RNA–Protein interactions for RNA: ENST00000577501.5

RIOK3-203, Transcript of RIO kinase 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RIOK3, Length 1,904 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-203ENST00000577501 NISCHQ9Y2I1 1504 aa24.82■■□□□ 1.56
RIOK3-203ENST00000577501 HRCP23327 699 aa22.39■■□□□ 1.17
RIOK3-203ENST00000577501 PELP1Q8IZL8 1130 aaKnown RBP22.15■■□□□ 1.14
RIOK3-203ENST00000577501 MYO15BQ96JP2 1530 aa21.59■■□□□ 1.05
RIOK3-203ENST00000577501 DCAF1Q9Y4B6 1507 aa21.59■■□□□ 1.05
RIOK3-203ENST00000577501 PCGF6Q9BYE7 350 aa21.57■■□□□ 1.04
RIOK3-203ENST00000577501 PPARGC1BQ86YN6 1023 aaKnown RBP21.49■■□□□ 1.03
RIOK3-203ENST00000577501 MYT1Q01538 1121 aa21.48■■□□□ 1.03
RIOK3-203ENST00000577501 CHIC1Q5VXU3 224 aa21.47■■□□□ 1.03
RIOK3-203ENST00000577501 SUPT5HO00267 1087 aaKnown RBP21.46■■□□□ 1.03
RIOK3-203ENST00000577501 SHROOM4Q9ULL8 1493 aa21.44■■□□□ 1.02
RIOK3-203ENST00000577501 CCDC180Q9P1Z9 1646 aa21.36■■□□□ 1.01
RIOK3-203ENST00000577501 ZEB1P37275 1124 aaPredicted RBP21.25■□□□□ 0.99
RIOK3-203ENST00000577501 ZCCHC6Q5VYS8 1495 aaKnown RBP21.21■□□□□ 0.99
RIOK3-203ENST00000577501 TRIM26Q12899 539 aaPredicted RBP21.16■□□□□ 0.98
RIOK3-203ENST00000577501 SCAF1Q9H7N4 1312 aaKnown RBP21.08■□□□□ 0.97
RIOK3-203ENST00000577501 LOC105371045A0A1W2PR82 267 aa20.69■□□□□ 0.9
RIOK3-203ENST00000577501 ACIN1Q9UKV3 1341 aaKnown RBP20.68■□□□□ 0.9
RIOK3-203ENST00000577501 CENPBP07199 599 aaPredicted RBP20.49■□□□□ 0.87
RIOK3-203ENST00000577501 NEUROD1Q13562 356 aa20.44■□□□□ 0.86
RIOK3-203ENST00000577501 GTF3C3Q9Y5Q9 886 aa20.35■□□□□ 0.85
RIOK3-203ENST00000577501 TTBK1Q5TCY1 1321 aaPredicted RBP20.27■□□□□ 0.84
RIOK3-203ENST00000577501 ABCC9O60706 1549 aa20.21■□□□□ 0.83
RIOK3-203ENST00000577501 DIEXFQ68CQ4 756 aaKnown RBP20.17■□□□□ 0.82
RIOK3-203ENST00000577501 TRIM41Q8WV44 630 aa20.06■□□□□ 0.8
RIOK3-203ENST00000577501 CCER1Q8TC90 406 aaPredicted RBP20.02■□□□□ 0.8
RIOK3-203ENST00000577501 RB1CC1Q8TDY2 1594 aa19.96■□□□□ 0.79
RIOK3-203ENST00000577501 CLSPNQ9HAW4 1339 aa19.92■□□□□ 0.78
RIOK3-203ENST00000577501 RSF1Q96T23 1441 aaPredicted RBP19.91■□□□□ 0.78
RIOK3-203ENST00000577501 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.91■□□□□ 0.78
RIOK3-203ENST00000577501 DCAF8L2P0C7V8 631 aa19.91■□□□□ 0.78
RIOK3-203ENST00000577501 ZNF316A6NFI3 1004 aaPredicted RBP19.86■□□□□ 0.77
RIOK3-203ENST00000577501 WRNQ14191 1432 aaPredicted RBP eCLIP19.82■□□□□ 0.76
RIOK3-203ENST00000577501 FAM9AQ8IZU1 332 aaPredicted RBP19.73■□□□□ 0.75
RIOK3-203ENST00000577501 ANP32EQ9BTT0 268 aa19.61■□□□□ 0.73
RIOK3-203ENST00000577501 MIER1Q8N108 512 aa19.56■□□□□ 0.72
RIOK3-203ENST00000577501 YTHDC1Q96MU7 727 aaKnown RBP19.56■□□□□ 0.72
RIOK3-203ENST00000577501 BCL11AQ9H165 835 aa19.55■□□□□ 0.72
RIOK3-203ENST00000577501 EIF4G1Q04637 1599 aaKnown RBP19.49■□□□□ 0.71
RIOK3-203ENST00000577501 SUPT16HQ9Y5B9 1047 aaKnown RBP19.45■□□□□ 0.7
RIOK3-203ENST00000577501 CEP162Q5TB80 1403 aa19.43■□□□□ 0.7
RIOK3-203ENST00000577501 SCRIBQ14160 1630 aa19.43■□□□□ 0.7
RIOK3-203ENST00000577501 TNIKQ9UKE5 1360 aa19.42■□□□□ 0.7
RIOK3-203ENST00000577501 TSHZ2Q9NRE2 1034 aa19.39■□□□□ 0.7
RIOK3-203ENST00000577501 EHMT2Q96KQ7 1210 aa19.37■□□□□ 0.69
RIOK3-203ENST00000577501 EEA1Q15075 1411 aa19.35■□□□□ 0.69
RIOK3-203ENST00000577501 BAZ1AQ9NRL2 1556 aaPredicted RBP19.31■□□□□ 0.68
RIOK3-203ENST00000577501 MROH2BQ7Z745 1585 aa19.25■□□□□ 0.67
RIOK3-203ENST00000577501 CSRNP3Q8WYN3 585 aa19.2■□□□□ 0.66
RIOK3-203ENST00000577501 WIZO95785 1651 aa19.19■□□□□ 0.66
RIOK3-203ENST00000577501 GOLGA3Q08378 1498 aa19.15■□□□□ 0.66
RIOK3-203ENST00000577501 CECR2Q9BXF3 1484 aa19.15■□□□□ 0.66
RIOK3-203ENST00000577501 CCDC88BA6NC98 1476 aa19.11■□□□□ 0.65
RIOK3-203ENST00000577501 NACADO15069 1562 aa19.08■□□□□ 0.64
RIOK3-203ENST00000577501 ABCC8Q09428 1581 aa19.06■□□□□ 0.64
RIOK3-203ENST00000577501 TOP2AP11388 1531 aaKnown RBP19.03■□□□□ 0.64
RIOK3-203ENST00000577501 KIF21BO75037 1637 aa19.02■□□□□ 0.63
RIOK3-203ENST00000577501 SOGA1O94964 1423 aa19.01■□□□□ 0.63
RIOK3-203ENST00000577501 HNRNPUL2Q1KMD3 747 aaKnown RBP18.98■□□□□ 0.63
RIOK3-203ENST00000577501 VPS8Q8N3P4 1428 aa18.98■□□□□ 0.63
RIOK3-203ENST00000577501 MYT1LQ9UL68 1186 aa18.96■□□□□ 0.63
RIOK3-203ENST00000577501 CEP164Q9UPV0 1460 aa18.96■□□□□ 0.63
RIOK3-203ENST00000577501 DHX57Q6P158 1386 aaKnown RBP18.95■□□□□ 0.62
RIOK3-203ENST00000577501 UBTFP17480 764 aaKnown RBP18.93■□□□□ 0.62
RIOK3-203ENST00000577501 BAZ1BQ9UIG0 1483 aaKnown RBP18.93■□□□□ 0.62
RIOK3-203ENST00000577501 RBM19Q9Y4C8 960 aaKnown RBP18.92■□□□□ 0.62
RIOK3-203ENST00000577501 SMARCA2P51531 1590 aa18.91■□□□□ 0.62
RIOK3-203ENST00000577501 CLIP1P30622 1438 aa18.89■□□□□ 0.61
RIOK3-203ENST00000577501 CUX2O14529 1486 aa18.85■□□□□ 0.61
RIOK3-203ENST00000577501 FANCIQ9NVI1 1328 aa18.83■□□□□ 0.61
RIOK3-203ENST00000577501 RUSC2Q8N2Y8 1516 aa18.83■□□□□ 0.61
RIOK3-203ENST00000577501 NEFLP07196 543 aa18.82■□□□□ 0.6
RIOK3-203ENST00000577501 APLP2Q06481 763 aa18.82■□□□□ 0.6
RIOK3-203ENST00000577501 FKBP8Q14318 412 aa18.81■□□□□ 0.6
RIOK3-203ENST00000577501 PRKCSHP14314 528 aaPredicted RBP18.8■□□□□ 0.6
RIOK3-203ENST00000577501 ERICH6Q7L0X2 663 aa18.8■□□□□ 0.6
RIOK3-203ENST00000577501 SMARCA4P51532 1647 aa18.73■□□□□ 0.59
RIOK3-203ENST00000577501 RRBP1Q9P2E9 1410 aaKnown RBP18.71■□□□□ 0.59
RIOK3-203ENST00000577501 BCANQ96GW7 911 aa18.7■□□□□ 0.58
RIOK3-203ENST00000577501 MSH5O43196 834 aa18.69■□□□□ 0.58
RIOK3-203ENST00000577501 CCER2I3L3R5 266 aa18.68■□□□□ 0.58
RIOK3-203ENST00000577501 ERICH6BQ5W0A0 696 aa18.6■□□□□ 0.57
RIOK3-203ENST00000577501 KCNH8Q96L42 1107 aa18.59■□□□□ 0.57
RIOK3-203ENST00000577501 ERICH3Q5RHP9 1530 aa18.56■□□□□ 0.56
RIOK3-203ENST00000577501 CDK11AQ9UQ88 783 aaPredicted RBP18.56■□□□□ 0.56
RIOK3-203ENST00000577501 SYNJ1O43426 1573 aa18.56■□□□□ 0.56
RIOK3-203ENST00000577501 RAPGEF2Q9Y4G8 1499 aa18.55■□□□□ 0.56
RIOK3-203ENST00000577501 TIMELESSQ9UNS1 1208 aa18.55■□□□□ 0.56
RIOK3-203ENST00000577501 MAPKBP1O60336 1514 aa18.54■□□□□ 0.56
RIOK3-203ENST00000577501 PPP1R15AO75807 674 aaPredicted RBP18.53■□□□□ 0.56
RIOK3-203ENST00000577501 ARAP1Q96P48 1450 aa18.5■□□□□ 0.55
RIOK3-203ENST00000577501 CCNB3Q8WWL7 1395 aa18.49■□□□□ 0.55
RIOK3-203ENST00000577501 DEKP35659 375 aaKnown RBP18.48■□□□□ 0.55
RIOK3-203ENST00000577501 ANP32CO43423 234 aa18.45■□□□□ 0.54
RIOK3-203ENST00000577501 ITGAEP38570 1179 aa18.45■□□□□ 0.54
RIOK3-203ENST00000577501 PEG3Q9GZU2 1588 aa18.44■□□□□ 0.54
RIOK3-203ENST00000577501 WDR97A6NE52 1622 aa18.43■□□□□ 0.54
RIOK3-203ENST00000577501 DDX10Q13206 875 aaKnown RBP18.43■□□□□ 0.54
RIOK3-203ENST00000577501 RAB3GAP2Q9H2M9 1393 aa18.4■□□□□ 0.54
RIOK3-203ENST00000577501 MAP3K1Q13233 1512 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms