RNA–Protein interactions for RNA: ENST00000534657.5

LMO7-226, Transcript of LIM domain 7, humanhuman

TSL 4

Gene LMO7, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-226ENST00000534657 AEBP2Q6ZN18 517 aaPredicted RBP23.22■■□□□ 1.31
LMO7-226ENST00000534657 CHIC1Q5VXU3 224 aa22.39■■□□□ 1.17
LMO7-226ENST00000534657 NISCHQ9Y2I1 1504 aa19.75■□□□□ 0.75
LMO7-226ENST00000534657 SENP3Q9H4L4 574 aaPredicted RBP19.7■□□□□ 0.74
LMO7-226ENST00000534657 PHF23Q9BUL5 403 aaPredicted RBP19.69■□□□□ 0.74
LMO7-226ENST00000534657 FOXD1Q16676 465 aa18.36■□□□□ 0.53
LMO7-226ENST00000534657 PLPPR3Q6T4P5 718 aa18.06■□□□□ 0.48
LMO7-226ENST00000534657 PPP6R1Q9UPN7 881 aa17.49■□□□□ 0.39
LMO7-226ENST00000534657 ADRA2BP18089 450 aa17.47■□□□□ 0.39
LMO7-226ENST00000534657 PIAS4Q8N2W9 510 aaPredicted RBP17.25■□□□□ 0.35
LMO7-226ENST00000534657 CCDC180Q9P1Z9 1646 aa17.18■□□□□ 0.34
LMO7-226ENST00000534657 MSH5O43196 834 aa16.99■□□□□ 0.31
LMO7-226ENST00000534657 ZCCHC6Q5VYS8 1495 aaKnown RBP16.69■□□□□ 0.26
LMO7-226ENST00000534657 DCAF1Q9Y4B6 1507 aa16.47■□□□□ 0.23
LMO7-226ENST00000534657 MYO15BQ96JP2 1530 aa16.19■□□□□ 0.18
LMO7-226ENST00000534657 SHROOM4Q9ULL8 1493 aa15.99■□□□□ 0.15
LMO7-226ENST00000534657 POTEDQ86YR6 584 aa15.97■□□□□ 0.15
LMO7-226ENST00000534657 MAPK8IP2Q13387 824 aaPredicted RBP15.95■□□□□ 0.14
LMO7-226ENST00000534657 SCAF1Q9H7N4 1312 aaKnown RBP15.94■□□□□ 0.14
LMO7-226ENST00000534657 PPP4R3CPQ6ZMV5 832 aa15.91■□□□□ 0.14
LMO7-226ENST00000534657 NACADO15069 1562 aa15.89■□□□□ 0.13
LMO7-226ENST00000534657 DCAF8L2P0C7V8 631 aa15.81■□□□□ 0.12
LMO7-226ENST00000534657 ABCC9O60706 1549 aa15.74■□□□□ 0.11
LMO7-226ENST00000534657 DMRT2Q9Y5R5 561 aa15.68■□□□□ 0.1
LMO7-226ENST00000534657 SCRIBQ14160 1630 aa15.64■□□□□ 0.09
LMO7-226ENST00000534657 RB1CC1Q8TDY2 1594 aa15.63■□□□□ 0.09
LMO7-226ENST00000534657 SUPT5HO00267 1087 aaKnown RBP15.51■□□□□ 0.07
LMO7-226ENST00000534657 CNKSR2Q8WXI2 1034 aa15.49■□□□□ 0.07
LMO7-226ENST00000534657 NCBP3Q53F19 620 aaKnown RBP15.4■□□□□ 0.06
LMO7-226ENST00000534657 RSF1Q96T23 1441 aaPredicted RBP15.39■□□□□ 0.05
LMO7-226ENST00000534657 UNC13AQ9UPW8 1703 aa15.35■□□□□ 0.05
LMO7-226ENST00000534657 KCNA4P22459 653 aa15.26■□□□□ 0.03
LMO7-226ENST00000534657 HOXD11P31277 338 aaPredicted RBP15.25■□□□□ 0.03
LMO7-226ENST00000534657 RNF216Q9NWF9 866 aaPredicted RBP15.25■□□□□ 0.03
LMO7-226ENST00000534657 CECR2Q9BXF3 1484 aa15.24■□□□□ 0.03
LMO7-226ENST00000534657 BAZ1AQ9NRL2 1556 aaPredicted RBP15.23■□□□□ 0.03
LMO7-226ENST00000534657 MROH2BQ7Z745 1585 aa15.22■□□□□ 0.03
LMO7-226ENST00000534657 BICRAQ9NZM4 1560 aa15.2■□□□□ 0.02
LMO7-226ENST00000534657 NPM3O75607 178 aaKnown RBP15.18■□□□□ 0.02
LMO7-226ENST00000534657 DCAF8L1A6NGE4 600 aa15.12■□□□□ 0.01
LMO7-226ENST00000534657 SMARCA4P51532 1647 aa15.12■□□□□ 0.01
LMO7-226ENST00000534657 WIZO95785 1651 aa15.08■□□□□ 0
LMO7-226ENST00000534657 PEG3Q9GZU2 1588 aa15.03■□□□□ -0
LMO7-226ENST00000534657 TOP2AP11388 1531 aaKnown RBP15.02■□□□□ -0
LMO7-226ENST00000534657 EIF4G1Q04637 1599 aaKnown RBP14.96□□□□□ -0.01
LMO7-226ENST00000534657 SMARCA2P51531 1590 aa14.87□□□□□ -0.03
LMO7-226ENST00000534657 PABPN1Q86U42 306 aaKnown RBP eCLIP14.82□□□□□ -0.04
LMO7-226ENST00000534657 CCDC88BA6NC98 1476 aa14.8□□□□□ -0.04
LMO7-226ENST00000534657 ATAD2BQ9ULI0 1458 aa14.79□□□□□ -0.04
LMO7-226ENST00000534657 HMGXB3Q12766 1538 aa14.69□□□□□ -0.06
LMO7-226ENST00000534657 DNAJC5BQ9UF47 199 aa14.67□□□□□ -0.06
LMO7-226ENST00000534657 NCAPD3P42695 1498 aa14.66□□□□□ -0.06
LMO7-226ENST00000534657 BAZ1BQ9UIG0 1483 aaKnown RBP14.66□□□□□ -0.06
LMO7-226ENST00000534657 TRIM41Q8WV44 630 aa14.64□□□□□ -0.07
LMO7-226ENST00000534657 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.6□□□□□ -0.071e-8■□□□□ 11.3
LMO7-226ENST00000534657 RNF39Q9H2S5 420 aa14.54□□□□□ -0.08
LMO7-226ENST00000534657 ABCC8Q09428 1581 aa14.51□□□□□ -0.09
LMO7-226ENST00000534657 SLC4A1APQ9BWU0 796 aaKnown RBP14.48□□□□□ -0.09
LMO7-226ENST00000534657 EEA1Q15075 1411 aa14.48□□□□□ -0.09
LMO7-226ENST00000534657 LOC105371045A0A1W2PR82 267 aa14.46□□□□□ -0.09
LMO7-226ENST00000534657 WRNQ14191 1432 aaPredicted RBP eCLIP14.44□□□□□ -0.1
LMO7-226ENST00000534657 SLC4A2P04920 1241 aa14.41□□□□□ -0.1
LMO7-226ENST00000534657 CACNB1Q02641 598 aaPredicted RBP14.41□□□□□ -0.1
LMO7-226ENST00000534657 SYNJ1O43426 1573 aa14.39□□□□□ -0.11
LMO7-226ENST00000534657 CFTRP13569 1480 aa14.39□□□□□ -0.11
LMO7-226ENST00000534657 PRDM2Q13029 1718 aa14.39□□□□□ -0.11
LMO7-226ENST00000534657 BIVM-ERCC5R4GMW8 1640 aa14.38□□□□□ -0.11
LMO7-226ENST00000534657 TOP2BQ02880 1626 aa14.37□□□□□ -0.11
LMO7-226ENST00000534657 CC2D2AQ9P2K1 1620 aa14.35□□□□□ -0.11
LMO7-226ENST00000534657 C1QBPQ07021 282 aaKnown RBP14.34□□□□□ -0.11
LMO7-226ENST00000534657 U3KPZ7 1027 aaPredicted RBP14.3□□□□□ -0.12
LMO7-226ENST00000534657 SOGA1O94964 1423 aa14.3□□□□□ -0.12
LMO7-226ENST00000534657 KIF21BO75037 1637 aa14.27□□□□□ -0.12
LMO7-226ENST00000534657 FAM9AQ8IZU1 332 aaPredicted RBP14.25□□□□□ -0.13
LMO7-226ENST00000534657 TNIKQ9UKE5 1360 aa14.24□□□□□ -0.13
LMO7-226ENST00000534657 CADPSQ9ULU8 1353 aa14.23□□□□□ -0.13
LMO7-226ENST00000534657 CUX1P39880 1505 aa14.23□□□□□ -0.13
LMO7-226ENST00000534657 RUSC2Q8N2Y8 1516 aa14.23□□□□□ -0.13
LMO7-226ENST00000534657 CSRNP3Q8WYN3 585 aa14.22□□□□□ -0.13
LMO7-226ENST00000534657 GOLGA3Q08378 1498 aa14.21□□□□□ -0.13
LMO7-226ENST00000534657 CEP164Q9UPV0 1460 aa14.2□□□□□ -0.14
LMO7-226ENST00000534657 ERICH3Q5RHP9 1530 aa14.14□□□□□ -0.15
LMO7-226ENST00000534657 CEP162Q5TB80 1403 aa14.13□□□□□ -0.15
LMO7-226ENST00000534657 TRIM26Q12899 539 aaPredicted RBP14.12□□□□□ -0.15
LMO7-226ENST00000534657 PRXQ9BXM0 1461 aa14.11□□□□□ -0.15
LMO7-226ENST00000534657 LAMC3Q9Y6N6 1575 aa14.1□□□□□ -0.15
LMO7-226ENST00000534657 FOXD4L1Q9NU39 408 aa14.08□□□□□ -0.16
LMO7-226ENST00000534657 PCGF6Q9BYE7 350 aa14.06□□□□□ -0.16
LMO7-226ENST00000534657 KIF27Q86VH2 1401 aa14.06□□□□□ -0.16
LMO7-226ENST00000534657 FANCD2Q9BXW9 1451 aa14.06□□□□□ -0.16
LMO7-226ENST00000534657 DNMBPQ6XZF7 1577 aa14.05□□□□□ -0.16
LMO7-226ENST00000534657 RAPGEF2Q9Y4G8 1499 aa14.03□□□□□ -0.16
LMO7-226ENST00000534657 ZBTB22O15209 634 aa14.02□□□□□ -0.17
LMO7-226ENST00000534657 HRCP23327 699 aa14.02□□□□□ -0.17
LMO7-226ENST00000534657 MYCNP04198 464 aaPredicted RBP14.01□□□□□ -0.17
LMO7-226ENST00000534657 SPINK5Q9NQ38 1064 aaPredicted RBP14.01□□□□□ -0.17
LMO7-226ENST00000534657 FGD5Q6ZNL6 1462 aa13.99□□□□□ -0.17
LMO7-226ENST00000534657 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.99□□□□□ -0.17
LMO7-226ENST00000534657 HNRNPUL2Q1KMD3 747 aaKnown RBP13.99□□□□□ -0.17
LMO7-226ENST00000534657 CAPN15O75808 1086 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 205.2 ms