUX9 453 aaPredicted RBP17.47■□□□□ 0.39
CTDSPL-207ENST00000447745 MAGI1Q96QZ7 1491 aaPredicted RBP17.46■□□□□ 0.39
CTDSPL-207ENST00000447745 CHD1O14646 1710 aa17.45■□□□□ 0.38
CTDSPL-207ENST00000447745 ABCA5Q8WWZ7 1642 aa17.45■□□□□ 0.38
CTDSPL-207ENST00000447745 PBRM1Q86U86 1689 aa17.42■□□□□ 0.38
CTDSPL-207ENST00000447745 SYNJ2O15056 1496 aa17.4■□□□□ 0.38
CTDSPL-207ENST00000447745 ERICH3Q5RHP9 1530 aa17.33■□□□□ 0.37
CTDSPL-207ENST00000447745 FHAD1B1AJZ9 1412 aa17.31■□□□□ 0.36
CTDSPL-207ENST00000447745 TRIM41Q8WV44 630 aa17.31■□□□□ 0.36
CTDSPL-207ENST00000447745 KIF27Q86VH2 1401 aa17.3■□□□□ 0.36
CTDSPL-207ENST00000447745 ADAMTS12P58397 1594 aa17.29■□□□□ 0.36
CTDSPL-207ENST00000447745 RIMBP3CA6NJZ7 1639 aa17.29■□□□□ 0.36
CTDSPL-207ENST00000447745 RIMBP3BA6NNM3 1639 aa17.29■□□□□ 0.36
CTDSPL-207ENST00000447745 RIMBP3Q9UFD9 1639 aa17.29■□□□□ 0.36
CTDSPL-207ENST00000447745 GRIN2AQ12879 1464 aa17.28■□□□□ 0.36
CTDSPL-207ENST00000447745 IGF1RP08069 1367 aa17.28■□□□□ 0.36
CTDSPL-207ENST00000447745 ARHGEF11O15085 1522 aa17.27■□□□□ 0.36
CTDSPL-207ENST00000447745 CLASP1Q7Z460 1538 aa17.26■□□□□ 0.35
CTDSPL-207ENST00000447745 CYB5RLQ6IPT4 315 aa17.21■□□□□ 0.35
CTDSPL-207ENST00000447745 NUP160Q12769 1436 aa17.21■□□□□ 0.34
CTDSPL-207ENST00000447745 CEP170Q5SW79 1584 aa17.19■□□□□ 0.34
CTDSPL-207ENST00000447745 CARMIL1Q5VZK9 1371 aa17.16■□□□□ 0.34
CTDSPL-207ENST00000447745 RUSC2Q8N2Y8 1516 aa17.16■□□□□ 0.34
CTDSPL-207ENST00000447745 CUL7Q14999 1698 aa17.14■□□□□ 0.33
CTDSPL-207ENST00000447745 ARAP1Q96P48 1450 aa17.14■□□□□ 0.33
CTDSPL-207ENST00000447745 JPH4Q96JJ6 628 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms