RNA–Protein interactions for RNA: ENST00000528098.5

SLC43A3-209, Transcript of solute carrier family 43 member 3, humanhuman

TSL 2

Gene SLC43A3, Length 1,260 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A3-209ENST00000528098 NISCHQ9Y2I1 1504 aa36.34■■■■□ 3.41
SLC43A3-209ENST00000528098 ABCC9O60706 1549 aa32.62■■■□□ 2.81
SLC43A3-209ENST00000528098 CCDC180Q9P1Z9 1646 aa32.59■■■□□ 2.81
SLC43A3-209ENST00000528098 RB1CC1Q8TDY2 1594 aa31.09■■■□□ 2.57
SLC43A3-209ENST00000528098 NACADO15069 1562 aa30.87■■■□□ 2.53
SLC43A3-209ENST00000528098 DCAF8L2P0C7V8 631 aa30.84■■■□□ 2.53
SLC43A3-209ENST00000528098 DNAJC5BQ9UF47 199 aa30.48■■■□□ 2.47
SLC43A3-209ENST00000528098 MYO15BQ96JP2 1530 aa30.42■■■□□ 2.46
SLC43A3-209ENST00000528098 PABPN1Q86U42 306 aaKnown RBP eCLIP30.39■■■□□ 2.46
SLC43A3-209ENST00000528098 UNC13AQ9UPW8 1703 aa30.19■■■□□ 2.42
SLC43A3-209ENST00000528098 ZCCHC6Q5VYS8 1495 aaKnown RBP30.11■■■□□ 2.41
SLC43A3-209ENST00000528098 BICRAQ9NZM4 1560 aa30.03■■■□□ 2.4
SLC43A3-209ENST00000528098 DCAF1Q9Y4B6 1507 aa30.03■■■□□ 2.4
SLC43A3-209ENST00000528098 SHROOM4Q9ULL8 1493 aa29.8■■■□□ 2.36
SLC43A3-209ENST00000528098 SCRIBQ14160 1630 aa29.71■■■□□ 2.35
SLC43A3-209ENST00000528098 CC2D2AQ9P2K1 1620 aa29.43■■■□□ 2.3
SLC43A3-209ENST00000528098 CECR2Q9BXF3 1484 aa29.42■■■□□ 2.3
SLC43A3-209ENST00000528098 EIF4G1Q04637 1599 aaKnown RBP29.39■■■□□ 2.29
SLC43A3-209ENST00000528098 NCAPD3P42695 1498 aa28.47■■■□□ 2.15
SLC43A3-209ENST00000528098 ATAD2BQ9ULI0 1458 aa28.38■■■□□ 2.13
SLC43A3-209ENST00000528098 SMARCA2P51531 1590 aa28.37■■■□□ 2.13
SLC43A3-209ENST00000528098 SMARCA4P51532 1647 aa28.33■■■□□ 2.13
SLC43A3-209ENST00000528098 ERCC6Q03468 1493 aa28.28■■■□□ 2.12
SLC43A3-209ENST00000528098 HMGXB3Q12766 1538 aa28.27■■■□□ 2.12
SLC43A3-209ENST00000528098 BAZ1AQ9NRL2 1556 aaPredicted RBP28.26■■■□□ 2.11
SLC43A3-209ENST00000528098 BAZ1BQ9UIG0 1483 aaKnown RBP28.17■■■□□ 2.1
SLC43A3-209ENST00000528098 CUX2O14529 1486 aa28.16■■■□□ 2.1
SLC43A3-209ENST00000528098 DNAJC5Q9H3Z4 198 aa28.11■■■□□ 2.09
SLC43A3-209ENST00000528098 PEG3Q9GZU2 1588 aa28.04■■■□□ 2.08
SLC43A3-209ENST00000528098 NESP48681 1621 aa27.96■■■□□ 2.07
SLC43A3-209ENST00000528098 MROH2BQ7Z745 1585 aa27.96■■■□□ 2.07
SLC43A3-209ENST00000528098 LAMC3Q9Y6N6 1575 aa27.86■■■□□ 2.05
SLC43A3-209ENST00000528098 PDS5BQ9NTI5 1447 aa27.77■■■□□ 2.04
SLC43A3-209ENST00000528098 THOC2Q8NI27 1593 aaKnown RBP27.67■■■□□ 2.02
SLC43A3-209ENST00000528098 CADPSQ9ULU8 1353 aa27.64■■■□□ 2.02
SLC43A3-209ENST00000528098 WIZO95785 1651 aa27.61■■■□□ 2.01
SLC43A3-209ENST00000528098 KIF21AQ7Z4S6 1674 aa27.59■■■□□ 2.01
SLC43A3-209ENST00000528098 MRC2Q9UBG0 1479 aa27.46■■□□□ 1.99
SLC43A3-209ENST00000528098 RSF1Q96T23 1441 aaPredicted RBP27.41■■□□□ 1.98
SLC43A3-209ENST00000528098 CEP164Q9UPV0 1460 aa27.38■■□□□ 1.97
SLC43A3-209ENST00000528098 WDR62O43379 1518 aa27.35■■□□□ 1.97
SLC43A3-209ENST00000528098 TOP2AP11388 1531 aaKnown RBP27.33■■□□□ 1.97
SLC43A3-209ENST00000528098 FANCD2Q9BXW9 1451 aa27.32■■□□□ 1.96
SLC43A3-209ENST00000528098 CFTRP13569 1480 aa27.3■■□□□ 1.96
SLC43A3-209ENST00000528098 URB2Q14146 1524 aaKnown RBP27.03■■□□□ 1.92
SLC43A3-209ENST00000528098 CCDC88BA6NC98 1476 aa27■■□□□ 1.91
SLC43A3-209ENST00000528098 TRIM41Q8WV44 630 aa26.96■■□□□ 1.91
SLC43A3-209ENST00000528098 PRDM2Q13029 1718 aa26.96■■□□□ 1.91
SLC43A3-209ENST00000528098 OSCARQ8IYS5 282 aa26.93■■□□□ 1.9
SLC43A3-209ENST00000528098 IFT140Q96RY7 1462 aa26.84■■□□□ 1.89
SLC43A3-209ENST00000528098 ABCC8Q09428 1581 aa26.82■■□□□ 1.88
SLC43A3-209ENST00000528098 TOPBP1Q92547 1522 aa26.78■■□□□ 1.88
SLC43A3-209ENST00000528098 ZNF608Q9ULD9 1512 aaPredicted RBP26.7■■□□□ 1.86
SLC43A3-209ENST00000528098 DNMBPQ6XZF7 1577 aa26.69■■□□□ 1.86
SLC43A3-209ENST00000528098 EIF4G3O43432 1585 aaKnown RBP26.57■■□□□ 1.84
SLC43A3-209ENST00000528098 POLA1P09884 1462 aaPredicted RBP26.5■■□□□ 1.83
SLC43A3-209ENST00000528098 AQRO60306 1485 aaKnown RBP eCLIP26.49■■□□□ 1.832e-8■■■■■ 36.9
SLC43A3-209ENST00000528098 TARBP1Q13395 1621 aaKnown RBP26.48■■□□□ 1.83
SLC43A3-209ENST00000528098 FBLN2P98095 1184 aa26.46■■□□□ 1.83
SLC43A3-209ENST00000528098 RIMBP3CA6NJZ7 1639 aa26.44■■□□□ 1.82
SLC43A3-209ENST00000528098 RIMBP3BA6NNM3 1639 aa26.44■■□□□ 1.82
SLC43A3-209ENST00000528098 RIMBP3Q9UFD9 1639 aa26.44■■□□□ 1.82
SLC43A3-209ENST00000528098 SOGA1O94964 1423 aa26.44■■□□□ 1.82
SLC43A3-209ENST00000528098 ARHGEF11O15085 1522 aa26.4■■□□□ 1.82
SLC43A3-209ENST00000528098 RAD54L2Q9Y4B4 1467 aa26.39■■□□□ 1.82
SLC43A3-209ENST00000528098 TDRD9Q8NDG6 1382 aaKnown RBP26.36■■□□□ 1.81
SLC43A3-209ENST00000528098 FGD5Q6ZNL6 1462 aa26.35■■□□□ 1.81
SLC43A3-209ENST00000528098 SUPT5HO00267 1087 aaKnown RBP26.34■■□□□ 1.81
SLC43A3-209ENST00000528098 CHD1O14646 1710 aa26.33■■□□□ 1.81
SLC43A3-209ENST00000528098 WDR97A6NE52 1622 aa26.32■■□□□ 1.8
SLC43A3-209ENST00000528098 CYB5RLQ6IPT4 315 aa26.29■■□□□ 1.8
SLC43A3-209ENST00000528098 CUX1P39880 1505 aa26.28■■□□□ 1.8
SLC43A3-209ENST00000528098 CHMP7Q8WUX9 453 aaPredicted RBP26.27■■□□□ 1.8
SLC43A3-209ENST00000528098 SNAPC4Q5SXM2 1469 aa26.24■■□□□ 1.79
SLC43A3-209ENST00000528098 GRIN2BQ13224 1484 aa26.22■■□□□ 1.79
SLC43A3-209ENST00000528098 MAGI1Q96QZ7 1491 aaPredicted RBP26.21■■□□□ 1.79
SLC43A3-209ENST00000528098 SYNJ1O43426 1573 aa26.14■■□□□ 1.78
SLC43A3-209ENST00000528098 SYNJ2O15056 1496 aa26.11■■□□□ 1.77
SLC43A3-209ENST00000528098 GAPVD1Q14C86 1478 aa26.11■■□□□ 1.77
SLC43A3-209ENST00000528098 ARAP1Q96P48 1450 aa26.11■■□□□ 1.77
SLC43A3-209ENST00000528098 TRHP20396 242 aaPredicted RBP26.08■■□□□ 1.77
SLC43A3-209ENST00000528098 ABCA10Q8WWZ4 1543 aa26.06■■□□□ 1.76
SLC43A3-209ENST00000528098 CLASP1Q7Z460 1538 aa26.04■■□□□ 1.76
SLC43A3-209ENST00000528098 WRNQ14191 1432 aaPredicted RBP eCLIP26.03■■□□□ 1.76
SLC43A3-209ENST00000528098 PBRM1Q86U86 1689 aa26.02■■□□□ 1.76
SLC43A3-209ENST00000528098 ABCA5Q8WWZ7 1642 aa25.96■■□□□ 1.75
SLC43A3-209ENST00000528098 TOP2BQ02880 1626 aa25.89■■□□□ 1.74
SLC43A3-209ENST00000528098 BIVM-ERCC5R4GMW8 1640 aa25.86■■□□□ 1.73
SLC43A3-209ENST00000528098 GRIN2AQ12879 1464 aa25.85■■□□□ 1.73
SLC43A3-209ENST00000528098 FHAD1B1AJZ9 1412 aa25.8■■□□□ 1.72
SLC43A3-209ENST00000528098 ADAMTS12P58397 1594 aa25.79■■□□□ 1.72
SLC43A3-209ENST00000528098 ERICH3Q5RHP9 1530 aa25.75■■□□□ 1.71
SLC43A3-209ENST00000528098 NUP160Q12769 1436 aa25.73■■□□□ 1.71
SLC43A3-209ENST00000528098 CEP170Q5SW79 1584 aa25.69■■□□□ 1.7
SLC43A3-209ENST00000528098 ERCC6L2Q5T890 1561 aa25.59■■□□□ 1.69
SLC43A3-209ENST00000528098 SHROOM2Q13796 1616 aa25.56■■□□□ 1.68
SLC43A3-209ENST00000528098 JPH4Q96JJ6 628 aa25.55■■□□□ 1.68
SLC43A3-209ENST00000528098 PRG4Q92954 1404 aaPredicted RBP25.54■■□□□ 1.68
SLC43A3-209ENST00000528098 KIF27Q86VH2 1401 aa25.49■■□□□ 1.67
SLC43A3-209ENST00000528098 NPM1P06748 294 aaKnown RBP eCLIP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms