RNA–Protein interactions for RNA: ENST00000514654.5

ATP2C1-222, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2C1, Length 4,730 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-222ENST00000514654 DCAF8L2P0C7V8 631 aa11.11□□□□□ -0.63
ATP2C1-222ENST00000514654 NISCHQ9Y2I1 1504 aa10.93□□□□□ -0.66
ATP2C1-222ENST00000514654 SUPT5HO00267 1087 aaKnown RBP10.56□□□□□ -0.72
ATP2C1-222ENST00000514654 SHROOM4Q9ULL8 1493 aa10.49□□□□□ -0.73
ATP2C1-222ENST00000514654 EHMT2Q96KQ7 1210 aa10.2□□□□□ -0.78
ATP2C1-222ENST00000514654 FAM9AQ8IZU1 332 aaPredicted RBP9.95□□□□□ -0.82
ATP2C1-222ENST00000514654 TTBK1Q5TCY1 1321 aaPredicted RBP9.81□□□□□ -0.84
ATP2C1-222ENST00000514654 PCGF6Q9BYE7 350 aa9.74□□□□□ -0.85
ATP2C1-222ENST00000514654 RANGAP1P46060 587 aaPredicted RBP9.73□□□□□ -0.85
ATP2C1-222ENST00000514654 TRIM41Q8WV44 630 aa9.73□□□□□ -0.85
ATP2C1-222ENST00000514654 APLP2Q06481 763 aa9.72□□□□□ -0.85
ATP2C1-222ENST00000514654 UBTFP17480 764 aaKnown RBP9.57□□□□□ -0.88
ATP2C1-222ENST00000514654 PPARGC1BQ86YN6 1023 aaKnown RBP9.55□□□□□ -0.88
ATP2C1-222ENST00000514654 ATP1B4Q9UN42 357 aaPredicted RBP9.54□□□□□ -0.88
ATP2C1-222ENST00000514654 LOC105371045A0A1W2PR82 267 aa9.48□□□□□ -0.89
ATP2C1-222ENST00000514654 CHIC1Q5VXU3 224 aa9.47□□□□□ -0.89
ATP2C1-222ENST00000514654 CCER1Q8TC90 406 aaPredicted RBP9.47□□□□□ -0.89
ATP2C1-222ENST00000514654 ABCC9O60706 1549 aa9.43□□□□□ -0.9
ATP2C1-222ENST00000514654 PABPN1Q86U42 306 aaKnown RBP eCLIP9.4□□□□□ -0.9
ATP2C1-222ENST00000514654 ZEB1P37275 1124 aaPredicted RBP9.33□□□□□ -0.92
ATP2C1-222ENST00000514654 TRIM26Q12899 539 aaPredicted RBP9.3□□□□□ -0.92
ATP2C1-222ENST00000514654 ITGAEP38570 1179 aa9.28□□□□□ -0.92
ATP2C1-222ENST00000514654 PELP1Q8IZL8 1130 aaKnown RBP9.24□□□□□ -0.93
ATP2C1-222ENST00000514654 HNRNPUL2Q1KMD3 747 aaKnown RBP9.23□□□□□ -0.93
ATP2C1-222ENST00000514654 YTHDC1Q96MU7 727 aaKnown RBP9.22□□□□□ -0.93
ATP2C1-222ENST00000514654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.21□□□□□ -0.94
ATP2C1-222ENST00000514654 CENPBP07199 599 aaPredicted RBP9.2□□□□□ -0.94
ATP2C1-222ENST00000514654 HRCP23327 699 aa9.19□□□□□ -0.94
ATP2C1-222ENST00000514654 MYT1LQ9UL68 1186 aa9.08□□□□□ -0.96
ATP2C1-222ENST00000514654 POLR3GLQ9BT43 218 aa9.05□□□□□ -0.96
ATP2C1-222ENST00000514654 CNGB1Q14028 1251 aaPredicted RBP9.05□□□□□ -0.96
ATP2C1-222ENST00000514654 ZCCHC6Q5VYS8 1495 aaKnown RBP9.04□□□□□ -0.96
ATP2C1-222ENST00000514654 FAM50AQ14320 339 aaKnown RBP9.02□□□□□ -0.96
ATP2C1-222ENST00000514654 SCRIBQ14160 1630 aa9.02□□□□□ -0.97
ATP2C1-222ENST00000514654 NEFLP07196 543 aa8.98□□□□□ -0.97
ATP2C1-222ENST00000514654 P3H3Q8IVL6 736 aa8.98□□□□□ -0.97
ATP2C1-222ENST00000514654 FBLN2P98095 1184 aa8.98□□□□□ -0.97
ATP2C1-222ENST00000514654 CSRNP3Q8WYN3 585 aa8.98□□□□□ -0.97
ATP2C1-222ENST00000514654 ARID3CA6NKF2 412 aa8.95□□□□□ -0.98
ATP2C1-222ENST00000514654 NEUROD1Q13562 356 aa8.94□□□□□ -0.98
ATP2C1-222ENST00000514654 TRIM52Q96A61 297 aa8.92□□□□□ -0.98
ATP2C1-222ENST00000514654 DIEXFQ68CQ4 756 aaKnown RBP8.92□□□□□ -0.98
ATP2C1-222ENST00000514654 ERICH6Q7L0X2 663 aa8.91□□□□□ -0.98
ATP2C1-222ENST00000514654 CCDC180Q9P1Z9 1646 aa8.86□□□□□ -0.99
ATP2C1-222ENST00000514654 ZNF326Q5BKZ1 582 aaKnown RBP8.83□□□□□ -1
ATP2C1-222ENST00000514654 SLC4A1APQ9BWU0 796 aaKnown RBP8.83□□□□□ -1
ATP2C1-222ENST00000514654 RSF1Q96T23 1441 aaPredicted RBP8.79□□□□□ -1
ATP2C1-222ENST00000514654 ZNF777Q9ULD5 760 aaPredicted RBP8.78□□□□□ -1
ATP2C1-222ENST00000514654 MYO15BQ96JP2 1530 aa8.75□□□□□ -1.01
ATP2C1-222ENST00000514654 ZNF316A6NFI3 1004 aaPredicted RBP8.75□□□□□ -1.01
ATP2C1-222ENST00000514654 RB1CC1Q8TDY2 1594 aa8.71□□□□□ -1.01
ATP2C1-222ENST00000514654 BCANQ96GW7 911 aa8.71□□□□□ -1.02
ATP2C1-222ENST00000514654 ANP32CO43423 234 aa8.69□□□□□ -1.02
ATP2C1-222ENST00000514654 GTF3C3Q9Y5Q9 886 aa8.69□□□□□ -1.02
ATP2C1-222ENST00000514654 CHIC2Q9UKJ5 165 aa8.69□□□□□ -1.02
ATP2C1-222ENST00000514654 DCAF1Q9Y4B6 1507 aa8.69□□□□□ -1.02
ATP2C1-222ENST00000514654 CECR2Q9BXF3 1484 aa8.68□□□□□ -1.02
ATP2C1-222ENST00000514654 CDK11AQ9UQ88 783 aaPredicted RBP8.67□□□□□ -1.02
ATP2C1-222ENST00000514654 NACADO15069 1562 aa8.65□□□□□ -1.02
ATP2C1-222ENST00000514654 CLIP1P30622 1438 aa8.64□□□□□ -1.03
ATP2C1-222ENST00000514654 DAXXQ9UER7 740 aaPredicted RBP8.62□□□□□ -1.03
ATP2C1-222ENST00000514654 WRNQ14191 1432 aaPredicted RBP eCLIP8.61□□□□□ -1.03
ATP2C1-222ENST00000514654 CHMP7Q8WUX9 453 aaPredicted RBP8.61□□□□□ -1.03
ATP2C1-222ENST00000514654 BAZ1BQ9UIG0 1483 aaKnown RBP8.61□□□□□ -1.03
ATP2C1-222ENST00000514654 DDX10Q13206 875 aaKnown RBP8.59□□□□□ -1.03
ATP2C1-222ENST00000514654 CEP162Q5TB80 1403 aa8.59□□□□□ -1.03
ATP2C1-222ENST00000514654 TONSLQ96HA7 1378 aa8.59□□□□□ -1.03
ATP2C1-222ENST00000514654 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.58□□□□□ -1.04
ATP2C1-222ENST00000514654 HIRIP3Q9BW71 556 aaPredicted RBP8.58□□□□□ -1.04
ATP2C1-222ENST00000514654 CLSPNQ9HAW4 1339 aa8.58□□□□□ -1.04
ATP2C1-222ENST00000514654 MTUS2Q5JR59 1369 aa8.58□□□□□ -1.04
ATP2C1-222ENST00000514654 CHGAP10645 457 aaKnown RBP8.58□□□□□ -1.04
ATP2C1-222ENST00000514654 ACIN1Q9UKV3 1341 aaKnown RBP8.57□□□□□ -1.04
ATP2C1-222ENST00000514654 RRP7BPQ9NSQ0 103 aa8.56□□□□□ -1.04
ATP2C1-222ENST00000514654 PLPPR3Q6T4P5 718 aa8.55□□□□□ -1.04
ATP2C1-222ENST00000514654 GOLGA3Q08378 1498 aa8.55□□□□□ -1.04
ATP2C1-222ENST00000514654 NPM1P06748 294 aaKnown RBP eCLIP8.54□□□□□ -1.04
ATP2C1-222ENST00000514654 BAZ1AQ9NRL2 1556 aaPredicted RBP8.53□□□□□ -1.04
ATP2C1-222ENST00000514654 KDM2AQ9Y2K7 1162 aa8.53□□□□□ -1.04
ATP2C1-222ENST00000514654 KCNH8Q96L42 1107 aa8.53□□□□□ -1.04
ATP2C1-222ENST00000514654 MROH2BQ7Z745 1585 aa8.53□□□□□ -1.04
ATP2C1-222ENST00000514654 SOGA1O94964 1423 aa8.53□□□□□ -1.04
ATP2C1-222ENST00000514654 TSPY4P0CV99 314 aa8.52□□□□□ -1.04
ATP2C1-222ENST00000514654 TSPY10P0CW01 314 aa8.52□□□□□ -1.04
ATP2C1-222ENST00000514654 EEA1Q15075 1411 aa8.52□□□□□ -1.05
ATP2C1-222ENST00000514654 BCL11AQ9H165 835 aa8.52□□□□□ -1.05
ATP2C1-222ENST00000514654 KIF27Q86VH2 1401 aa8.51□□□□□ -1.05
ATP2C1-222ENST00000514654 TNIKQ9UKE5 1360 aa8.51□□□□□ -1.05
ATP2C1-222ENST00000514654 FAM9BQ8IZU0 186 aa8.5□□□□□ -1.05
ATP2C1-222ENST00000514654 SENP3Q9H4L4 574 aaPredicted RBP8.5□□□□□ -1.05
ATP2C1-222ENST00000514654 SALL2Q9Y467 1007 aaPredicted RBP8.5□□□□□ -1.05
ATP2C1-222ENST00000514654 MIER1Q8N108 512 aa8.49□□□□□ -1.05
ATP2C1-222ENST00000514654 SLC24A1O60721 1099 aa8.49□□□□□ -1.05
ATP2C1-222ENST00000514654 HNRNPUQ00839 825 aaKnown RBP eCLIP8.49□□□□□ -1.05
ATP2C1-222ENST00000514654 ESF1Q9H501 851 aaKnown RBP8.48□□□□□ -1.05
ATP2C1-222ENST00000514654 STAG3Q9UJ98 1225 aa8.48□□□□□ -1.05
ATP2C1-222ENST00000514654 CCDC88BA6NC98 1476 aa8.47□□□□□ -1.05
ATP2C1-222ENST00000514654 CEP164Q9UPV0 1460 aa8.47□□□□□ -1.05
ATP2C1-222ENST00000514654 PLEKHD1A6NEE1 506 aa8.46□□□□□ -1.05
ATP2C1-222ENST00000514654 FKBP8Q14318 412 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms