RNA–Protein interactions for RNA: ENST00000599625.1

USF2-212, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 2

Gene USF2, Length 446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-212ENST00000599625 NISCHQ9Y2I1 1504 aa22.86■■□□□ 1.25
USF2-212ENST00000599625 ABCC9O60706 1549 aa20.42■□□□□ 0.86
USF2-212ENST00000599625 CCDC180Q9P1Z9 1646 aa20.42■□□□□ 0.86
USF2-212ENST00000599625 RB1CC1Q8TDY2 1594 aa19.41■□□□□ 0.7
USF2-212ENST00000599625 NACADO15069 1562 aa19.31■□□□□ 0.68
USF2-212ENST00000599625 DCAF8L2P0C7V8 631 aa19.25■□□□□ 0.67
USF2-212ENST00000599625 DNAJC5BQ9UF47 199 aa19.14■□□□□ 0.65
USF2-212ENST00000599625 MYO15BQ96JP2 1530 aa19.08■□□□□ 0.64
USF2-212ENST00000599625 PABPN1Q86U42 306 aaKnown RBP eCLIP19.05■□□□□ 0.64
USF2-212ENST00000599625 ZCCHC6Q5VYS8 1495 aaKnown RBP18.97■□□□□ 0.63
USF2-212ENST00000599625 UNC13AQ9UPW8 1703 aa18.95■□□□□ 0.62
USF2-212ENST00000599625 BICRAQ9NZM4 1560 aa18.9■□□□□ 0.62
USF2-212ENST00000599625 DCAF1Q9Y4B6 1507 aa18.87■□□□□ 0.61
USF2-212ENST00000599625 SCRIBQ14160 1630 aa18.66■□□□□ 0.58
USF2-212ENST00000599625 SHROOM4Q9ULL8 1493 aa18.6■□□□□ 0.57
USF2-212ENST00000599625 CC2D2AQ9P2K1 1620 aa18.41■□□□□ 0.54
USF2-212ENST00000599625 EIF4G1Q04637 1599 aaKnown RBP18.4■□□□□ 0.54
USF2-212ENST00000599625 CECR2Q9BXF3 1484 aa18.37■□□□□ 0.53
USF2-212ENST00000599625 NCAPD3P42695 1498 aa17.86■□□□□ 0.45
USF2-212ENST00000599625 ATAD2BQ9ULI0 1458 aa17.82■□□□□ 0.44
USF2-212ENST00000599625 SMARCA4P51532 1647 aa17.8■□□□□ 0.44
USF2-212ENST00000599625 SMARCA2P51531 1590 aa17.74■□□□□ 0.43
USF2-212ENST00000599625 BAZ1AQ9NRL2 1556 aaPredicted RBP17.71■□□□□ 0.43
USF2-212ENST00000599625 HMGXB3Q12766 1538 aa17.71■□□□□ 0.43
USF2-212ENST00000599625 MROH2BQ7Z745 1585 aa17.64■□□□□ 0.41
USF2-212ENST00000599625 BAZ1BQ9UIG0 1483 aaKnown RBP17.63■□□□□ 0.41
USF2-212ENST00000599625 PEG3Q9GZU2 1588 aa17.62■□□□□ 0.41
USF2-212ENST00000599625 ERCC6Q03468 1493 aa17.58■□□□□ 0.41
USF2-212ENST00000599625 NESP48681 1621 aa17.58■□□□□ 0.4
USF2-212ENST00000599625 CUX2O14529 1486 aa17.52■□□□□ 0.4
USF2-212ENST00000599625 DNAJC5Q9H3Z4 198 aa17.45■□□□□ 0.38
USF2-212ENST00000599625 LAMC3Q9Y6N6 1575 aa17.4■□□□□ 0.38
USF2-212ENST00000599625 WIZO95785 1651 aa17.39■□□□□ 0.37
USF2-212ENST00000599625 THOC2Q8NI27 1593 aaKnown RBP17.34■□□□□ 0.37
USF2-212ENST00000599625 CADPSQ9ULU8 1353 aa17.32■□□□□ 0.36
USF2-212ENST00000599625 RSF1Q96T23 1441 aaPredicted RBP17.31■□□□□ 0.36
USF2-212ENST00000599625 PDS5BQ9NTI5 1447 aa17.31■□□□□ 0.36
USF2-212ENST00000599625 KIF21AQ7Z4S6 1674 aa17.29■□□□□ 0.36
USF2-212ENST00000599625 TOP2AP11388 1531 aaKnown RBP17.19■□□□□ 0.34
USF2-212ENST00000599625 MRC2Q9UBG0 1479 aa17.18■□□□□ 0.34
USF2-212ENST00000599625 CFTRP13569 1480 aa17.14■□□□□ 0.33
USF2-212ENST00000599625 WDR62O43379 1518 aa17.13■□□□□ 0.33
USF2-212ENST00000599625 FANCD2Q9BXW9 1451 aa17.12■□□□□ 0.33
USF2-212ENST00000599625 CEP164Q9UPV0 1460 aa17.12■□□□□ 0.33
USF2-212ENST00000599625 CCDC88BA6NC98 1476 aa17.02■□□□□ 0.32
USF2-212ENST00000599625 URB2Q14146 1524 aaKnown RBP17■□□□□ 0.31
USF2-212ENST00000599625 PRDM2Q13029 1718 aa16.87■□□□□ 0.29
USF2-212ENST00000599625 TOPBP1Q92547 1522 aa16.8■□□□□ 0.28
USF2-212ENST00000599625 ZNF608Q9ULD9 1512 aaPredicted RBP16.78■□□□□ 0.28
USF2-212ENST00000599625 IFT140Q96RY7 1462 aa16.78■□□□□ 0.28
USF2-212ENST00000599625 OSCARQ8IYS5 282 aa16.74■□□□□ 0.27
USF2-212ENST00000599625 DNMBPQ6XZF7 1577 aa16.73■□□□□ 0.27
USF2-212ENST00000599625 ABCC8Q09428 1581 aa16.72■□□□□ 0.27
USF2-212ENST00000599625 TRIM41Q8WV44 630 aa16.72■□□□□ 0.27
USF2-212ENST00000599625 AEBP2Q6ZN18 517 aaPredicted RBP16.69■□□□□ 0.26
USF2-212ENST00000599625 TARBP1Q13395 1621 aaKnown RBP16.65■□□□□ 0.26
USF2-212ENST00000599625 POLA1P09884 1462 aaPredicted RBP16.65■□□□□ 0.26
USF2-212ENST00000599625 EIF4G3O43432 1585 aaKnown RBP16.64■□□□□ 0.25
USF2-212ENST00000599625 AQRO60306 1485 aaKnown RBP eCLIP16.63■□□□□ 0.252e-7■□□□□ 9.8
USF2-212ENST00000599625 RAD54L2Q9Y4B4 1467 aa16.61■□□□□ 0.25
USF2-212ENST00000599625 SUPT5HO00267 1087 aaKnown RBP16.59■□□□□ 0.25
USF2-212ENST00000599625 CUX1P39880 1505 aa16.57■□□□□ 0.24
USF2-212ENST00000599625 SOGA1O94964 1423 aa16.56■□□□□ 0.24
USF2-212ENST00000599625 FGD5Q6ZNL6 1462 aa16.55■□□□□ 0.24
USF2-212ENST00000599625 TDRD9Q8NDG6 1382 aaKnown RBP16.54■□□□□ 0.24
USF2-212ENST00000599625 RIMBP3CA6NJZ7 1639 aa16.52■□□□□ 0.23
USF2-212ENST00000599625 RIMBP3BA6NNM3 1639 aa16.52■□□□□ 0.23
USF2-212ENST00000599625 RIMBP3Q9UFD9 1639 aa16.52■□□□□ 0.23
USF2-212ENST00000599625 ARHGEF11O15085 1522 aa16.49■□□□□ 0.23
USF2-212ENST00000599625 CHD1O14646 1710 aa16.48■□□□□ 0.23
USF2-212ENST00000599625 FBLN2P98095 1184 aa16.47■□□□□ 0.23
USF2-212ENST00000599625 SNAPC4Q5SXM2 1469 aa16.45■□□□□ 0.22
USF2-212ENST00000599625 WDR97A6NE52 1622 aa16.43■□□□□ 0.22
USF2-212ENST00000599625 GRIN2BQ13224 1484 aa16.41■□□□□ 0.22
USF2-212ENST00000599625 MAGI1Q96QZ7 1491 aaPredicted RBP16.39■□□□□ 0.21
USF2-212ENST00000599625 GAPVD1Q14C86 1478 aa16.36■□□□□ 0.21
USF2-212ENST00000599625 ABCA10Q8WWZ4 1543 aa16.36■□□□□ 0.21
USF2-212ENST00000599625 CYB5RLQ6IPT4 315 aa16.36■□□□□ 0.21
USF2-212ENST00000599625 CHMP7Q8WUX9 453 aaPredicted RBP16.36■□□□□ 0.21
USF2-212ENST00000599625 ARAP1Q96P48 1450 aa16.35■□□□□ 0.21
USF2-212ENST00000599625 CLASP1Q7Z460 1538 aa16.35■□□□□ 0.21
USF2-212ENST00000599625 SYNJ2O15056 1496 aa16.34■□□□□ 0.21
USF2-212ENST00000599625 ABCA5Q8WWZ7 1642 aa16.32■□□□□ 0.2
USF2-212ENST00000599625 WRNQ14191 1432 aaPredicted RBP eCLIP16.31■□□□□ 0.2
USF2-212ENST00000599625 PBRM1Q86U86 1689 aa16.3■□□□□ 0.2
USF2-212ENST00000599625 SYNJ1O43426 1573 aa16.3■□□□□ 0.2
USF2-212ENST00000599625 TOP2BQ02880 1626 aa16.29■□□□□ 0.2
USF2-212ENST00000599625 BIVM-ERCC5R4GMW8 1640 aa16.27■□□□□ 0.2
USF2-212ENST00000599625 GRIN2AQ12879 1464 aa16.2■□□□□ 0.18
USF2-212ENST00000599625 ADAMTS12P58397 1594 aa16.2■□□□□ 0.18
USF2-212ENST00000599625 FHAD1B1AJZ9 1412 aa16.16■□□□□ 0.18
USF2-212ENST00000599625 NUP160Q12769 1436 aa16.16■□□□□ 0.18
USF2-212ENST00000599625 CEP170Q5SW79 1584 aa16.14■□□□□ 0.17
USF2-212ENST00000599625 ERICH3Q5RHP9 1530 aa16.14■□□□□ 0.17
USF2-212ENST00000599625 TRHP20396 242 aaPredicted RBP16.13■□□□□ 0.17
USF2-212ENST00000599625 ERCC6L2Q5T890 1561 aa16.12■□□□□ 0.17
USF2-212ENST00000599625 SHROOM2Q13796 1616 aa16.05■□□□□ 0.16
USF2-212ENST00000599625 IGF1RP08069 1367 aa16■□□□□ 0.15
USF2-212ENST00000599625 PRG4Q92954 1404 aaPredicted RBP15.99■□□□□ 0.15
USF2-212ENST00000599625 JPH4Q96JJ6 628 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms