RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 NISCHQ9Y2I1 1504 aa22.44■■□□□ 1.18
RIOK3-201ENST00000339486 SUPT5HO00267 1087 aaKnown RBP21.06■□□□□ 0.96
RIOK3-201ENST00000339486 SHROOM4Q9ULL8 1493 aa20.92■□□□□ 0.94
RIOK3-201ENST00000339486 DCAF8L2P0C7V8 631 aa20.86■□□□□ 0.93
RIOK3-201ENST00000339486 PCGF6Q9BYE7 350 aa20.38■□□□□ 0.85
RIOK3-201ENST00000339486 HRCP23327 699 aa20.09■□□□□ 0.81
RIOK3-201ENST00000339486 EHMT2Q96KQ7 1210 aa19.88■□□□□ 0.77
RIOK3-201ENST00000339486 PPARGC1BQ86YN6 1023 aaKnown RBP19.82■□□□□ 0.76
RIOK3-201ENST00000339486 CHIC1Q5VXU3 224 aa19.81■□□□□ 0.76
RIOK3-201ENST00000339486 FAM9AQ8IZU1 332 aaPredicted RBP19.67■□□□□ 0.74
RIOK3-201ENST00000339486 LOC105371045A0A1W2PR82 267 aa19.62■□□□□ 0.73
RIOK3-201ENST00000339486 ZEB1P37275 1124 aaPredicted RBP19.55■□□□□ 0.72
RIOK3-201ENST00000339486 TRIM26Q12899 539 aaPredicted RBP19.53■□□□□ 0.72
RIOK3-201ENST00000339486 PELP1Q8IZL8 1130 aaKnown RBP19.52■□□□□ 0.71
RIOK3-201ENST00000339486 TRIM41Q8WV44 630 aa19.41■□□□□ 0.7
RIOK3-201ENST00000339486 TTBK1Q5TCY1 1321 aaPredicted RBP19.3■□□□□ 0.68
RIOK3-201ENST00000339486 CCER1Q8TC90 406 aaPredicted RBP19.27■□□□□ 0.67
RIOK3-201ENST00000339486 CENPBP07199 599 aaPredicted RBP19.2■□□□□ 0.66
RIOK3-201ENST00000339486 MYO15BQ96JP2 1530 aa19.12■□□□□ 0.65
RIOK3-201ENST00000339486 YTHDC1Q96MU7 727 aaKnown RBP18.96■□□□□ 0.63
RIOK3-201ENST00000339486 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.92■□□□□ 0.62
RIOK3-201ENST00000339486 DCAF1Q9Y4B6 1507 aa18.91■□□□□ 0.62
RIOK3-201ENST00000339486 ZCCHC6Q5VYS8 1495 aaKnown RBP18.85■□□□□ 0.61
RIOK3-201ENST00000339486 MYT1Q01538 1121 aa18.84■□□□□ 0.61
RIOK3-201ENST00000339486 APLP2Q06481 763 aa18.83■□□□□ 0.6
RIOK3-201ENST00000339486 DIEXFQ68CQ4 756 aaKnown RBP18.78■□□□□ 0.6
RIOK3-201ENST00000339486 UBTFP17480 764 aaKnown RBP18.77■□□□□ 0.59
RIOK3-201ENST00000339486 SCAF1Q9H7N4 1312 aaKnown RBP18.74■□□□□ 0.59
RIOK3-201ENST00000339486 GTF3C3Q9Y5Q9 886 aa18.73■□□□□ 0.59
RIOK3-201ENST00000339486 RANGAP1P46060 587 aaPredicted RBP18.69■□□□□ 0.58
RIOK3-201ENST00000339486 ACIN1Q9UKV3 1341 aaKnown RBP18.68■□□□□ 0.58
RIOK3-201ENST00000339486 NEUROD1Q13562 356 aa18.53■□□□□ 0.56
RIOK3-201ENST00000339486 HNRNPUL2Q1KMD3 747 aaKnown RBP18.53■□□□□ 0.56
RIOK3-201ENST00000339486 CCDC180Q9P1Z9 1646 aa18.4■□□□□ 0.54
RIOK3-201ENST00000339486 ZNF316A6NFI3 1004 aaPredicted RBP18.37■□□□□ 0.53
RIOK3-201ENST00000339486 NEFLP07196 543 aa18.19■□□□□ 0.5
RIOK3-201ENST00000339486 ITGAEP38570 1179 aa18.18■□□□□ 0.5
RIOK3-201ENST00000339486 RSF1Q96T23 1441 aaPredicted RBP18.15■□□□□ 0.5
RIOK3-201ENST00000339486 ERICH6Q7L0X2 663 aa18.12■□□□□ 0.49
RIOK3-201ENST00000339486 SCRIBQ14160 1630 aa18.1■□□□□ 0.49
RIOK3-201ENST00000339486 ATP1B4Q9UN42 357 aaPredicted RBP18.09■□□□□ 0.49
RIOK3-201ENST00000339486 CSRNP3Q8WYN3 585 aa18.08■□□□□ 0.48
RIOK3-201ENST00000339486 MIER1Q8N108 512 aa18.07■□□□□ 0.48
RIOK3-201ENST00000339486 BCANQ96GW7 911 aa18.02■□□□□ 0.47
RIOK3-201ENST00000339486 ABCC9O60706 1549 aa17.99■□□□□ 0.47
RIOK3-201ENST00000339486 CEP162Q5TB80 1403 aa17.84■□□□□ 0.45
RIOK3-201ENST00000339486 RB1CC1Q8TDY2 1594 aa17.81■□□□□ 0.44
RIOK3-201ENST00000339486 PABPN1Q86U42 306 aaKnown RBP eCLIP17.78■□□□□ 0.44
RIOK3-201ENST00000339486 CLSPNQ9HAW4 1339 aa17.74■□□□□ 0.43
RIOK3-201ENST00000339486 CECR2Q9BXF3 1484 aa17.71■□□□□ 0.43
RIOK3-201ENST00000339486 FAM50AQ14320 339 aaKnown RBP17.71■□□□□ 0.43
RIOK3-201ENST00000339486 FKBP8Q14318 412 aa17.7■□□□□ 0.42
RIOK3-201ENST00000339486 TNIKQ9UKE5 1360 aa17.68■□□□□ 0.42
RIOK3-201ENST00000339486 ANP32CO43423 234 aa17.64■□□□□ 0.41
RIOK3-201ENST00000339486 DDX10Q13206 875 aaKnown RBP17.63■□□□□ 0.41
RIOK3-201ENST00000339486 CLIP1P30622 1438 aa17.62■□□□□ 0.41
RIOK3-201ENST00000339486 SUPT16HQ9Y5B9 1047 aaKnown RBP17.6■□□□□ 0.41
RIOK3-201ENST00000339486 CNGB1Q14028 1251 aaPredicted RBP17.59■□□□□ 0.41
RIOK3-201ENST00000339486 SOGA1O94964 1423 aa17.59■□□□□ 0.41
RIOK3-201ENST00000339486 GOLGA3Q08378 1498 aa17.56■□□□□ 0.4
RIOK3-201ENST00000339486 EEA1Q15075 1411 aa17.55■□□□□ 0.4
RIOK3-201ENST00000339486 MROH2BQ7Z745 1585 aa17.54■□□□□ 0.4
RIOK3-201ENST00000339486 TRIM52Q96A61 297 aa17.54■□□□□ 0.4
RIOK3-201ENST00000339486 CDK11AQ9UQ88 783 aaPredicted RBP17.53■□□□□ 0.4
RIOK3-201ENST00000339486 ANP32EQ9BTT0 268 aa17.52■□□□□ 0.4
RIOK3-201ENST00000339486 POLR3GLQ9BT43 218 aa17.51■□□□□ 0.39
RIOK3-201ENST00000339486 CCDC88BA6NC98 1476 aa17.5■□□□□ 0.39
RIOK3-201ENST00000339486 HIRIP3Q9BW71 556 aaPredicted RBP17.47■□□□□ 0.39
RIOK3-201ENST00000339486 ABCC8Q09428 1581 aa17.46■□□□□ 0.38
RIOK3-201ENST00000339486 P3H3Q8IVL6 736 aa17.44■□□□□ 0.38
RIOK3-201ENST00000339486 WRNQ14191 1432 aaPredicted RBP eCLIP17.42■□□□□ 0.38
RIOK3-201ENST00000339486 HNRNPUQ00839 825 aaKnown RBP eCLIP17.38■□□□□ 0.37
RIOK3-201ENST00000339486 CEP164Q9UPV0 1460 aa17.37■□□□□ 0.37
RIOK3-201ENST00000339486 TSHZ2Q9NRE2 1034 aa17.37■□□□□ 0.37
RIOK3-201ENST00000339486 WIZO95785 1651 aa17.35■□□□□ 0.37
RIOK3-201ENST00000339486 IRX6P78412 446 aaPredicted RBP17.35■□□□□ 0.37
RIOK3-201ENST00000339486 RTL5Q5HYW3 569 aaPredicted RBP17.34■□□□□ 0.37
RIOK3-201ENST00000339486 BAZ1AQ9NRL2 1556 aaPredicted RBP17.33■□□□□ 0.36
RIOK3-201ENST00000339486 NACADO15069 1562 aa17.31■□□□□ 0.36
RIOK3-201ENST00000339486 VPS8Q8N3P4 1428 aa17.29■□□□□ 0.36
RIOK3-201ENST00000339486 TONSLQ96HA7 1378 aa17.29■□□□□ 0.36
RIOK3-201ENST00000339486 RUSC2Q8N2Y8 1516 aa17.28■□□□□ 0.36
RIOK3-201ENST00000339486 SIN3AQ96ST3 1273 aa17.27■□□□□ 0.35
RIOK3-201ENST00000339486 BCL11AQ9H165 835 aa17.25■□□□□ 0.35
RIOK3-201ENST00000339486 KANK4Q5T7N3 995 aaPredicted RBP17.25■□□□□ 0.35
RIOK3-201ENST00000339486 KCNH8Q96L42 1107 aa17.23■□□□□ 0.35
RIOK3-201ENST00000339486 FAM9BQ8IZU0 186 aa17.21■□□□□ 0.35
RIOK3-201ENST00000339486 RBM19Q9Y4C8 960 aaKnown RBP17.21■□□□□ 0.35
RIOK3-201ENST00000339486 DAXXQ9UER7 740 aaPredicted RBP17.17■□□□□ 0.34
RIOK3-201ENST00000339486 CCNB3Q8WWL7 1395 aa17.16■□□□□ 0.34
RIOK3-201ENST00000339486 ZNF326Q5BKZ1 582 aaKnown RBP17.15■□□□□ 0.34
RIOK3-201ENST00000339486 DHX57Q6P158 1386 aaKnown RBP17.15■□□□□ 0.34
RIOK3-201ENST00000339486 NBR1Q14596 966 aa17.14■□□□□ 0.33
RIOK3-201ENST00000339486 ANP32AP39687 249 aaKnown RBP17.12■□□□□ 0.33
RIOK3-201ENST00000339486 TOP2AP11388 1531 aaKnown RBP17.08■□□□□ 0.33
RIOK3-201ENST00000339486 MRS2Q9HD23 443 aa17.08■□□□□ 0.32
RIOK3-201ENST00000339486 NPM2Q86SE8 214 aaKnown RBP17.06■□□□□ 0.32
RIOK3-201ENST00000339486 ARID3CA6NKF2 412 aa17.06■□□□□ 0.32
RIOK3-201ENST00000339486 CHIC2Q9UKJ5 165 aa17.06■□□□□ 0.32
RIOK3-201ENST00000339486 RAPGEF2Q9Y4G8 1499 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms