RNA–Protein interactions for RNA: ENST00000572558.5

COX11-204, Transcript of cytochrome c oxidase copper chaperone COX11, humanhuman

TSL 3

Gene COX11, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX11-204ENST00000572558 NISCHQ9Y2I1 1504 aa38.22■■■■□ 3.71
COX11-204ENST00000572558 ABCC9O60706 1549 aa34.42■■■■□ 3.1
COX11-204ENST00000572558 CCDC180Q9P1Z9 1646 aa34.33■■■■□ 3.09
COX11-204ENST00000572558 RB1CC1Q8TDY2 1594 aa32.73■■■□□ 2.83
COX11-204ENST00000572558 NACADO15069 1562 aa32.49■■■□□ 2.79
COX11-204ENST00000572558 DNAJC5BQ9UF47 199 aa32.39■■■□□ 2.78
COX11-204ENST00000572558 DCAF8L2P0C7V8 631 aa32.29■■■□□ 2.76
COX11-204ENST00000572558 PABPN1Q86U42 306 aaKnown RBP eCLIP32.04■■■□□ 2.72
COX11-204ENST00000572558 MYO15BQ96JP2 1530 aa32.03■■■□□ 2.72
COX11-204ENST00000572558 UNC13AQ9UPW8 1703 aa31.96■■■□□ 2.71
COX11-204ENST00000572558 BICRAQ9NZM4 1560 aa31.78■■■□□ 2.68
COX11-204ENST00000572558 ZCCHC6Q5VYS8 1495 aaKnown RBP31.65■■■□□ 2.66
COX11-204ENST00000572558 DCAF1Q9Y4B6 1507 aa31.58■■■□□ 2.65
COX11-204ENST00000572558 SHROOM4Q9ULL8 1493 aa31.37■■■□□ 2.61
COX11-204ENST00000572558 SCRIBQ14160 1630 aa31.25■■■□□ 2.59
COX11-204ENST00000572558 CC2D2AQ9P2K1 1620 aa31.09■■■□□ 2.57
COX11-204ENST00000572558 CECR2Q9BXF3 1484 aa31.03■■■□□ 2.56
COX11-204ENST00000572558 EIF4G1Q04637 1599 aaKnown RBP31■■■□□ 2.55
COX11-204ENST00000572558 NCAPD3P42695 1498 aa30.01■■■□□ 2.4
COX11-204ENST00000572558 ATAD2BQ9ULI0 1458 aa29.89■■■□□ 2.38
COX11-204ENST00000572558 DNAJC5Q9H3Z4 198 aa29.83■■■□□ 2.37
COX11-204ENST00000572558 SMARCA4P51532 1647 aa29.82■■■□□ 2.36
COX11-204ENST00000572558 SMARCA2P51531 1590 aa29.8■■■□□ 2.36
COX11-204ENST00000572558 HMGXB3Q12766 1538 aa29.76■■■□□ 2.36
COX11-204ENST00000572558 CUX2O14529 1486 aa29.73■■■□□ 2.35
COX11-204ENST00000572558 ERCC6Q03468 1493 aa29.73■■■□□ 2.35
COX11-204ENST00000572558 BAZ1AQ9NRL2 1556 aaPredicted RBP29.67■■■□□ 2.34
COX11-204ENST00000572558 BAZ1BQ9UIG0 1483 aaKnown RBP29.59■■■□□ 2.33
COX11-204ENST00000572558 PEG3Q9GZU2 1588 aa29.55■■■□□ 2.32
COX11-204ENST00000572558 NESP48681 1621 aa29.54■■■□□ 2.32
COX11-204ENST00000572558 MROH2BQ7Z745 1585 aa29.44■■■□□ 2.3
COX11-204ENST00000572558 LAMC3Q9Y6N6 1575 aa29.33■■■□□ 2.29
COX11-204ENST00000572558 THOC2Q8NI27 1593 aaKnown RBP29.26■■■□□ 2.27
COX11-204ENST00000572558 PDS5BQ9NTI5 1447 aa29.18■■■□□ 2.26
COX11-204ENST00000572558 KIF21AQ7Z4S6 1674 aa29.14■■■□□ 2.26
COX11-204ENST00000572558 CADPSQ9ULU8 1353 aa29.09■■■□□ 2.25
COX11-204ENST00000572558 WIZO95785 1651 aa29.06■■■□□ 2.24
COX11-204ENST00000572558 MRC2Q9UBG0 1479 aa28.92■■■□□ 2.22
COX11-204ENST00000572558 WDR62O43379 1518 aa28.85■■■□□ 2.21
COX11-204ENST00000572558 RSF1Q96T23 1441 aaPredicted RBP28.81■■■□□ 2.2
COX11-204ENST00000572558 CEP164Q9UPV0 1460 aa28.78■■■□□ 2.2
COX11-204ENST00000572558 FANCD2Q9BXW9 1451 aa28.74■■■□□ 2.19
COX11-204ENST00000572558 CFTRP13569 1480 aa28.73■■■□□ 2.19
COX11-204ENST00000572558 TOP2AP11388 1531 aaKnown RBP28.71■■■□□ 2.19
COX11-204ENST00000572558 URB2Q14146 1524 aaKnown RBP28.51■■■□□ 2.15
COX11-204ENST00000572558 TRIM41Q8WV44 630 aa28.46■■■□□ 2.15
COX11-204ENST00000572558 PRDM2Q13029 1718 aa28.4■■■□□ 2.14
COX11-204ENST00000572558 CCDC88BA6NC98 1476 aa28.4■■■□□ 2.14
COX11-204ENST00000572558 OSCARQ8IYS5 282 aa28.36■■■□□ 2.13
COX11-204ENST00000572558 IFT140Q96RY7 1462 aa28.22■■■□□ 2.11
COX11-204ENST00000572558 TOPBP1Q92547 1522 aa28.19■■■□□ 2.1
COX11-204ENST00000572558 ZNF608Q9ULD9 1512 aaPredicted RBP28.18■■■□□ 2.1
COX11-204ENST00000572558 ABCC8Q09428 1581 aa28.15■■■□□ 2.1
COX11-204ENST00000572558 DNMBPQ6XZF7 1577 aa28.07■■■□□ 2.08
COX11-204ENST00000572558 EIF4G3O43432 1585 aaKnown RBP28■■■□□ 2.07
COX11-204ENST00000572558 RIMBP3CA6NJZ7 1639 aa27.97■■■□□ 2.07
COX11-204ENST00000572558 RIMBP3BA6NNM3 1639 aa27.97■■■□□ 2.07
COX11-204ENST00000572558 RIMBP3Q9UFD9 1639 aa27.97■■■□□ 2.07
COX11-204ENST00000572558 TARBP1Q13395 1621 aaKnown RBP27.95■■■□□ 2.06
COX11-204ENST00000572558 AQRO60306 1485 aaKnown RBP eCLIP27.92■■■□□ 2.067e-6■■□□□ 13.1
COX11-204ENST00000572558 POLA1P09884 1462 aaPredicted RBP27.89■■■□□ 2.06
COX11-204ENST00000572558 ARHGEF11O15085 1522 aa27.88■■■□□ 2.05
COX11-204ENST00000572558 CHD1O14646 1710 aa27.8■■■□□ 2.04
COX11-204ENST00000572558 RAD54L2Q9Y4B4 1467 aa27.79■■■□□ 2.04
COX11-204ENST00000572558 SOGA1O94964 1423 aa27.77■■■□□ 2.04
COX11-204ENST00000572558 FBLN2P98095 1184 aa27.75■■■□□ 2.03
COX11-204ENST00000572558 TDRD9Q8NDG6 1382 aaKnown RBP27.73■■■□□ 2.03
COX11-204ENST00000572558 FGD5Q6ZNL6 1462 aa27.7■■■□□ 2.03
COX11-204ENST00000572558 CYB5RLQ6IPT4 315 aa27.7■■■□□ 2.02
COX11-204ENST00000572558 WDR97A6NE52 1622 aa27.67■■■□□ 2.02
COX11-204ENST00000572558 CUX1P39880 1505 aa27.67■■■□□ 2.02
COX11-204ENST00000572558 SNAPC4Q5SXM2 1469 aa27.63■■■□□ 2.01
COX11-204ENST00000572558 ARAP1Q96P48 1450 aa27.6■■■□□ 2.01
COX11-204ENST00000572558 MAGI1Q96QZ7 1491 aaPredicted RBP27.56■■■□□ 2
COX11-204ENST00000572558 GRIN2BQ13224 1484 aa27.55■■■□□ 2
COX11-204ENST00000572558 CHMP7Q8WUX9 453 aaPredicted RBP27.54■■■□□ 2
COX11-204ENST00000572558 CLASP1Q7Z460 1538 aa27.51■■□□□ 1.99
COX11-204ENST00000572558 SYNJ1O43426 1573 aa27.48■■□□□ 1.99
COX11-204ENST00000572558 SYNJ2O15056 1496 aa27.46■■□□□ 1.99
COX11-204ENST00000572558 SUPT5HO00267 1087 aaKnown RBP27.44■■□□□ 1.98
COX11-204ENST00000572558 GAPVD1Q14C86 1478 aa27.44■■□□□ 1.98
COX11-204ENST00000572558 TRHP20396 242 aaPredicted RBP27.41■■□□□ 1.98
COX11-204ENST00000572558 ABCA10Q8WWZ4 1543 aa27.4■■□□□ 1.98
COX11-204ENST00000572558 PBRM1Q86U86 1689 aa27.4■■□□□ 1.98
COX11-204ENST00000572558 ABCA5Q8WWZ7 1642 aa27.35■■□□□ 1.97
COX11-204ENST00000572558 WRNQ14191 1432 aaPredicted RBP eCLIP27.27■■□□□ 1.96
COX11-204ENST00000572558 TOP2BQ02880 1626 aa27.19■■□□□ 1.94
COX11-204ENST00000572558 BIVM-ERCC5R4GMW8 1640 aa27.19■■□□□ 1.94
COX11-204ENST00000572558 GRIN2AQ12879 1464 aa27.19■■□□□ 1.94
COX11-204ENST00000572558 ADAMTS12P58397 1594 aa27.15■■□□□ 1.94
COX11-204ENST00000572558 NUP160Q12769 1436 aa27.11■■□□□ 1.93
COX11-204ENST00000572558 FHAD1B1AJZ9 1412 aa27.08■■□□□ 1.93
COX11-204ENST00000572558 CEP170Q5SW79 1584 aa27.08■■□□□ 1.93
COX11-204ENST00000572558 ERCC6L2Q5T890 1561 aa27.06■■□□□ 1.92
COX11-204ENST00000572558 ERICH3Q5RHP9 1530 aa27.05■■□□□ 1.92
COX11-204ENST00000572558 SHROOM2Q13796 1616 aa26.98■■□□□ 1.91
COX11-204ENST00000572558 PRG4Q92954 1404 aaPredicted RBP26.84■■□□□ 1.89
COX11-204ENST00000572558 JPH4Q96JJ6 628 aa26.84■■□□□ 1.89
COX11-204ENST00000572558 RUSC2Q8N2Y8 1516 aa26.77■■□□□ 1.88
COX11-204ENST00000572558 IGF1RP08069 1367 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms