RNA–Protein interactions for RNA: ENST00000581302.5

RIOK3-205, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 3,049 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-205ENST00000581302 NISCHQ9Y2I1 1504 aa16.32■□□□□ 0.2
RIOK3-205ENST00000581302 CCDC180Q9P1Z9 1646 aa15.03■□□□□ -0
RIOK3-205ENST00000581302 MYO15BQ96JP2 1530 aa14.21□□□□□ -0.13
RIOK3-205ENST00000581302 DCAF1Q9Y4B6 1507 aa14.16□□□□□ -0.14
RIOK3-205ENST00000581302 CHIC1Q5VXU3 224 aa14.12□□□□□ -0.15
RIOK3-205ENST00000581302 AEBP2Q6ZN18 517 aaPredicted RBP14.1□□□□□ -0.15
RIOK3-205ENST00000581302 ZCCHC6Q5VYS8 1495 aaKnown RBP13.82□□□□□ -0.2
RIOK3-205ENST00000581302 NACADO15069 1562 aa13.71□□□□□ -0.21
RIOK3-205ENST00000581302 PELP1Q8IZL8 1130 aaKnown RBP13.71□□□□□ -0.21
RIOK3-205ENST00000581302 SHROOM4Q9ULL8 1493 aa13.63□□□□□ -0.23
RIOK3-205ENST00000581302 MYT1Q01538 1121 aa13.56□□□□□ -0.24
RIOK3-205ENST00000581302 RB1CC1Q8TDY2 1594 aa13.47□□□□□ -0.25
RIOK3-205ENST00000581302 UNC13AQ9UPW8 1703 aa13.39□□□□□ -0.27
RIOK3-205ENST00000581302 TTBK1Q5TCY1 1321 aaPredicted RBP13.15□□□□□ -0.3
RIOK3-205ENST00000581302 PRKCSHP14314 528 aaPredicted RBP13.13□□□□□ -0.31
RIOK3-205ENST00000581302 BICRAQ9NZM4 1560 aa13.09□□□□□ -0.31
RIOK3-205ENST00000581302 SLC24A1O60721 1099 aa13.05□□□□□ -0.32
RIOK3-205ENST00000581302 PEG3Q9GZU2 1588 aa13□□□□□ -0.33
RIOK3-205ENST00000581302 ABCC9O60706 1549 aa12.98□□□□□ -0.33
RIOK3-205ENST00000581302 SMARCA2P51531 1590 aa12.81□□□□□ -0.36
RIOK3-205ENST00000581302 APLP2Q06481 763 aa12.8□□□□□ -0.36
RIOK3-205ENST00000581302 SCRIBQ14160 1630 aa12.74□□□□□ -0.37
RIOK3-205ENST00000581302 ERICH6Q7L0X2 663 aa12.7□□□□□ -0.38
RIOK3-205ENST00000581302 BAZ1AQ9NRL2 1556 aaPredicted RBP12.69□□□□□ -0.38
RIOK3-205ENST00000581302 HMGXB3Q12766 1538 aa12.69□□□□□ -0.38
RIOK3-205ENST00000581302 SMARCA4P51532 1647 aa12.68□□□□□ -0.38
RIOK3-205ENST00000581302 PHF23Q9BUL5 403 aaPredicted RBP12.67□□□□□ -0.38
RIOK3-205ENST00000581302 PRDM2Q13029 1718 aa12.65□□□□□ -0.38
RIOK3-205ENST00000581302 DCAF8L2P0C7V8 631 aa12.63□□□□□ -0.39
RIOK3-205ENST00000581302 SUPT5HO00267 1087 aaKnown RBP12.57□□□□□ -0.4
RIOK3-205ENST00000581302 BCL11AQ9H165 835 aa12.54□□□□□ -0.4
RIOK3-205ENST00000581302 EIF4G1Q04637 1599 aaKnown RBP12.54□□□□□ -0.4
RIOK3-205ENST00000581302 NCAPD3P42695 1498 aa12.46□□□□□ -0.41
RIOK3-205ENST00000581302 TOP2AP11388 1531 aaKnown RBP12.46□□□□□ -0.42
RIOK3-205ENST00000581302 FAM9AQ8IZU1 332 aaPredicted RBP12.41□□□□□ -0.42
RIOK3-205ENST00000581302 DAXXQ9UER7 740 aaPredicted RBP12.37□□□□□ -0.43
RIOK3-205ENST00000581302 SCAF1Q9H7N4 1312 aaKnown RBP12.35□□□□□ -0.43
RIOK3-205ENST00000581302 MROH2BQ7Z745 1585 aa12.32□□□□□ -0.44
RIOK3-205ENST00000581302 CC2D2AQ9P2K1 1620 aa12.32□□□□□ -0.44
RIOK3-205ENST00000581302 ATAD2BQ9ULI0 1458 aa12.3□□□□□ -0.44
RIOK3-205ENST00000581302 HRCP23327 699 aa12.3□□□□□ -0.44
RIOK3-205ENST00000581302 RSF1Q96T23 1441 aaPredicted RBP12.28□□□□□ -0.44
RIOK3-205ENST00000581302 WDR97A6NE52 1622 aa12.24□□□□□ -0.45
RIOK3-205ENST00000581302 WIZO95785 1651 aa12.24□□□□□ -0.45
RIOK3-205ENST00000581302 LAMC3Q9Y6N6 1575 aa12.21□□□□□ -0.46
RIOK3-205ENST00000581302 CECR2Q9BXF3 1484 aa12.21□□□□□ -0.46
RIOK3-205ENST00000581302 BIVM-ERCC5R4GMW8 1640 aa12.1□□□□□ -0.47
RIOK3-205ENST00000581302 BAZ1BQ9UIG0 1483 aaKnown RBP12.08□□□□□ -0.48
RIOK3-205ENST00000581302 PABPN1Q86U42 306 aaKnown RBP eCLIP12.05□□□□□ -0.48
RIOK3-205ENST00000581302 EIF5BO60841 1220 aaKnown RBP12.04□□□□□ -0.48
RIOK3-205ENST00000581302 CFTRP13569 1480 aa12.03□□□□□ -0.48
RIOK3-205ENST00000581302 PPARGC1BQ86YN6 1023 aaKnown RBP11.97□□□□□ -0.49
RIOK3-205ENST00000581302 THOC2Q8NI27 1593 aaKnown RBP11.95□□□□□ -0.5
RIOK3-205ENST00000581302 ABCC8Q09428 1581 aa11.93□□□□□ -0.5
RIOK3-205ENST00000581302 LOC105371045A0A1W2PR82 267 aa11.92□□□□□ -0.5
RIOK3-205ENST00000581302 CCDC88BA6NC98 1476 aa11.92□□□□□ -0.5
RIOK3-205ENST00000581302 WDR62O43379 1518 aa11.91□□□□□ -0.5
RIOK3-205ENST00000581302 CENPBP07199 599 aaPredicted RBP11.89□□□□□ -0.51
RIOK3-205ENST00000581302 TOP2BQ02880 1626 aa11.89□□□□□ -0.51
RIOK3-205ENST00000581302 PLEKHG5O94827 1062 aa11.89□□□□□ -0.51
RIOK3-205ENST00000581302 DNMBPQ6XZF7 1577 aa11.85□□□□□ -0.51
RIOK3-205ENST00000581302 KIF21AQ7Z4S6 1674 aa11.85□□□□□ -0.51
RIOK3-205ENST00000581302 PCGF6Q9BYE7 350 aa11.79□□□□□ -0.52
RIOK3-205ENST00000581302 CADPSQ9ULU8 1353 aa11.77□□□□□ -0.52
RIOK3-205ENST00000581302 TARBP1Q13395 1621 aaKnown RBP11.75□□□□□ -0.53
RIOK3-205ENST00000581302 ABCA5Q8WWZ7 1642 aa11.74□□□□□ -0.53
RIOK3-205ENST00000581302 CUX2O14529 1486 aa11.73□□□□□ -0.53
RIOK3-205ENST00000581302 PLPPR3Q6T4P5 718 aa11.7□□□□□ -0.54
RIOK3-205ENST00000581302 MRC2Q9UBG0 1479 aa11.69□□□□□ -0.54
RIOK3-205ENST00000581302 ANP32EQ9BTT0 268 aa11.68□□□□□ -0.54
RIOK3-205ENST00000581302 PDS5BQ9NTI5 1447 aa11.68□□□□□ -0.54
RIOK3-205ENST00000581302 EHMT2Q96KQ7 1210 aa11.68□□□□□ -0.54
RIOK3-205ENST00000581302 CUL7Q14999 1698 aa11.67□□□□□ -0.54
RIOK3-205ENST00000581302 UBE2Q2Q8WVN8 375 aa11.67□□□□□ -0.54
RIOK3-205ENST00000581302 DNAJC5BQ9UF47 199 aa11.64□□□□□ -0.55
RIOK3-205ENST00000581302 PBRM1Q86U86 1689 aa11.64□□□□□ -0.55
RIOK3-205ENST00000581302 CUX1P39880 1505 aa11.64□□□□□ -0.55
RIOK3-205ENST00000581302 CEP164Q9UPV0 1460 aa11.63□□□□□ -0.55
RIOK3-205ENST00000581302 ACIN1Q9UKV3 1341 aaKnown RBP11.63□□□□□ -0.55
RIOK3-205ENST00000581302 ABCA10Q8WWZ4 1543 aa11.63□□□□□ -0.55
RIOK3-205ENST00000581302 SYNJ1O43426 1573 aa11.63□□□□□ -0.55
RIOK3-205ENST00000581302 ANO8Q9HCE9 1232 aaPredicted RBP11.62□□□□□ -0.55
RIOK3-205ENST00000581302 EEA1Q15075 1411 aa11.62□□□□□ -0.55
RIOK3-205ENST00000581302 FANCD2Q9BXW9 1451 aa11.62□□□□□ -0.55
RIOK3-205ENST00000581302 CSRNP3Q8WYN3 585 aa11.61□□□□□ -0.55
RIOK3-205ENST00000581302 KIF21BO75037 1637 aa11.6□□□□□ -0.55
RIOK3-205ENST00000581302 ERICH3Q5RHP9 1530 aa11.6□□□□□ -0.55
RIOK3-205ENST00000581302 TOPBP1Q92547 1522 aa11.6□□□□□ -0.55
RIOK3-205ENST00000581302 TRIM41Q8WV44 630 aa11.6□□□□□ -0.55
RIOK3-205ENST00000581302 SENP3Q9H4L4 574 aaPredicted RBP11.59□□□□□ -0.55
RIOK3-205ENST00000581302 URB2Q14146 1524 aaKnown RBP11.58□□□□□ -0.56
RIOK3-205ENST00000581302 GTF3C3Q9Y5Q9 886 aa11.58□□□□□ -0.56
RIOK3-205ENST00000581302 PODXL2Q9NZ53 605 aa11.58□□□□□ -0.56
RIOK3-205ENST00000581302 IFT140Q96RY7 1462 aa11.55□□□□□ -0.56
RIOK3-205ENST00000581302 NEUROD1Q13562 356 aa11.54□□□□□ -0.56
RIOK3-205ENST00000581302 NCBP3Q53F19 620 aaKnown RBP11.49□□□□□ -0.57
RIOK3-205ENST00000581302 SHROOM2Q13796 1616 aa11.49□□□□□ -0.57
RIOK3-205ENST00000581302 ADAMTS12P58397 1594 aa11.48□□□□□ -0.57
RIOK3-205ENST00000581302 CTTNBP2Q8WZ74 1663 aa11.48□□□□□ -0.57
RIOK3-205ENST00000581302 WRNQ14191 1432 aaPredicted RBP eCLIP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms