RNA–Protein interactions for RNA: ENST00000450338.5

SEMA3F-207, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 1,693 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-207ENST00000450338 NISCHQ9Y2I1 1504 aa51.42■■■■■ 5.82
SEMA3F-207ENST00000450338 CCDC180Q9P1Z9 1646 aa45.12■■■■■ 4.81
SEMA3F-207ENST00000450338 ZCCHC6Q5VYS8 1495 aaKnown RBP43.1■■■■■ 4.49
SEMA3F-207ENST00000450338 ABCC9O60706 1549 aa42.97■■■■■ 4.47
SEMA3F-207ENST00000450338 DCAF1Q9Y4B6 1507 aa42.55■■■■■ 4.4
SEMA3F-207ENST00000450338 DCAF8L2P0C7V8 631 aa42.54■■■■■ 4.4
SEMA3F-207ENST00000450338 MYO15BQ96JP2 1530 aa42.23■■■■■ 4.35
SEMA3F-207ENST00000450338 NACADO15069 1562 aa42.11■■■■■ 4.33
SEMA3F-207ENST00000450338 RB1CC1Q8TDY2 1594 aa41.85■■■■■ 4.29
SEMA3F-207ENST00000450338 SHROOM4Q9ULL8 1493 aa41.53■■■■■ 4.24
SEMA3F-207ENST00000450338 SCRIBQ14160 1630 aa41.34■■■■■ 4.21
SEMA3F-207ENST00000450338 UNC13AQ9UPW8 1703 aa41■■■■■ 4.15
SEMA3F-207ENST00000450338 BICRAQ9NZM4 1560 aa40.56■■■■■ 4.08
SEMA3F-207ENST00000450338 PABPN1Q86U42 306 aaKnown RBP eCLIP40.4■■■■■ 4.06
SEMA3F-207ENST00000450338 CECR2Q9BXF3 1484 aa39.95■■■■□ 3.99
SEMA3F-207ENST00000450338 SUPT5HO00267 1087 aaKnown RBP39.76■■■■□ 3.96
SEMA3F-207ENST00000450338 BAZ1AQ9NRL2 1556 aaPredicted RBP39.75■■■■□ 3.95
SEMA3F-207ENST00000450338 RSF1Q96T23 1441 aaPredicted RBP39.68■■■■□ 3.94
SEMA3F-207ENST00000450338 MROH2BQ7Z745 1585 aa39.68■■■■□ 3.94
SEMA3F-207ENST00000450338 SMARCA4P51532 1647 aa39.63■■■■□ 3.94
SEMA3F-207ENST00000450338 EIF4G1Q04637 1599 aaKnown RBP39.38■■■■□ 3.89
SEMA3F-207ENST00000450338 WIZO95785 1651 aa39.35■■■■□ 3.89
SEMA3F-207ENST00000450338 PEG3Q9GZU2 1588 aa39.18■■■■□ 3.86
SEMA3F-207ENST00000450338 SMARCA2P51531 1590 aa39.09■■■■□ 3.85
SEMA3F-207ENST00000450338 ATAD2BQ9ULI0 1458 aa39.07■■■■□ 3.85
SEMA3F-207ENST00000450338 TOP2AP11388 1531 aaKnown RBP38.95■■■■□ 3.83
SEMA3F-207ENST00000450338 CC2D2AQ9P2K1 1620 aa38.91■■■■□ 3.82
SEMA3F-207ENST00000450338 NCAPD3P42695 1498 aa38.83■■■■□ 3.81
SEMA3F-207ENST00000450338 BAZ1BQ9UIG0 1483 aaKnown RBP38.83■■■■□ 3.81
SEMA3F-207ENST00000450338 DNAJC5BQ9UF47 199 aa38.78■■■■□ 3.8
SEMA3F-207ENST00000450338 HMGXB3Q12766 1538 aa38.76■■■■□ 3.79
SEMA3F-207ENST00000450338 CCDC88BA6NC98 1476 aa38.51■■■■□ 3.76
SEMA3F-207ENST00000450338 CFTRP13569 1480 aa37.83■■■■□ 3.65
SEMA3F-207ENST00000450338 CHIC1Q5VXU3 224 aa37.83■■■■□ 3.65
SEMA3F-207ENST00000450338 CADPSQ9ULU8 1353 aa37.79■■■■□ 3.64
SEMA3F-207ENST00000450338 PRDM2Q13029 1718 aa37.71■■■■□ 3.63
SEMA3F-207ENST00000450338 LAMC3Q9Y6N6 1575 aa37.61■■■■□ 3.61
SEMA3F-207ENST00000450338 NESP48681 1621 aa37.57■■■■□ 3.61
SEMA3F-207ENST00000450338 ABCC8Q09428 1581 aa37.55■■■■□ 3.6
SEMA3F-207ENST00000450338 TRIM41Q8WV44 630 aa37.44■■■■□ 3.58
SEMA3F-207ENST00000450338 WRNQ14191 1432 aaPredicted RBP eCLIP37.38■■■■□ 3.57
SEMA3F-207ENST00000450338 FANCD2Q9BXW9 1451 aa37.37■■■■□ 3.57
SEMA3F-207ENST00000450338 PDS5BQ9NTI5 1447 aa37.32■■■■□ 3.56
SEMA3F-207ENST00000450338 SYNJ1O43426 1573 aa37.24■■■■□ 3.55
SEMA3F-207ENST00000450338 CEP164Q9UPV0 1460 aa37.2■■■■□ 3.54
SEMA3F-207ENST00000450338 KIF21AQ7Z4S6 1674 aa37.18■■■■□ 3.54
SEMA3F-207ENST00000450338 TOP2BQ02880 1626 aa37.16■■■■□ 3.54
SEMA3F-207ENST00000450338 BIVM-ERCC5R4GMW8 1640 aa37.14■■■■□ 3.54
SEMA3F-207ENST00000450338 CUX1P39880 1505 aa37.14■■■■□ 3.54
SEMA3F-207ENST00000450338 DNMBPQ6XZF7 1577 aa36.98■■■■□ 3.51
SEMA3F-207ENST00000450338 URB2Q14146 1524 aaKnown RBP36.92■■■■□ 3.5
SEMA3F-207ENST00000450338 TOPBP1Q92547 1522 aa36.92■■■■□ 3.5
SEMA3F-207ENST00000450338 ERCC6Q03468 1493 aa36.91■■■■□ 3.5
SEMA3F-207ENST00000450338 MRC2Q9UBG0 1479 aa36.86■■■■□ 3.49
SEMA3F-207ENST00000450338 FGD5Q6ZNL6 1462 aa36.81■■■■□ 3.48
SEMA3F-207ENST00000450338 SOGA1O94964 1423 aa36.73■■■■□ 3.47
SEMA3F-207ENST00000450338 POLA1P09884 1462 aaPredicted RBP36.7■■■■□ 3.47
SEMA3F-207ENST00000450338 FAM9AQ8IZU1 332 aaPredicted RBP36.7■■■■□ 3.47
SEMA3F-207ENST00000450338 THOC2Q8NI27 1593 aaKnown RBP36.68■■■■□ 3.46
SEMA3F-207ENST00000450338 WDR62O43379 1518 aa36.68■■■■□ 3.46
SEMA3F-207ENST00000450338 EEA1Q15075 1411 aa36.63■■■■□ 3.46
SEMA3F-207ENST00000450338 RUSC2Q8N2Y8 1516 aa36.62■■■■□ 3.45
SEMA3F-207ENST00000450338 RAD54L2Q9Y4B4 1467 aa36.55■■■■□ 3.44
SEMA3F-207ENST00000450338 KIF27Q86VH2 1401 aa36.49■■■■□ 3.43
SEMA3F-207ENST00000450338 ABCA10Q8WWZ4 1543 aa36.49■■■■□ 3.43
SEMA3F-207ENST00000450338 CUX2O14529 1486 aa36.49■■■■□ 3.43
SEMA3F-207ENST00000450338 CSRNP3Q8WYN3 585 aa36.45■■■■□ 3.42
SEMA3F-207ENST00000450338 WDR97A6NE52 1622 aa36.44■■■■□ 3.42
SEMA3F-207ENST00000450338 TARBP1Q13395 1621 aaKnown RBP36.42■■■■□ 3.42
SEMA3F-207ENST00000450338 IFT140Q96RY7 1462 aa36.34■■■■□ 3.41
SEMA3F-207ENST00000450338 LOC105371045A0A1W2PR82 267 aa36.34■■■■□ 3.41
SEMA3F-207ENST00000450338 ABCA5Q8WWZ7 1642 aa36.24■■■■□ 3.39
SEMA3F-207ENST00000450338 TDRD9Q8NDG6 1382 aaKnown RBP36.24■■■■□ 3.39
SEMA3F-207ENST00000450338 IGF1RP08069 1367 aa36.19■■■■□ 3.38
SEMA3F-207ENST00000450338 KIF21BO75037 1637 aa36.18■■■■□ 3.38
SEMA3F-207ENST00000450338 GAPVD1Q14C86 1478 aa36.18■■■■□ 3.38
SEMA3F-207ENST00000450338 EHMT2Q96KQ7 1210 aa36.16■■■■□ 3.38
SEMA3F-207ENST00000450338 PRXQ9BXM0 1461 aa36.12■■■■□ 3.37
SEMA3F-207ENST00000450338 ZNF608Q9ULD9 1512 aaPredicted RBP36.11■■■■□ 3.37
SEMA3F-207ENST00000450338 AQRO60306 1485 aaKnown RBP eCLIP36.09■■■■□ 3.37
SEMA3F-207ENST00000450338 GOLGA3Q08378 1498 aa36.08■■■■□ 3.37
SEMA3F-207ENST00000450338 ERICH3Q5RHP9 1530 aa36.08■■■■□ 3.37
SEMA3F-207ENST00000450338 PBRM1Q86U86 1689 aa36.05■■■■□ 3.36
SEMA3F-207ENST00000450338 EIF4G3O43432 1585 aaKnown RBP36.02■■■■□ 3.36
SEMA3F-207ENST00000450338 RAPGEF2Q9Y4G8 1499 aa36.02■■■■□ 3.36
SEMA3F-207ENST00000450338 CUL7Q14999 1698 aa36.02■■■■□ 3.36
SEMA3F-207ENST00000450338 CARMIL1Q5VZK9 1371 aa36.01■■■■□ 3.36
SEMA3F-207ENST00000450338 GRIN2BQ13224 1484 aa35.97■■■■□ 3.35
SEMA3F-207ENST00000450338 UBTFP17480 764 aaKnown RBP35.93■■■■□ 3.34
SEMA3F-207ENST00000450338 TNIKQ9UKE5 1360 aa35.88■■■■□ 3.34
SEMA3F-207ENST00000450338 ADAMTS12P58397 1594 aa35.8■■■■□ 3.32
SEMA3F-207ENST00000450338 FHAD1B1AJZ9 1412 aa35.78■■■■□ 3.32
SEMA3F-207ENST00000450338 SNAPC4Q5SXM2 1469 aa35.77■■■■□ 3.32
SEMA3F-207ENST00000450338 MAGI1Q96QZ7 1491 aaPredicted RBP35.74■■■■□ 3.31
SEMA3F-207ENST00000450338 CEP162Q5TB80 1403 aa35.64■■■■□ 3.3
SEMA3F-207ENST00000450338 SYNJ2O15056 1496 aa35.58■■■■□ 3.29
SEMA3F-207ENST00000450338 CTTNBP2Q8WZ74 1663 aa35.56■■■■□ 3.28
SEMA3F-207ENST00000450338 GRIN2AQ12879 1464 aa35.52■■■■□ 3.28
SEMA3F-207ENST00000450338 CHMP7Q8WUX9 453 aaPredicted RBP35.5■■■■□ 3.27
SEMA3F-207ENST00000450338 CLIP1P30622 1438 aa35.48■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 201.8 ms