RNA–Protein interactions for RNA: ENST00000600341.5

USF2-213, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 2

Gene USF2, Length 1,392 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-213ENST00000600341 NISCHQ9Y2I1 1504 aa43.48■■■■■ 4.55
USF2-213ENST00000600341 CCDC180Q9P1Z9 1646 aa38.51■■■■□ 3.76
USF2-213ENST00000600341 ABCC9O60706 1549 aa37.54■■■■□ 3.6
USF2-213ENST00000600341 ZCCHC6Q5VYS8 1495 aaKnown RBP36.29■■■■□ 3.4
USF2-213ENST00000600341 DCAF8L2P0C7V8 631 aa36.21■■■■□ 3.39
USF2-213ENST00000600341 NACADO15069 1562 aa36.14■■■■□ 3.38
USF2-213ENST00000600341 RB1CC1Q8TDY2 1594 aa36.14■■■■□ 3.38
USF2-213ENST00000600341 MYO15BQ96JP2 1530 aa35.99■■■■□ 3.35
USF2-213ENST00000600341 DCAF1Q9Y4B6 1507 aa35.94■■■■□ 3.34
USF2-213ENST00000600341 UNC13AQ9UPW8 1703 aa35.37■■■■□ 3.25
USF2-213ENST00000600341 SCRIBQ14160 1630 aa35.24■■■■□ 3.23
USF2-213ENST00000600341 PABPN1Q86U42 306 aaKnown RBP eCLIP35.13■■■■□ 3.218e-7■□□□□ 11.1
USF2-213ENST00000600341 BICRAQ9NZM4 1560 aa35.12■■■■□ 3.21
USF2-213ENST00000600341 SHROOM4Q9ULL8 1493 aa34.65■■■■□ 3.14
USF2-213ENST00000600341 DNAJC5BQ9UF47 199 aa34.28■■■■□ 3.08
USF2-213ENST00000600341 EIF4G1Q04637 1599 aaKnown RBP34.13■■■■□ 3.05
USF2-213ENST00000600341 CC2D2AQ9P2K1 1620 aa33.94■■■■□ 3.02
USF2-213ENST00000600341 CECR2Q9BXF3 1484 aa33.91■■■■□ 3.02
USF2-213ENST00000600341 SMARCA4P51532 1647 aa33.69■■■□□ 2.98
USF2-213ENST00000600341 BAZ1AQ9NRL2 1556 aaPredicted RBP33.65■■■□□ 2.98
USF2-213ENST00000600341 MROH2BQ7Z745 1585 aa33.55■■■□□ 2.96
USF2-213ENST00000600341 ATAD2BQ9ULI0 1458 aa33.46■■■□□ 2.95
USF2-213ENST00000600341 SMARCA2P51531 1590 aa33.37■■■□□ 2.93
USF2-213ENST00000600341 NCAPD3P42695 1498 aa33.37■■■□□ 2.93
USF2-213ENST00000600341 PEG3Q9GZU2 1588 aa33.34■■■□□ 2.93
USF2-213ENST00000600341 RSF1Q96T23 1441 aaPredicted RBP33.23■■■□□ 2.91
USF2-213ENST00000600341 HMGXB3Q12766 1538 aa33.23■■■□□ 2.91
USF2-213ENST00000600341 WIZO95785 1651 aa33.19■■■□□ 2.9
USF2-213ENST00000600341 BAZ1BQ9UIG0 1483 aaKnown RBP33.18■■■□□ 2.9
USF2-213ENST00000600341 TOP2AP11388 1531 aaKnown RBP32.83■■■□□ 2.85
USF2-213ENST00000600341 NESP48681 1621 aa32.57■■■□□ 2.8
USF2-213ENST00000600341 SUPT5HO00267 1087 aaKnown RBP32.56■■■□□ 2.8
USF2-213ENST00000600341 CCDC88BA6NC98 1476 aa32.45■■■□□ 2.79
USF2-213ENST00000600341 LAMC3Q9Y6N6 1575 aa32.44■■■□□ 2.78
USF2-213ENST00000600341 CADPSQ9ULU8 1353 aa32.42■■■□□ 2.78
USF2-213ENST00000600341 CFTRP13569 1480 aa32.28■■■□□ 2.76
USF2-213ENST00000600341 ERCC6Q03468 1493 aa32.28■■■□□ 2.76
USF2-213ENST00000600341 PDS5BQ9NTI5 1447 aa32.2■■■□□ 2.75
USF2-213ENST00000600341 KIF21AQ7Z4S6 1674 aa32.16■■■□□ 2.74
USF2-213ENST00000600341 FANCD2Q9BXW9 1451 aa32.06■■■□□ 2.72
USF2-213ENST00000600341 PRDM2Q13029 1718 aa32.02■■■□□ 2.72
USF2-213ENST00000600341 THOC2Q8NI27 1593 aaKnown RBP32.01■■■□□ 2.71
USF2-213ENST00000600341 CEP164Q9UPV0 1460 aa31.99■■■□□ 2.71
USF2-213ENST00000600341 MRC2Q9UBG0 1479 aa31.9■■■□□ 2.7
USF2-213ENST00000600341 CUX2O14529 1486 aa31.85■■■□□ 2.69
USF2-213ENST00000600341 WDR62O43379 1518 aa31.79■■■□□ 2.68
USF2-213ENST00000600341 URB2Q14146 1524 aaKnown RBP31.76■■■□□ 2.68
USF2-213ENST00000600341 TOPBP1Q92547 1522 aa31.58■■■□□ 2.65
USF2-213ENST00000600341 DNMBPQ6XZF7 1577 aa31.55■■■□□ 2.64
USF2-213ENST00000600341 ABCC8Q09428 1581 aa31.5■■■□□ 2.63
USF2-213ENST00000600341 CUX1P39880 1505 aa31.46■■■□□ 2.63
USF2-213ENST00000600341 POLA1P09884 1462 aaPredicted RBP31.34■■■□□ 2.61
USF2-213ENST00000600341 WRNQ14191 1432 aaPredicted RBP eCLIP31.3■■■□□ 2.6
USF2-213ENST00000600341 FGD5Q6ZNL6 1462 aa31.3■■■□□ 2.6
USF2-213ENST00000600341 IFT140Q96RY7 1462 aa31.3■■■□□ 2.6
USF2-213ENST00000600341 SYNJ1O43426 1573 aa31.26■■■□□ 2.6
USF2-213ENST00000600341 RAD54L2Q9Y4B4 1467 aa31.23■■■□□ 2.59
USF2-213ENST00000600341 TARBP1Q13395 1621 aaKnown RBP31.23■■■□□ 2.59
USF2-213ENST00000600341 TOP2BQ02880 1626 aa31.2■■■□□ 2.59
USF2-213ENST00000600341 BIVM-ERCC5R4GMW8 1640 aa31.2■■■□□ 2.59
USF2-213ENST00000600341 ZNF608Q9ULD9 1512 aaPredicted RBP31.2■■■□□ 2.59
USF2-213ENST00000600341 SOGA1O94964 1423 aa31.18■■■□□ 2.58
USF2-213ENST00000600341 EIF4G3O43432 1585 aaKnown RBP31.07■■■□□ 2.56
USF2-213ENST00000600341 AQRO60306 1485 aaKnown RBP eCLIP31.04■■■□□ 2.562e-7■□□□□ 9.8
USF2-213ENST00000600341 WDR97A6NE52 1622 aa31.03■■■□□ 2.56
USF2-213ENST00000600341 TDRD9Q8NDG6 1382 aaKnown RBP31.01■■■□□ 2.56
USF2-213ENST00000600341 ABCA10Q8WWZ4 1543 aa30.99■■■□□ 2.55
USF2-213ENST00000600341 ABCA5Q8WWZ7 1642 aa30.86■■■□□ 2.53
USF2-213ENST00000600341 GAPVD1Q14C86 1478 aa30.83■■■□□ 2.53
USF2-213ENST00000600341 GRIN2BQ13224 1484 aa30.79■■■□□ 2.52
USF2-213ENST00000600341 SNAPC4Q5SXM2 1469 aa30.76■■■□□ 2.52
USF2-213ENST00000600341 PBRM1Q86U86 1689 aa30.76■■■□□ 2.51
USF2-213ENST00000600341 TRIM41Q8WV44 630 aa30.68■■■□□ 2.5
USF2-213ENST00000600341 MAGI1Q96QZ7 1491 aaPredicted RBP30.68■■■□□ 2.5
USF2-213ENST00000600341 CHD1O14646 1710 aa30.62■■■□□ 2.49
USF2-213ENST00000600341 DNAJC5Q9H3Z4 198 aa30.6■■■□□ 2.49
USF2-213ENST00000600341 KIF27Q86VH2 1401 aa30.6■■■□□ 2.49
USF2-213ENST00000600341 ERICH3Q5RHP9 1530 aa30.59■■■□□ 2.49
USF2-213ENST00000600341 FBLN2P98095 1184 aa30.57■■■□□ 2.48
USF2-213ENST00000600341 SYNJ2O15056 1496 aa30.55■■■□□ 2.48
USF2-213ENST00000600341 ADAMTS12P58397 1594 aa30.55■■■□□ 2.48
USF2-213ENST00000600341 OSCARQ8IYS5 282 aa30.54■■■□□ 2.48
USF2-213ENST00000600341 CHIC1Q5VXU3 224 aa30.52■■■□□ 2.48
USF2-213ENST00000600341 CHMP7Q8WUX9 453 aaPredicted RBP30.51■■■□□ 2.47
USF2-213ENST00000600341 RUSC2Q8N2Y8 1516 aa30.49■■■□□ 2.47
USF2-213ENST00000600341 IGF1RP08069 1367 aa30.48■■■□□ 2.47
USF2-213ENST00000600341 FHAD1B1AJZ9 1412 aa30.47■■■□□ 2.47
USF2-213ENST00000600341 GRIN2AQ12879 1464 aa30.41■■■□□ 2.46
USF2-213ENST00000600341 CUL7Q14999 1698 aa30.35■■■□□ 2.45
USF2-213ENST00000600341 CLASP1Q7Z460 1538 aa30.3■■■□□ 2.44
USF2-213ENST00000600341 CARMIL1Q5VZK9 1371 aa30.3■■■□□ 2.44
USF2-213ENST00000600341 CEP170Q5SW79 1584 aa30.28■■■□□ 2.44
USF2-213ENST00000600341 NUP160Q12769 1436 aa30.27■■■□□ 2.44
USF2-213ENST00000600341 EEA1Q15075 1411 aa30.14■■■□□ 2.42
USF2-213ENST00000600341 RAPGEF2Q9Y4G8 1499 aa30.14■■■□□ 2.42
USF2-213ENST00000600341 ARHGEF11O15085 1522 aa30.12■■■□□ 2.41
USF2-213ENST00000600341 FAM9AQ8IZU1 332 aaPredicted RBP30.12■■■□□ 2.41
USF2-213ENST00000600341 PRXQ9BXM0 1461 aa30.11■■■□□ 2.41
USF2-213ENST00000600341 CSRNP3Q8WYN3 585 aa30.1■■■□□ 2.41
USF2-213ENST00000600341 RIMBP3CA6NJZ7 1639 aa30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms