RNA–Protein interactions for RNA: ENST00000581585.5

RIOK3-207, Transcript of RIO kinase 3, humanhuman

TSL 2 BASIC

Gene RIOK3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-207ENST00000581585 NISCHQ9Y2I1 1504 aa32.89■■■□□ 2.86
RIOK3-207ENST00000581585 CCDC180Q9P1Z9 1646 aa28.86■■■□□ 2.21
RIOK3-207ENST00000581585 ZCCHC6Q5VYS8 1495 aaKnown RBP27.65■■■□□ 2.02
RIOK3-207ENST00000581585 ABCC9O60706 1549 aa27.26■■□□□ 1.95
RIOK3-207ENST00000581585 DCAF1Q9Y4B6 1507 aa27.22■■□□□ 1.95
RIOK3-207ENST00000581585 DCAF8L2P0C7V8 631 aa26.98■■□□□ 1.91
RIOK3-207ENST00000581585 MYO15BQ96JP2 1530 aa26.94■■□□□ 1.9
RIOK3-207ENST00000581585 NACADO15069 1562 aa26.81■■□□□ 1.88
RIOK3-207ENST00000581585 SHROOM4Q9ULL8 1493 aa26.65■■□□□ 1.86
RIOK3-207ENST00000581585 RB1CC1Q8TDY2 1594 aa26.61■■□□□ 1.85
RIOK3-207ENST00000581585 SCRIBQ14160 1630 aa26.46■■□□□ 1.83
RIOK3-207ENST00000581585 UNC13AQ9UPW8 1703 aa26.26■■□□□ 1.79
RIOK3-207ENST00000581585 BICRAQ9NZM4 1560 aa25.88■■□□□ 1.73
RIOK3-207ENST00000581585 PABPN1Q86U42 306 aaKnown RBP eCLIP25.59■■□□□ 1.69
RIOK3-207ENST00000581585 CECR2Q9BXF3 1484 aa25.56■■□□□ 1.68
RIOK3-207ENST00000581585 SUPT5HO00267 1087 aaKnown RBP25.49■■□□□ 1.67
RIOK3-207ENST00000581585 RSF1Q96T23 1441 aaPredicted RBP25.43■■□□□ 1.66
RIOK3-207ENST00000581585 MROH2BQ7Z745 1585 aa25.42■■□□□ 1.66
RIOK3-207ENST00000581585 BAZ1AQ9NRL2 1556 aaPredicted RBP25.41■■□□□ 1.66
RIOK3-207ENST00000581585 SMARCA4P51532 1647 aa25.37■■□□□ 1.65
RIOK3-207ENST00000581585 WIZO95785 1651 aa25.26■■□□□ 1.63
RIOK3-207ENST00000581585 PEG3Q9GZU2 1588 aa25.07■■□□□ 1.6
RIOK3-207ENST00000581585 EIF4G1Q04637 1599 aaKnown RBP25.06■■□□□ 1.6
RIOK3-207ENST00000581585 TOP2AP11388 1531 aaKnown RBP24.96■■□□□ 1.59
RIOK3-207ENST00000581585 SMARCA2P51531 1590 aa24.91■■□□□ 1.58
RIOK3-207ENST00000581585 ATAD2BQ9ULI0 1458 aa24.91■■□□□ 1.58
RIOK3-207ENST00000581585 BAZ1BQ9UIG0 1483 aaKnown RBP24.75■■□□□ 1.55
RIOK3-207ENST00000581585 CC2D2AQ9P2K1 1620 aa24.73■■□□□ 1.55
RIOK3-207ENST00000581585 HMGXB3Q12766 1538 aa24.73■■□□□ 1.55
RIOK3-207ENST00000581585 NCAPD3P42695 1498 aa24.7■■□□□ 1.54
RIOK3-207ENST00000581585 CCDC88BA6NC98 1476 aa24.64■■□□□ 1.54
RIOK3-207ENST00000581585 CHIC1Q5VXU3 224 aa24.39■■□□□ 1.49
RIOK3-207ENST00000581585 PRDM2Q13029 1718 aa24.21■■□□□ 1.47
RIOK3-207ENST00000581585 ABCC8Q09428 1581 aa24.14■■□□□ 1.46
RIOK3-207ENST00000581585 CFTRP13569 1480 aa24.13■■□□□ 1.45
RIOK3-207ENST00000581585 DNAJC5BQ9UF47 199 aa24.1■■□□□ 1.45
RIOK3-207ENST00000581585 CADPSQ9ULU8 1353 aa24.02■■□□□ 1.44
RIOK3-207ENST00000581585 TRIM41Q8WV44 630 aa23.97■■□□□ 1.43
RIOK3-207ENST00000581585 SYNJ1O43426 1573 aa23.94■■□□□ 1.42
RIOK3-207ENST00000581585 LAMC3Q9Y6N6 1575 aa23.94■■□□□ 1.42
RIOK3-207ENST00000581585 NESP48681 1621 aa23.93■■□□□ 1.42
RIOK3-207ENST00000581585 WRNQ14191 1432 aaPredicted RBP eCLIP23.92■■□□□ 1.42
RIOK3-207ENST00000581585 BIVM-ERCC5R4GMW8 1640 aa23.87■■□□□ 1.41
RIOK3-207ENST00000581585 TOP2BQ02880 1626 aa23.84■■□□□ 1.41
RIOK3-207ENST00000581585 FANCD2Q9BXW9 1451 aa23.79■■□□□ 1.4
RIOK3-207ENST00000581585 CUX1P39880 1505 aa23.79■■□□□ 1.4
RIOK3-207ENST00000581585 KIF21AQ7Z4S6 1674 aa23.75■■□□□ 1.39
RIOK3-207ENST00000581585 CEP164Q9UPV0 1460 aa23.67■■□□□ 1.38
RIOK3-207ENST00000581585 PDS5BQ9NTI5 1447 aa23.65■■□□□ 1.38
RIOK3-207ENST00000581585 DNMBPQ6XZF7 1577 aa23.62■■□□□ 1.37
RIOK3-207ENST00000581585 SOGA1O94964 1423 aa23.58■■□□□ 1.37
RIOK3-207ENST00000581585 URB2Q14146 1524 aaKnown RBP23.55■■□□□ 1.36
RIOK3-207ENST00000581585 TOPBP1Q92547 1522 aa23.55■■□□□ 1.36
RIOK3-207ENST00000581585 RUSC2Q8N2Y8 1516 aa23.54■■□□□ 1.36
RIOK3-207ENST00000581585 FAM9AQ8IZU1 332 aaPredicted RBP23.54■■□□□ 1.36
RIOK3-207ENST00000581585 FGD5Q6ZNL6 1462 aa23.52■■□□□ 1.36
RIOK3-207ENST00000581585 EEA1Q15075 1411 aa23.5■■□□□ 1.35
RIOK3-207ENST00000581585 POLA1P09884 1462 aaPredicted RBP23.43■■□□□ 1.34
RIOK3-207ENST00000581585 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
RIOK3-207ENST00000581585 LOC105371045A0A1W2PR82 267 aa23.42■■□□□ 1.34
RIOK3-207ENST00000581585 WDR97A6NE52 1622 aa23.4■■□□□ 1.34
RIOK3-207ENST00000581585 THOC2Q8NI27 1593 aaKnown RBP23.38■■□□□ 1.33
RIOK3-207ENST00000581585 WDR62O43379 1518 aa23.36■■□□□ 1.33
RIOK3-207ENST00000581585 ERCC6Q03468 1493 aa23.34■■□□□ 1.33
RIOK3-207ENST00000581585 RAD54L2Q9Y4B4 1467 aa23.33■■□□□ 1.33
RIOK3-207ENST00000581585 KIF21BO75037 1637 aa23.32■■□□□ 1.32
RIOK3-207ENST00000581585 CSRNP3Q8WYN3 585 aa23.31■■□□□ 1.32
RIOK3-207ENST00000581585 KIF27Q86VH2 1401 aa23.31■■□□□ 1.32
RIOK3-207ENST00000581585 ABCA10Q8WWZ4 1543 aa23.31■■□□□ 1.32
RIOK3-207ENST00000581585 CUX2O14529 1486 aa23.3■■□□□ 1.32
RIOK3-207ENST00000581585 TARBP1Q13395 1621 aaKnown RBP23.28■■□□□ 1.32
RIOK3-207ENST00000581585 ABCA5Q8WWZ7 1642 aa23.21■■□□□ 1.31
RIOK3-207ENST00000581585 EHMT2Q96KQ7 1210 aa23.2■■□□□ 1.3
RIOK3-207ENST00000581585 GOLGA3Q08378 1498 aa23.19■■□□□ 1.3
RIOK3-207ENST00000581585 PRXQ9BXM0 1461 aa23.17■■□□□ 1.3
RIOK3-207ENST00000581585 ERICH3Q5RHP9 1530 aa23.15■■□□□ 1.3
RIOK3-207ENST00000581585 RAPGEF2Q9Y4G8 1499 aa23.14■■□□□ 1.29
RIOK3-207ENST00000581585 PBRM1Q86U86 1689 aa23.1■■□□□ 1.29
RIOK3-207ENST00000581585 IGF1RP08069 1367 aa23.1■■□□□ 1.29
RIOK3-207ENST00000581585 IFT140Q96RY7 1462 aa23.1■■□□□ 1.29
RIOK3-207ENST00000581585 CUL7Q14999 1698 aa23.08■■□□□ 1.28
RIOK3-207ENST00000581585 TNIKQ9UKE5 1360 aa23.06■■□□□ 1.28
RIOK3-207ENST00000581585 GAPVD1Q14C86 1478 aa23.06■■□□□ 1.28
RIOK3-207ENST00000581585 TDRD9Q8NDG6 1382 aaKnown RBP23.05■■□□□ 1.28
RIOK3-207ENST00000581585 ZNF608Q9ULD9 1512 aaPredicted RBP23■■□□□ 1.27
RIOK3-207ENST00000581585 EIF4G3O43432 1585 aaKnown RBP23■■□□□ 1.27
RIOK3-207ENST00000581585 CARMIL1Q5VZK9 1371 aa22.98■■□□□ 1.27
RIOK3-207ENST00000581585 UBTFP17480 764 aaKnown RBP22.96■■□□□ 1.27
RIOK3-207ENST00000581585 AQRO60306 1485 aaKnown RBP eCLIP22.96■■□□□ 1.274e-6■■□□□ 12.2
RIOK3-207ENST00000581585 CEP162Q5TB80 1403 aa22.95■■□□□ 1.27
RIOK3-207ENST00000581585 ADAMTS12P58397 1594 aa22.91■■□□□ 1.26
RIOK3-207ENST00000581585 GRIN2BQ13224 1484 aa22.89■■□□□ 1.25
RIOK3-207ENST00000581585 CTTNBP2Q8WZ74 1663 aa22.87■■□□□ 1.25
RIOK3-207ENST00000581585 FHAD1B1AJZ9 1412 aa22.79■■□□□ 1.24
RIOK3-207ENST00000581585 CLIP1P30622 1438 aa22.79■■□□□ 1.24
RIOK3-207ENST00000581585 SNAPC4Q5SXM2 1469 aa22.79■■□□□ 1.24
RIOK3-207ENST00000581585 MAGI1Q96QZ7 1491 aaPredicted RBP22.73■■□□□ 1.23
RIOK3-207ENST00000581585 ARAP1Q96P48 1450 aa22.67■■□□□ 1.22
RIOK3-207ENST00000581585 ARHGAP35Q9NRY4 1499 aa22.66■■□□□ 1.22
RIOK3-207ENST00000581585 SYNJ2O15056 1496 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms