RNA–Protein interactions for RNA: ENST00000526212.2

SSR2-214, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 5

Gene SSR2, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-214ENST00000526212 NISCHQ9Y2I1 1504 aa20.22■□□□□ 0.83
SSR2-214ENST00000526212 CCDC180Q9P1Z9 1646 aa18.19■□□□□ 0.5
SSR2-214ENST00000526212 ABCC9O60706 1549 aa18.03■□□□□ 0.48
SSR2-214ENST00000526212 RB1CC1Q8TDY2 1594 aa17.22■□□□□ 0.35
SSR2-214ENST00000526212 NACADO15069 1562 aa17.11■□□□□ 0.33
SSR2-214ENST00000526212 DCAF8L2P0C7V8 631 aa16.95■□□□□ 0.3
SSR2-214ENST00000526212 UNC13AQ9UPW8 1703 aa16.92■□□□□ 0.3
SSR2-214ENST00000526212 MYO15BQ96JP2 1530 aa16.89■□□□□ 0.29
SSR2-214ENST00000526212 ZCCHC6Q5VYS8 1495 aaKnown RBP16.8■□□□□ 0.28
SSR2-214ENST00000526212 DNAJC5BQ9UF47 199 aa16.76■□□□□ 0.27
SSR2-214ENST00000526212 PABPN1Q86U42 306 aaKnown RBP eCLIP16.74■□□□□ 0.27
SSR2-214ENST00000526212 BICRAQ9NZM4 1560 aa16.72■□□□□ 0.27
SSR2-214ENST00000526212 DCAF1Q9Y4B6 1507 aa16.72■□□□□ 0.27
SSR2-214ENST00000526212 SCRIBQ14160 1630 aa16.56■□□□□ 0.24
SSR2-214ENST00000526212 SHROOM4Q9ULL8 1493 aa16.48■□□□□ 0.23
SSR2-214ENST00000526212 CC2D2AQ9P2K1 1620 aa16.32■□□□□ 0.2
SSR2-214ENST00000526212 EIF4G1Q04637 1599 aaKnown RBP16.3■□□□□ 0.2
SSR2-214ENST00000526212 CECR2Q9BXF3 1484 aa16.22■□□□□ 0.19
SSR2-214ENST00000526212 SMARCA4P51532 1647 aa15.8■□□□□ 0.12
SSR2-214ENST00000526212 NCAPD3P42695 1498 aa15.76■□□□□ 0.11
SSR2-214ENST00000526212 ATAD2BQ9ULI0 1458 aa15.74■□□□□ 0.11
SSR2-214ENST00000526212 SMARCA2P51531 1590 aa15.72■□□□□ 0.11
SSR2-214ENST00000526212 BAZ1AQ9NRL2 1556 aaPredicted RBP15.71■□□□□ 0.11
SSR2-214ENST00000526212 HMGXB3Q12766 1538 aa15.7■□□□□ 0.1
SSR2-214ENST00000526212 PEG3Q9GZU2 1588 aa15.63■□□□□ 0.09
SSR2-214ENST00000526212 BAZ1BQ9UIG0 1483 aaKnown RBP15.61■□□□□ 0.09
SSR2-214ENST00000526212 MROH2BQ7Z745 1585 aa15.59■□□□□ 0.09
SSR2-214ENST00000526212 ERCC6Q03468 1493 aa15.55■□□□□ 0.08
SSR2-214ENST00000526212 NESP48681 1621 aa15.52■□□□□ 0.08
SSR2-214ENST00000526212 CUX2O14529 1486 aa15.49■□□□□ 0.07
SSR2-214ENST00000526212 WIZO95785 1651 aa15.45■□□□□ 0.06
SSR2-214ENST00000526212 LAMC3Q9Y6N6 1575 aa15.45■□□□□ 0.06
SSR2-214ENST00000526212 THOC2Q8NI27 1593 aaKnown RBP15.4■□□□□ 0.06
SSR2-214ENST00000526212 KIF21AQ7Z4S6 1674 aa15.39■□□□□ 0.05
SSR2-214ENST00000526212 DNAJC5Q9H3Z4 198 aa15.31■□□□□ 0.04
SSR2-214ENST00000526212 PDS5BQ9NTI5 1447 aa15.29■□□□□ 0.04
SSR2-214ENST00000526212 CADPSQ9ULU8 1353 aa15.27■□□□□ 0.04
SSR2-214ENST00000526212 RSF1Q96T23 1441 aaPredicted RBP15.26■□□□□ 0.03
SSR2-214ENST00000526212 TOP2AP11388 1531 aaKnown RBP15.24■□□□□ 0.03
SSR2-214ENST00000526212 MRC2Q9UBG0 1479 aa15.19■□□□□ 0.02
SSR2-214ENST00000526212 WDR62O43379 1518 aa15.18■□□□□ 0.02
SSR2-214ENST00000526212 CEP164Q9UPV0 1460 aa15.15■□□□□ 0.02
SSR2-214ENST00000526212 CFTRP13569 1480 aa15.14■□□□□ 0.01
SSR2-214ENST00000526212 FANCD2Q9BXW9 1451 aa15.14■□□□□ 0.01
SSR2-214ENST00000526212 PRDM2Q13029 1718 aa15.12■□□□□ 0.01
SSR2-214ENST00000526212 CCDC88BA6NC98 1476 aa15.03■□□□□ -0
SSR2-214ENST00000526212 URB2Q14146 1524 aaKnown RBP15.02□□□□□ -0.01
SSR2-214ENST00000526212 TOPBP1Q92547 1522 aa14.87□□□□□ -0.03
SSR2-214ENST00000526212 DNMBPQ6XZF7 1577 aa14.85□□□□□ -0.03
SSR2-214ENST00000526212 IFT140Q96RY7 1462 aa14.82□□□□□ -0.04
SSR2-214ENST00000526212 ABCC8Q09428 1581 aa14.81□□□□□ -0.04
SSR2-214ENST00000526212 ZNF608Q9ULD9 1512 aaPredicted RBP14.81□□□□□ -0.04
SSR2-214ENST00000526212 EIF4G3O43432 1585 aaKnown RBP14.79□□□□□ -0.04
SSR2-214ENST00000526212 TARBP1Q13395 1621 aaKnown RBP14.76□□□□□ -0.05
SSR2-214ENST00000526212 POLA1P09884 1462 aaPredicted RBP14.72□□□□□ -0.05
SSR2-214ENST00000526212 OSCARQ8IYS5 282 aa14.72□□□□□ -0.05
SSR2-214ENST00000526212 TRIM41Q8WV44 630 aa14.7□□□□□ -0.06
SSR2-214ENST00000526212 CHD1O14646 1710 aa14.68□□□□□ -0.06
SSR2-214ENST00000526212 AQRO60306 1485 aaKnown RBP eCLIP14.66□□□□□ -0.06
SSR2-214ENST00000526212 CUX1P39880 1505 aa14.66□□□□□ -0.06
SSR2-214ENST00000526212 FGD5Q6ZNL6 1462 aa14.65□□□□□ -0.06
SSR2-214ENST00000526212 RAD54L2Q9Y4B4 1467 aa14.65□□□□□ -0.06
SSR2-214ENST00000526212 RIMBP3CA6NJZ7 1639 aa14.65□□□□□ -0.06
SSR2-214ENST00000526212 RIMBP3BA6NNM3 1639 aa14.65□□□□□ -0.06
SSR2-214ENST00000526212 RIMBP3Q9UFD9 1639 aa14.65□□□□□ -0.06
SSR2-214ENST00000526212 SUPT5HO00267 1087 aaKnown RBP14.62□□□□□ -0.07
SSR2-214ENST00000526212 WDR97A6NE52 1622 aa14.62□□□□□ -0.07
SSR2-214ENST00000526212 SOGA1O94964 1423 aa14.61□□□□□ -0.07
SSR2-214ENST00000526212 ARHGEF11O15085 1522 aa14.58□□□□□ -0.08
SSR2-214ENST00000526212 TDRD9Q8NDG6 1382 aaKnown RBP14.57□□□□□ -0.08
SSR2-214ENST00000526212 PBRM1Q86U86 1689 aa14.55□□□□□ -0.08
SSR2-214ENST00000526212 SNAPC4Q5SXM2 1469 aa14.55□□□□□ -0.08
SSR2-214ENST00000526212 FBLN2P98095 1184 aa14.51□□□□□ -0.09
SSR2-214ENST00000526212 MAGI1Q96QZ7 1491 aaPredicted RBP14.5□□□□□ -0.09
SSR2-214ENST00000526212 ABCA5Q8WWZ7 1642 aa14.5□□□□□ -0.09
SSR2-214ENST00000526212 GRIN2BQ13224 1484 aa14.5□□□□□ -0.09
SSR2-214ENST00000526212 BIVM-ERCC5R4GMW8 1640 aa14.48□□□□□ -0.09
SSR2-214ENST00000526212 CLASP1Q7Z460 1538 aa14.47□□□□□ -0.09
SSR2-214ENST00000526212 ABCA10Q8WWZ4 1543 aa14.47□□□□□ -0.09
SSR2-214ENST00000526212 SYNJ1O43426 1573 aa14.47□□□□□ -0.09
SSR2-214ENST00000526212 GAPVD1Q14C86 1478 aa14.46□□□□□ -0.09
SSR2-214ENST00000526212 TOP2BQ02880 1626 aa14.46□□□□□ -0.09
SSR2-214ENST00000526212 SYNJ2O15056 1496 aa14.45□□□□□ -0.1
SSR2-214ENST00000526212 ARAP1Q96P48 1450 aa14.44□□□□□ -0.1
SSR2-214ENST00000526212 WRNQ14191 1432 aaPredicted RBP eCLIP14.41□□□□□ -0.1
SSR2-214ENST00000526212 CHMP7Q8WUX9 453 aaPredicted RBP14.41□□□□□ -0.1
SSR2-214ENST00000526212 ADAMTS12P58397 1594 aa14.39□□□□□ -0.11
SSR2-214ENST00000526212 CYB5RLQ6IPT4 315 aa14.38□□□□□ -0.11
SSR2-214ENST00000526212 GRIN2AQ12879 1464 aa14.33□□□□□ -0.12
SSR2-214ENST00000526212 CEP170Q5SW79 1584 aa14.31□□□□□ -0.12
SSR2-214ENST00000526212 ERICH3Q5RHP9 1530 aa14.31□□□□□ -0.12
SSR2-214ENST00000526212 FHAD1B1AJZ9 1412 aa14.27□□□□□ -0.12
SSR2-214ENST00000526212 NUP160Q12769 1436 aa14.26□□□□□ -0.13
SSR2-214ENST00000526212 ERCC6L2Q5T890 1561 aa14.26□□□□□ -0.13
SSR2-214ENST00000526212 SHROOM2Q13796 1616 aa14.25□□□□□ -0.13
SSR2-214ENST00000526212 TRHP20396 242 aaPredicted RBP14.2□□□□□ -0.14
SSR2-214ENST00000526212 RUSC2Q8N2Y8 1516 aa14.19□□□□□ -0.14
SSR2-214ENST00000526212 CUL7Q14999 1698 aa14.16□□□□□ -0.14
SSR2-214ENST00000526212 KIF27Q86VH2 1401 aa14.12□□□□□ -0.15
SSR2-214ENST00000526212 PRG4Q92954 1404 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms