RNA–Protein interactions for RNA: ENST00000553263.1

MLH3-203, Transcript of mutL homolog 3, humanhuman

TSL 2

Gene MLH3, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3-203ENST00000553263 AEBP2Q6ZN18 517 aaPredicted RBP16.16■□□□□ 0.18
MLH3-203ENST00000553263 CHIC1Q5VXU3 224 aa15.26■□□□□ 0.03
MLH3-203ENST00000553263 SENP3Q9H4L4 574 aaPredicted RBP13.67□□□□□ -0.22
MLH3-203ENST00000553263 PHF23Q9BUL5 403 aaPredicted RBP13.56□□□□□ -0.24
MLH3-203ENST00000553263 FOXD1Q16676 465 aa12.83□□□□□ -0.36
MLH3-203ENST00000553263 PLPPR3Q6T4P5 718 aa12.14□□□□□ -0.47
MLH3-203ENST00000553263 PPP6R1Q9UPN7 881 aa12.02□□□□□ -0.49
MLH3-203ENST00000553263 ADRA2BP18089 450 aa11.97□□□□□ -0.49
MLH3-203ENST00000553263 PIAS4Q8N2W9 510 aaPredicted RBP11.94□□□□□ -0.5
MLH3-203ENST00000553263 MSH5O43196 834 aa11.92□□□□□ -0.5
MLH3-203ENST00000553263 POTEDQ86YR6 584 aa11.76□□□□□ -0.53
MLH3-203ENST00000553263 NISCHQ9Y2I1 1504 aa11.6□□□□□ -0.55
MLH3-203ENST00000553263 MAPK8IP2Q13387 824 aaPredicted RBP11.03□□□□□ -0.64
MLH3-203ENST00000553263 DMRT2Q9Y5R5 561 aa10.87□□□□□ -0.67
MLH3-203ENST00000553263 SCAF1Q9H7N4 1312 aaKnown RBP10.82□□□□□ -0.68
MLH3-203ENST00000553263 PPP4R3CPQ6ZMV5 832 aa10.69□□□□□ -0.7
MLH3-203ENST00000553263 HOXD11P31277 338 aaPredicted RBP10.46□□□□□ -0.73
MLH3-203ENST00000553263 CNKSR2Q8WXI2 1034 aa10.45□□□□□ -0.74
MLH3-203ENST00000553263 DCAF8L1A6NGE4 600 aa10.43□□□□□ -0.74
MLH3-203ENST00000553263 RNF216Q9NWF9 866 aaPredicted RBP10.36□□□□□ -0.75
MLH3-203ENST00000553263 CACNB1Q02641 598 aaPredicted RBP10.28□□□□□ -0.76
MLH3-203ENST00000553263 RNF39Q9H2S5 420 aa10.22□□□□□ -0.77
MLH3-203ENST00000553263 CCDC180Q9P1Z9 1646 aa10.21□□□□□ -0.78
MLH3-203ENST00000553263 NCBP3Q53F19 620 aaKnown RBP10.19□□□□□ -0.78
MLH3-203ENST00000553263 NPM3O75607 178 aaKnown RBP10.13□□□□□ -0.79
MLH3-203ENST00000553263 EHMT2Q96KQ7 1210 aa10.08□□□□□ -0.8
MLH3-203ENST00000553263 DNAJC5BQ9UF47 199 aa10.04□□□□□ -0.8
MLH3-203ENST00000553263 C1QBPQ07021 282 aaKnown RBP10.02□□□□□ -0.81
MLH3-203ENST00000553263 KCNA4P22459 653 aa10.01□□□□□ -0.81
MLH3-203ENST00000553263 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.96□□□□□ -0.82
MLH3-203ENST00000553263 ABCC9O60706 1549 aa9.8□□□□□ -0.84
MLH3-203ENST00000553263 U3KPZ7 1027 aaPredicted RBP9.79□□□□□ -0.84
MLH3-203ENST00000553263 ZCCHC6Q5VYS8 1495 aaKnown RBP9.74□□□□□ -0.85
MLH3-203ENST00000553263 SLC4A2P04920 1241 aa9.71□□□□□ -0.86
MLH3-203ENST00000553263 SPINK5Q9NQ38 1064 aaPredicted RBP9.68□□□□□ -0.86
MLH3-203ENST00000553263 CSRNP3Q8WYN3 585 aa9.65□□□□□ -0.86
MLH3-203ENST00000553263 SLC4A1APQ9BWU0 796 aaKnown RBP9.63□□□□□ -0.87
MLH3-203ENST00000553263 DCAF1Q9Y4B6 1507 aa9.61□□□□□ -0.87
MLH3-203ENST00000553263 CAPN15O75808 1086 aa9.61□□□□□ -0.87
MLH3-203ENST00000553263 DSG3P32926 999 aa9.58□□□□□ -0.88
MLH3-203ENST00000553263 MYO15BQ96JP2 1530 aa9.57□□□□□ -0.88
MLH3-203ENST00000553263 NACADO15069 1562 aa9.53□□□□□ -0.88
MLH3-203ENST00000553263 RB1CC1Q8TDY2 1594 aa9.47□□□□□ -0.89
MLH3-203ENST00000553263 TRHP20396 242 aaPredicted RBP9.47□□□□□ -0.89
MLH3-203ENST00000553263 ABCB7O75027 752 aa9.44□□□□□ -0.9
MLH3-203ENST00000553263 DCAF8L2P0C7V8 631 aa9.43□□□□□ -0.9
MLH3-203ENST00000553263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.38□□□□□ -0.91
MLH3-203ENST00000553263 HNRNPUL2Q1KMD3 747 aaKnown RBP9.38□□□□□ -0.91
MLH3-203ENST00000553263 ZNF219Q9P2Y4 722 aaPredicted RBP9.38□□□□□ -0.91
MLH3-203ENST00000553263 APLP2Q06481 763 aa9.37□□□□□ -0.91
MLH3-203ENST00000553263 SAMD1Q6SPF0 538 aaPredicted RBP9.36□□□□□ -0.91
MLH3-203ENST00000553263 SCRIBQ14160 1630 aa9.34□□□□□ -0.91
MLH3-203ENST00000553263 UNC13AQ9UPW8 1703 aa9.34□□□□□ -0.92
MLH3-203ENST00000553263 MYCNP04198 464 aaPredicted RBP9.32□□□□□ -0.92
MLH3-203ENST00000553263 BICRAQ9NZM4 1560 aa9.3□□□□□ -0.92
MLH3-203ENST00000553263 SHROOM4Q9ULL8 1493 aa9.24□□□□□ -0.93
MLH3-203ENST00000553263 ZBTB22O15209 634 aa9.23□□□□□ -0.93
MLH3-203ENST00000553263 FOXD4L1Q9NU39 408 aa9.22□□□□□ -0.93
MLH3-203ENST00000553263 ATF5Q9Y2D1 282 aaPredicted RBP9.22□□□□□ -0.93
MLH3-203ENST00000553263 POLA2Q14181 598 aa9.21□□□□□ -0.94
MLH3-203ENST00000553263 POTEHQ6S545 545 aa9.18□□□□□ -0.94
MLH3-203ENST00000553263 PABPN1Q86U42 306 aaKnown RBP eCLIP9.17□□□□□ -0.94
MLH3-203ENST00000553263 SLC24A1O60721 1099 aa9.06□□□□□ -0.96
MLH3-203ENST00000553263 CECR2Q9BXF3 1484 aa9.06□□□□□ -0.96
MLH3-203ENST00000553263 RBM42Q9BTD8 480 aaKnown RBP9.04□□□□□ -0.96
MLH3-203ENST00000553263 RTN4Q9NQC3 1192 aaKnown RBP8.98□□□□□ -0.97
MLH3-203ENST00000553263 EIF4G1Q04637 1599 aaKnown RBP8.98□□□□□ -0.97
MLH3-203ENST00000553263 MROH2BQ7Z745 1585 aa8.98□□□□□ -0.97
MLH3-203ENST00000553263 SMARCA4P51532 1647 aa8.96□□□□□ -0.98
MLH3-203ENST00000553263 BAZ1AQ9NRL2 1556 aaPredicted RBP8.95□□□□□ -0.98
MLH3-203ENST00000553263 AMER1Q5JTC6 1135 aaPredicted RBP8.93□□□□□ -0.98
MLH3-203ENST00000553263 RSF1Q96T23 1441 aaPredicted RBP8.92□□□□□ -0.98
MLH3-203ENST00000553263 CHRDL2Q6WN34 429 aa8.92□□□□□ -0.98
MLH3-203ENST00000553263 OSCARQ8IYS5 282 aa8.92□□□□□ -0.98
MLH3-203ENST00000553263 ZBTB12Q9Y330 459 aaPredicted RBP8.92□□□□□ -0.98
MLH3-203ENST00000553263 ATXN8OSP0DMR3 200 aa8.91□□□□□ -0.98
MLH3-203ENST00000553263 PEG3Q9GZU2 1588 aa8.9□□□□□ -0.98
MLH3-203ENST00000553263 CC2D2AQ9P2K1 1620 aa8.89□□□□□ -0.99
MLH3-203ENST00000553263 AKT1S1Q96B36 256 aa8.88□□□□□ -0.99
MLH3-203ENST00000553263 WIZO95785 1651 aa8.87□□□□□ -0.99
MLH3-203ENST00000553263 ATAD2BQ9ULI0 1458 aa8.86□□□□□ -0.99
MLH3-203ENST00000553263 REM2Q8IYK8 340 aaPredicted RBP8.83□□□□□ -1
MLH3-203ENST00000553263 NCAPD3P42695 1498 aa8.82□□□□□ -1
MLH3-203ENST00000553263 SMARCA2P51531 1590 aa8.81□□□□□ -1
MLH3-203ENST00000553263 HMGXB3Q12766 1538 aa8.8□□□□□ -1
MLH3-203ENST00000553263 TOP2AP11388 1531 aaKnown RBP8.78□□□□□ -1
MLH3-203ENST00000553263 MKRN4PQ13434 485 aaPredicted RBP8.77□□□□□ -1.01
MLH3-203ENST00000553263 BAZ1BQ9UIG0 1483 aaKnown RBP8.76□□□□□ -1.01
MLH3-203ENST00000553263 PITPNM1O00562 1244 aa8.75□□□□□ -1.01
MLH3-203ENST00000553263 PIP4P2Q8N4L2 257 aa8.74□□□□□ -1.01
MLH3-203ENST00000553263 FBLN2P98095 1184 aa8.73□□□□□ -1.01
MLH3-203ENST00000553263 SUPT5HO00267 1087 aaKnown RBP8.72□□□□□ -1.01
MLH3-203ENST00000553263 FKBP8Q14318 412 aa8.7□□□□□ -1.02
MLH3-203ENST00000553263 SPDYE2BA6NHP3 402 aa8.69□□□□□ -1.02
MLH3-203ENST00000553263 SPDYE6P0CI01 402 aa8.69□□□□□ -1.02
MLH3-203ENST00000553263 SPDYE2Q495Y8 402 aa8.69□□□□□ -1.02
MLH3-203ENST00000553263 CCDC88BA6NC98 1476 aa8.67□□□□□ -1.02
MLH3-203ENST00000553263 FXR2P51116 673 aaKnown RBP eCLIP8.67□□□□□ -1.02
MLH3-203ENST00000553263 ZNF692Q9BU19 519 aaPredicted RBP8.61□□□□□ -1.03
MLH3-203ENST00000553263 SSUH2Q9Y2M2 353 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms