RNA–Protein interactions for RNA: ENST00000465309.6

LMO7-208, Transcript of LIM domain 7, humanhuman

TSL 3

Gene LMO7, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-208ENST00000465309 AEBP2Q6ZN18 517 aaPredicted RBP17.15■□□□□ 0.34
LMO7-208ENST00000465309 NISCHQ9Y2I1 1504 aa16.68■□□□□ 0.26
LMO7-208ENST00000465309 ABCC9O60706 1549 aa16.5■□□□□ 0.23
LMO7-208ENST00000465309 CHIC1Q5VXU3 224 aa16.32■□□□□ 0.2
LMO7-208ENST00000465309 DNAJC5BQ9UF47 199 aa16.31■□□□□ 0.2
LMO7-208ENST00000465309 DNAJC5Q9H3Z4 198 aa15.68■□□□□ 0.1
LMO7-208ENST00000465309 CCDC180Q9P1Z9 1646 aa15.43■□□□□ 0.06
LMO7-208ENST00000465309 PABPN1Q86U42 306 aaKnown RBP eCLIP15.19■□□□□ 0.02
LMO7-208ENST00000465309 RB1CC1Q8TDY2 1594 aa15.19■□□□□ 0.02
LMO7-208ENST00000465309 CECR2Q9BXF3 1484 aa14.92□□□□□ -0.02
LMO7-208ENST00000465309 UNC13AQ9UPW8 1703 aa14.91□□□□□ -0.02
LMO7-208ENST00000465309 CC2D2AQ9P2K1 1620 aa14.81□□□□□ -0.04
LMO7-208ENST00000465309 NACADO15069 1562 aa14.79□□□□□ -0.04
LMO7-208ENST00000465309 BICRAQ9NZM4 1560 aa14.77□□□□□ -0.04
LMO7-208ENST00000465309 TRIM41Q8WV44 630 aa14.73□□□□□ -0.05
LMO7-208ENST00000465309 DCAF8L2P0C7V8 631 aa14.67□□□□□ -0.06
LMO7-208ENST00000465309 CUX2O14529 1486 aa14.54□□□□□ -0.08
LMO7-208ENST00000465309 SENP3Q9H4L4 574 aaPredicted RBP14.51□□□□□ -0.09
LMO7-208ENST00000465309 EIF4G1Q04637 1599 aaKnown RBP14.51□□□□□ -0.09
LMO7-208ENST00000465309 SHROOM4Q9ULL8 1493 aa14.38□□□□□ -0.11
LMO7-208ENST00000465309 PHF23Q9BUL5 403 aaPredicted RBP14.37□□□□□ -0.11
LMO7-208ENST00000465309 ERCC6Q03468 1493 aa14.32□□□□□ -0.12
LMO7-208ENST00000465309 MYO15BQ96JP2 1530 aa14.15□□□□□ -0.14
LMO7-208ENST00000465309 SCRIBQ14160 1630 aa14.1□□□□□ -0.15
LMO7-208ENST00000465309 THOC2Q8NI27 1593 aaKnown RBP13.9□□□□□ -0.18
LMO7-208ENST00000465309 NESP48681 1621 aa13.87□□□□□ -0.19
LMO7-208ENST00000465309 SMARCA2P51531 1590 aa13.81□□□□□ -0.2
LMO7-208ENST00000465309 BAZ1AQ9NRL2 1556 aaPredicted RBP13.78□□□□□ -0.2
LMO7-208ENST00000465309 TRHP20396 242 aaPredicted RBP13.77□□□□□ -0.21
LMO7-208ENST00000465309 RIMBP3CA6NJZ7 1639 aa13.72□□□□□ -0.21
LMO7-208ENST00000465309 RIMBP3BA6NNM3 1639 aa13.72□□□□□ -0.21
LMO7-208ENST00000465309 RIMBP3Q9UFD9 1639 aa13.72□□□□□ -0.21
LMO7-208ENST00000465309 OSCARQ8IYS5 282 aa13.72□□□□□ -0.21
LMO7-208ENST00000465309 KIF21AQ7Z4S6 1674 aa13.69□□□□□ -0.22
LMO7-208ENST00000465309 ILDR1Q86SU0 546 aaPredicted RBP13.68□□□□□ -0.22
LMO7-208ENST00000465309 NCAPD3P42695 1498 aa13.63□□□□□ -0.23
LMO7-208ENST00000465309 DCAF1Q9Y4B6 1507 aa13.63□□□□□ -0.23
LMO7-208ENST00000465309 ZCCHC6Q5VYS8 1495 aaKnown RBP13.61□□□□□ -0.23
LMO7-208ENST00000465309 FOXD1Q16676 465 aa13.58□□□□□ -0.24
LMO7-208ENST00000465309 ARHGEF11O15085 1522 aa13.54□□□□□ -0.24
LMO7-208ENST00000465309 LAMC3Q9Y6N6 1575 aa13.54□□□□□ -0.24
LMO7-208ENST00000465309 CYB5RLQ6IPT4 315 aa13.53□□□□□ -0.24
LMO7-208ENST00000465309 ATAD2BQ9ULI0 1458 aa13.49□□□□□ -0.25
LMO7-208ENST00000465309 PDS5BQ9NTI5 1447 aa13.49□□□□□ -0.25
LMO7-208ENST00000465309 HMGXB3Q12766 1538 aa13.48□□□□□ -0.25
LMO7-208ENST00000465309 MRC2Q9UBG0 1479 aa13.47□□□□□ -0.25
LMO7-208ENST00000465309 WDR62O43379 1518 aa13.44□□□□□ -0.26
LMO7-208ENST00000465309 BAZ1BQ9UIG0 1483 aaKnown RBP13.36□□□□□ -0.27
LMO7-208ENST00000465309 ARAP1Q96P48 1450 aa13.34□□□□□ -0.27
LMO7-208ENST00000465309 POTEDQ86YR6 584 aa13.29□□□□□ -0.28
LMO7-208ENST00000465309 SMARCA4P51532 1647 aa13.27□□□□□ -0.29
LMO7-208ENST00000465309 CEP164Q9UPV0 1460 aa13.23□□□□□ -0.29
LMO7-208ENST00000465309 CADPSQ9ULU8 1353 aa13.2□□□□□ -0.3
LMO7-208ENST00000465309 CHD1O14646 1710 aa13.12□□□□□ -0.31
LMO7-208ENST00000465309 FANCD2Q9BXW9 1451 aa13.11□□□□□ -0.31
LMO7-208ENST00000465309 ZNF608Q9ULD9 1512 aaPredicted RBP13.09□□□□□ -0.31
LMO7-208ENST00000465309 RSF1Q96T23 1441 aaPredicted RBP13.08□□□□□ -0.32
LMO7-208ENST00000465309 URB2Q14146 1524 aaKnown RBP13.07□□□□□ -0.32
LMO7-208ENST00000465309 PEG3Q9GZU2 1588 aa13.06□□□□□ -0.32
LMO7-208ENST00000465309 PLPPR3Q6T4P5 718 aa13.04□□□□□ -0.32
LMO7-208ENST00000465309 FBLN2P98095 1184 aa13.03□□□□□ -0.32
LMO7-208ENST00000465309 KDM4FA0A1W2PPD8 638 aa12.99□□□□□ -0.33
LMO7-208ENST00000465309 EIF4G3O43432 1585 aaKnown RBP12.98□□□□□ -0.33
LMO7-208ENST00000465309 LMTK3Q96Q04 1460 aa12.96□□□□□ -0.34
LMO7-208ENST00000465309 IFT140Q96RY7 1462 aa12.96□□□□□ -0.34
LMO7-208ENST00000465309 ERCC6L2Q5T890 1561 aa12.91□□□□□ -0.34
LMO7-208ENST00000465309 FBXO41Q8TF61 875 aa12.91□□□□□ -0.34
LMO7-208ENST00000465309 MSH5O43196 834 aa12.89□□□□□ -0.35
LMO7-208ENST00000465309 MROH2BQ7Z745 1585 aa12.88□□□□□ -0.35
LMO7-208ENST00000465309 HECW2Q9P2P5 1572 aa12.86□□□□□ -0.35
LMO7-208ENST00000465309 CLASP1Q7Z460 1538 aa12.85□□□□□ -0.35
LMO7-208ENST00000465309 KIF13AQ9H1H9 1805 aa12.84□□□□□ -0.35
LMO7-208ENST00000465309 AQRO60306 1485 aaKnown RBP eCLIP12.84□□□□□ -0.356e-8■□□□□ 9.3
LMO7-208ENST00000465309 SOCS7O14512 581 aa12.83□□□□□ -0.36
LMO7-208ENST00000465309 CFTRP13569 1480 aa12.83□□□□□ -0.36
LMO7-208ENST00000465309 GAPVD1Q14C86 1478 aa12.83□□□□□ -0.36
LMO7-208ENST00000465309 PPP6R1Q9UPN7 881 aa12.79□□□□□ -0.36
LMO7-208ENST00000465309 SYNJ1O43426 1573 aa12.78□□□□□ -0.36
LMO7-208ENST00000465309 ILDR2Q71H61 639 aa12.77□□□□□ -0.37
LMO7-208ENST00000465309 TOPBP1Q92547 1522 aa12.74□□□□□ -0.37
LMO7-208ENST00000465309 KDM6BO15054 1643 aa12.73□□□□□ -0.37
LMO7-208ENST00000465309 ADRA2BP18089 450 aa12.73□□□□□ -0.37
LMO7-208ENST00000465309 WIZO95785 1651 aa12.72□□□□□ -0.37
LMO7-208ENST00000465309 PRDM2Q13029 1718 aa12.71□□□□□ -0.37
LMO7-208ENST00000465309 CHMP7Q8WUX9 453 aaPredicted RBP12.7□□□□□ -0.38
LMO7-208ENST00000465309 ADGRL1O94910 1474 aa12.7□□□□□ -0.38
LMO7-208ENST00000465309 TARBP1Q13395 1621 aaKnown RBP12.7□□□□□ -0.38
LMO7-208ENST00000465309 SNAPC4Q5SXM2 1469 aa12.69□□□□□ -0.38
LMO7-208ENST00000465309 DISP3Q9P2K9 1392 aa12.69□□□□□ -0.38
LMO7-208ENST00000465309 SYNJ2O15056 1496 aa12.68□□□□□ -0.38
LMO7-208ENST00000465309 PIAS4Q8N2W9 510 aaPredicted RBP12.66□□□□□ -0.38
LMO7-208ENST00000465309 FAM69CQ0P6D2 419 aa12.64□□□□□ -0.39
LMO7-208ENST00000465309 TSPOAP1O95153 1857 aa12.61□□□□□ -0.39
LMO7-208ENST00000465309 DNMBPQ6XZF7 1577 aa12.6□□□□□ -0.39
LMO7-208ENST00000465309 TDRD9Q8NDG6 1382 aaKnown RBP12.6□□□□□ -0.39
LMO7-208ENST00000465309 ABCC8Q09428 1581 aa12.58□□□□□ -0.4
LMO7-208ENST00000465309 MAGI1Q96QZ7 1491 aaPredicted RBP12.56□□□□□ -0.4
LMO7-208ENST00000465309 ABCC10Q5T3U5 1492 aa12.55□□□□□ -0.4
LMO7-208ENST00000465309 RAD54L2Q9Y4B4 1467 aa12.55□□□□□ -0.4
LMO7-208ENST00000465309 POLA1P09884 1462 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms