RNA–Protein interactions for RNA: ENST00000599221.1

AC003006.1-201, humanhuman

TSL 3

Gene AC003006.1, Length 421 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003006.1-201ENST00000599221 NISCHQ9Y2I1 1504 aa34.75■■■■□ 3.15
AC003006.1-201ENST00000599221 ABCC9O60706 1549 aa31.73■■■□□ 2.67
AC003006.1-201ENST00000599221 CCDC180Q9P1Z9 1646 aa31.25■■■□□ 2.59
AC003006.1-201ENST00000599221 DNAJC5BQ9UF47 199 aa30.24■■■□□ 2.43
AC003006.1-201ENST00000599221 RB1CC1Q8TDY2 1594 aa29.98■■■□□ 2.39
AC003006.1-201ENST00000599221 NACADO15069 1562 aa29.69■■■□□ 2.34
AC003006.1-201ENST00000599221 DCAF8L2P0C7V8 631 aa29.6■■■□□ 2.33
AC003006.1-201ENST00000599221 PABPN1Q86U42 306 aaKnown RBP eCLIP29.56■■■□□ 2.32
AC003006.1-201ENST00000599221 UNC13AQ9UPW8 1703 aa29.28■■■□□ 2.28
AC003006.1-201ENST00000599221 MYO15BQ96JP2 1530 aa29.17■■■□□ 2.26
AC003006.1-201ENST00000599221 BICRAQ9NZM4 1560 aa29.16■■■□□ 2.26
AC003006.1-201ENST00000599221 ZCCHC6Q5VYS8 1495 aaKnown RBP28.68■■■□□ 2.18
AC003006.1-201ENST00000599221 SHROOM4Q9ULL8 1493 aa28.66■■■□□ 2.18
AC003006.1-201ENST00000599221 DCAF1Q9Y4B6 1507 aa28.65■■■□□ 2.18
AC003006.1-201ENST00000599221 CECR2Q9BXF3 1484 aa28.62■■■□□ 2.17
AC003006.1-201ENST00000599221 CC2D2AQ9P2K1 1620 aa28.61■■■□□ 2.17
AC003006.1-201ENST00000599221 SCRIBQ14160 1630 aa28.49■■■□□ 2.15
AC003006.1-201ENST00000599221 EIF4G1Q04637 1599 aaKnown RBP28.45■■■□□ 2.14
AC003006.1-201ENST00000599221 DNAJC5Q9H3Z4 198 aa28.02■■■□□ 2.08
AC003006.1-201ENST00000599221 NCAPD3P42695 1498 aa27.48■■□□□ 1.99
AC003006.1-201ENST00000599221 CUX2O14529 1486 aa27.46■■□□□ 1.99
AC003006.1-201ENST00000599221 ERCC6Q03468 1493 aa27.38■■□□□ 1.97
AC003006.1-201ENST00000599221 ATAD2BQ9ULI0 1458 aa27.32■■□□□ 1.96
AC003006.1-201ENST00000599221 SMARCA2P51531 1590 aa27.18■■□□□ 1.94
AC003006.1-201ENST00000599221 NESP48681 1621 aa27.16■■□□□ 1.94
AC003006.1-201ENST00000599221 HMGXB3Q12766 1538 aa27.16■■□□□ 1.94
AC003006.1-201ENST00000599221 SMARCA4P51532 1647 aa27.14■■□□□ 1.94
AC003006.1-201ENST00000599221 BAZ1BQ9UIG0 1483 aaKnown RBP27■■□□□ 1.91
AC003006.1-201ENST00000599221 BAZ1AQ9NRL2 1556 aaPredicted RBP26.96■■□□□ 1.91
AC003006.1-201ENST00000599221 PEG3Q9GZU2 1588 aa26.89■■□□□ 1.9
AC003006.1-201ENST00000599221 THOC2Q8NI27 1593 aaKnown RBP26.88■■□□□ 1.89
AC003006.1-201ENST00000599221 LAMC3Q9Y6N6 1575 aa26.84■■□□□ 1.89
AC003006.1-201ENST00000599221 MROH2BQ7Z745 1585 aa26.78■■□□□ 1.88
AC003006.1-201ENST00000599221 PDS5BQ9NTI5 1447 aa26.75■■□□□ 1.87
AC003006.1-201ENST00000599221 KIF21AQ7Z4S6 1674 aa26.72■■□□□ 1.87
AC003006.1-201ENST00000599221 CADPSQ9ULU8 1353 aa26.63■■□□□ 1.85
AC003006.1-201ENST00000599221 TRIM41Q8WV44 630 aa26.58■■□□□ 1.85
AC003006.1-201ENST00000599221 MRC2Q9UBG0 1479 aa26.52■■□□□ 1.84
AC003006.1-201ENST00000599221 WDR62O43379 1518 aa26.44■■□□□ 1.82
AC003006.1-201ENST00000599221 WIZO95785 1651 aa26.41■■□□□ 1.82
AC003006.1-201ENST00000599221 CEP164Q9UPV0 1460 aa26.32■■□□□ 1.8
AC003006.1-201ENST00000599221 FANCD2Q9BXW9 1451 aa26.29■■□□□ 1.8
AC003006.1-201ENST00000599221 OSCARQ8IYS5 282 aa26.26■■□□□ 1.79
AC003006.1-201ENST00000599221 CFTRP13569 1480 aa26.23■■□□□ 1.79
AC003006.1-201ENST00000599221 RSF1Q96T23 1441 aaPredicted RBP26.12■■□□□ 1.77
AC003006.1-201ENST00000599221 URB2Q14146 1524 aaKnown RBP26.11■■□□□ 1.77
AC003006.1-201ENST00000599221 TOP2AP11388 1531 aaKnown RBP26.03■■□□□ 1.76
AC003006.1-201ENST00000599221 ZNF608Q9ULD9 1512 aaPredicted RBP25.87■■□□□ 1.73
AC003006.1-201ENST00000599221 RIMBP3CA6NJZ7 1639 aa25.85■■□□□ 1.73
AC003006.1-201ENST00000599221 RIMBP3BA6NNM3 1639 aa25.85■■□□□ 1.73
AC003006.1-201ENST00000599221 RIMBP3Q9UFD9 1639 aa25.85■■□□□ 1.73
AC003006.1-201ENST00000599221 IFT140Q96RY7 1462 aa25.84■■□□□ 1.73
AC003006.1-201ENST00000599221 CCDC88BA6NC98 1476 aa25.82■■□□□ 1.72
AC003006.1-201ENST00000599221 PRDM2Q13029 1718 aa25.8■■□□□ 1.72
AC003006.1-201ENST00000599221 TOPBP1Q92547 1522 aa25.75■■□□□ 1.71
AC003006.1-201ENST00000599221 ARHGEF11O15085 1522 aa25.73■■□□□ 1.71
AC003006.1-201ENST00000599221 ABCC8Q09428 1581 aa25.67■■□□□ 1.7
AC003006.1-201ENST00000599221 CYB5RLQ6IPT4 315 aa25.67■■□□□ 1.7
AC003006.1-201ENST00000599221 EIF4G3O43432 1585 aaKnown RBP25.61■■□□□ 1.69
AC003006.1-201ENST00000599221 AQRO60306 1485 aaKnown RBP eCLIP25.6■■□□□ 1.69
AC003006.1-201ENST00000599221 DNMBPQ6XZF7 1577 aa25.58■■□□□ 1.69
AC003006.1-201ENST00000599221 TARBP1Q13395 1621 aaKnown RBP25.53■■□□□ 1.68
AC003006.1-201ENST00000599221 FBLN2P98095 1184 aa25.53■■□□□ 1.68
AC003006.1-201ENST00000599221 CHD1O14646 1710 aa25.5■■□□□ 1.67
AC003006.1-201ENST00000599221 TRHP20396 242 aaPredicted RBP25.48■■□□□ 1.67
AC003006.1-201ENST00000599221 ARAP1Q96P48 1450 aa25.47■■□□□ 1.67
AC003006.1-201ENST00000599221 POLA1P09884 1462 aaPredicted RBP25.46■■□□□ 1.67
AC003006.1-201ENST00000599221 RAD54L2Q9Y4B4 1467 aa25.41■■□□□ 1.66
AC003006.1-201ENST00000599221 TDRD9Q8NDG6 1382 aaKnown RBP25.41■■□□□ 1.66
AC003006.1-201ENST00000599221 SOGA1O94964 1423 aa25.38■■□□□ 1.65
AC003006.1-201ENST00000599221 CHMP7Q8WUX9 453 aaPredicted RBP25.28■■□□□ 1.64
AC003006.1-201ENST00000599221 SNAPC4Q5SXM2 1469 aa25.27■■□□□ 1.64
AC003006.1-201ENST00000599221 FGD5Q6ZNL6 1462 aa25.24■■□□□ 1.63
AC003006.1-201ENST00000599221 CLASP1Q7Z460 1538 aa25.23■■□□□ 1.63
AC003006.1-201ENST00000599221 WDR97A6NE52 1622 aa25.19■■□□□ 1.62
AC003006.1-201ENST00000599221 MAGI1Q96QZ7 1491 aaPredicted RBP25.18■■□□□ 1.62
AC003006.1-201ENST00000599221 CUX1P39880 1505 aa25.17■■□□□ 1.62
AC003006.1-201ENST00000599221 GRIN2BQ13224 1484 aa25.16■■□□□ 1.62
AC003006.1-201ENST00000599221 SYNJ1O43426 1573 aa25.16■■□□□ 1.62
AC003006.1-201ENST00000599221 SYNJ2O15056 1496 aa25.12■■□□□ 1.61
AC003006.1-201ENST00000599221 GAPVD1Q14C86 1478 aa25.03■■□□□ 1.6
AC003006.1-201ENST00000599221 AEBP2Q6ZN18 517 aaPredicted RBP25.01■■□□□ 1.59
AC003006.1-201ENST00000599221 PBRM1Q86U86 1689 aa24.96■■□□□ 1.59
AC003006.1-201ENST00000599221 ABCA10Q8WWZ4 1543 aa24.94■■□□□ 1.58
AC003006.1-201ENST00000599221 ABCA5Q8WWZ7 1642 aa24.89■■□□□ 1.57
AC003006.1-201ENST00000599221 ERCC6L2Q5T890 1561 aa24.84■■□□□ 1.57
AC003006.1-201ENST00000599221 GRIN2AQ12879 1464 aa24.83■■□□□ 1.56
AC003006.1-201ENST00000599221 WRNQ14191 1432 aaPredicted RBP eCLIP24.78■■□□□ 1.56
AC003006.1-201ENST00000599221 NUP160Q12769 1436 aa24.78■■□□□ 1.56
AC003006.1-201ENST00000599221 CEP170Q5SW79 1584 aa24.76■■□□□ 1.55
AC003006.1-201ENST00000599221 SUPT5HO00267 1087 aaKnown RBP24.73■■□□□ 1.55
AC003006.1-201ENST00000599221 ADAMTS12P58397 1594 aa24.71■■□□□ 1.55
AC003006.1-201ENST00000599221 FHAD1B1AJZ9 1412 aa24.7■■□□□ 1.55
AC003006.1-201ENST00000599221 SHROOM2Q13796 1616 aa24.68■■□□□ 1.54
AC003006.1-201ENST00000599221 TOP2BQ02880 1626 aa24.63■■□□□ 1.53
AC003006.1-201ENST00000599221 BIVM-ERCC5R4GMW8 1640 aa24.61■■□□□ 1.53
AC003006.1-201ENST00000599221 JPH4Q96JJ6 628 aa24.61■■□□□ 1.53
AC003006.1-201ENST00000599221 ERICH3Q5RHP9 1530 aa24.6■■□□□ 1.53
AC003006.1-201ENST00000599221 PRG4Q92954 1404 aaPredicted RBP24.6■■□□□ 1.53
AC003006.1-201ENST00000599221 KIF13AQ9H1H9 1805 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms