RNA–Protein interactions for RNA: ENST00000519656.1

EFR3A-202, Transcript of EFR3 homolog A, humanhuman

TSL 1 (best) BASIC

Gene EFR3A, Length 5,247 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-202ENST00000519656 AEBP2Q6ZN18 517 aaPredicted RBP6.56□□□□□ -1.36
EFR3A-202ENST00000519656 CHIC1Q5VXU3 224 aa6.49□□□□□ -1.37
EFR3A-202ENST00000519656 NISCHQ9Y2I1 1504 aa6.11□□□□□ -1.43
EFR3A-202ENST00000519656 SENP3Q9H4L4 574 aaPredicted RBP5.92□□□□□ -1.46
EFR3A-202ENST00000519656 DCAF8L2P0C7V8 631 aa5.87□□□□□ -1.47
EFR3A-202ENST00000519656 ABCC9O60706 1549 aa5.79□□□□□ -1.48
EFR3A-202ENST00000519656 PHF23Q9BUL5 403 aaPredicted RBP5.67□□□□□ -1.5
EFR3A-202ENST00000519656 PABPN1Q86U42 306 aaKnown RBP eCLIP5.48□□□□□ -1.53
EFR3A-202ENST00000519656 DNAJC5Q9H3Z4 198 aa5.46□□□□□ -1.53
EFR3A-202ENST00000519656 RB1CC1Q8TDY2 1594 aa5.41□□□□□ -1.54
EFR3A-202ENST00000519656 TRIM41Q8WV44 630 aa5.4□□□□□ -1.55
EFR3A-202ENST00000519656 DNAJC5BQ9UF47 199 aa5.35□□□□□ -1.55
EFR3A-202ENST00000519656 CCDC180Q9P1Z9 1646 aa5.32□□□□□ -1.56
EFR3A-202ENST00000519656 FOXD1Q16676 465 aa5.3□□□□□ -1.56
EFR3A-202ENST00000519656 NACADO15069 1562 aa5.29□□□□□ -1.56
EFR3A-202ENST00000519656 ERCC6Q03468 1493 aa5.27□□□□□ -1.57
EFR3A-202ENST00000519656 CECR2Q9BXF3 1484 aa5.27□□□□□ -1.57
EFR3A-202ENST00000519656 FAM9AQ8IZU1 332 aaPredicted RBP5.27□□□□□ -1.57
EFR3A-202ENST00000519656 MSH5O43196 834 aa5.25□□□□□ -1.57
EFR3A-202ENST00000519656 TRHP20396 242 aaPredicted RBP5.25□□□□□ -1.57
EFR3A-202ENST00000519656 PLPPR3Q6T4P5 718 aa5.23□□□□□ -1.57
EFR3A-202ENST00000519656 SHROOM4Q9ULL8 1493 aa5.17□□□□□ -1.58
EFR3A-202ENST00000519656 OSCARQ8IYS5 282 aa5.16□□□□□ -1.58
EFR3A-202ENST00000519656 CUX2O14529 1486 aa5.14□□□□□ -1.59
EFR3A-202ENST00000519656 NPM1P06748 294 aaKnown RBP eCLIP5.13□□□□□ -1.59
EFR3A-202ENST00000519656 FBLN2P98095 1184 aa5.09□□□□□ -1.6
EFR3A-202ENST00000519656 PDS5BQ9NTI5 1447 aa5.08□□□□□ -1.6
EFR3A-202ENST00000519656 SCRIBQ14160 1630 aa5.07□□□□□ -1.6
EFR3A-202ENST00000519656 MYO15BQ96JP2 1530 aa5.07□□□□□ -1.6
EFR3A-202ENST00000519656 CYB5RLQ6IPT4 315 aa5.02□□□□□ -1.61
EFR3A-202ENST00000519656 CC2D2AQ9P2K1 1620 aa4.98□□□□□ -1.61
EFR3A-202ENST00000519656 CHMP7Q8WUX9 453 aaPredicted RBP4.98□□□□□ -1.61
EFR3A-202ENST00000519656 PIAS4Q8N2W9 510 aaPredicted RBP4.97□□□□□ -1.61
EFR3A-202ENST00000519656 EIF4G1Q04637 1599 aaKnown RBP4.97□□□□□ -1.61
EFR3A-202ENST00000519656 BAZ1BQ9UIG0 1483 aaKnown RBP4.92□□□□□ -1.62
EFR3A-202ENST00000519656 DCAF1Q9Y4B6 1507 aa4.91□□□□□ -1.62
EFR3A-202ENST00000519656 DCAF8L1A6NGE4 600 aa4.91□□□□□ -1.62
EFR3A-202ENST00000519656 SMARCA2P51531 1590 aa4.91□□□□□ -1.62
EFR3A-202ENST00000519656 NCAPD3P42695 1498 aa4.89□□□□□ -1.63
EFR3A-202ENST00000519656 POTEDQ86YR6 584 aa4.88□□□□□ -1.63
EFR3A-202ENST00000519656 CADPSQ9ULU8 1353 aa4.88□□□□□ -1.63
EFR3A-202ENST00000519656 ESF1Q9H501 851 aaKnown RBP4.87□□□□□ -1.63
EFR3A-202ENST00000519656 MYT1LQ9UL68 1186 aa4.85□□□□□ -1.63
EFR3A-202ENST00000519656 FBXO41Q8TF61 875 aa4.84□□□□□ -1.63
EFR3A-202ENST00000519656 ZCCHC6Q5VYS8 1495 aaKnown RBP4.84□□□□□ -1.63
EFR3A-202ENST00000519656 CEP164Q9UPV0 1460 aa4.84□□□□□ -1.64
EFR3A-202ENST00000519656 ILDR1Q86SU0 546 aaPredicted RBP4.83□□□□□ -1.64
EFR3A-202ENST00000519656 MRC2Q9UBG0 1479 aa4.83□□□□□ -1.64
EFR3A-202ENST00000519656 SCAF1Q9H7N4 1312 aaKnown RBP4.83□□□□□ -1.64
EFR3A-202ENST00000519656 BICRAQ9NZM4 1560 aa4.82□□□□□ -1.64
EFR3A-202ENST00000519656 LMTK3Q96Q04 1460 aa4.81□□□□□ -1.64
EFR3A-202ENST00000519656 DISP3Q9P2K9 1392 aa4.81□□□□□ -1.64
EFR3A-202ENST00000519656 ABCC8Q09428 1581 aa4.81□□□□□ -1.64
EFR3A-202ENST00000519656 ADRA2BP18089 450 aa4.81□□□□□ -1.64
EFR3A-202ENST00000519656 ATAD2BQ9ULI0 1458 aa4.81□□□□□ -1.64
EFR3A-202ENST00000519656 TTBK1Q5TCY1 1321 aaPredicted RBP4.79□□□□□ -1.64
EFR3A-202ENST00000519656 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.79□□□□□ -1.64
EFR3A-202ENST00000519656 HNRNPUL2Q1KMD3 747 aaKnown RBP4.79□□□□□ -1.64
EFR3A-202ENST00000519656 ARID4BQ4LE39 1312 aaPredicted RBP4.79□□□□□ -1.64
EFR3A-202ENST00000519656 FAM69CQ0P6D2 419 aa4.79□□□□□ -1.64
EFR3A-202ENST00000519656 PPP6R1Q9UPN7 881 aa4.79□□□□□ -1.64
EFR3A-202ENST00000519656 BAZ1AQ9NRL2 1556 aaPredicted RBP4.78□□□□□ -1.64
EFR3A-202ENST00000519656 SOCS7O14512 581 aa4.78□□□□□ -1.64
EFR3A-202ENST00000519656 LAMC3Q9Y6N6 1575 aa4.78□□□□□ -1.64
EFR3A-202ENST00000519656 DMRT2Q9Y5R5 561 aa4.78□□□□□ -1.64
EFR3A-202ENST00000519656 HMGXB3Q12766 1538 aa4.74□□□□□ -1.65
EFR3A-202ENST00000519656 IFT140Q96RY7 1462 aa4.74□□□□□ -1.65
EFR3A-202ENST00000519656 FANCD2Q9BXW9 1451 aa4.74□□□□□ -1.65
EFR3A-202ENST00000519656 RSF1Q96T23 1441 aaPredicted RBP4.72□□□□□ -1.65
EFR3A-202ENST00000519656 NESP48681 1621 aa4.71□□□□□ -1.66
EFR3A-202ENST00000519656 UNC13AQ9UPW8 1703 aa4.7□□□□□ -1.66
EFR3A-202ENST00000519656 SOGA1O94964 1423 aa4.69□□□□□ -1.66
EFR3A-202ENST00000519656 CARMIL2Q6F5E8 1435 aa4.68□□□□□ -1.66
EFR3A-202ENST00000519656 JPH4Q96JJ6 628 aa4.67□□□□□ -1.66
EFR3A-202ENST00000519656 CDK11AQ9UQ88 783 aaPredicted RBP4.67□□□□□ -1.66
EFR3A-202ENST00000519656 ERCC6L2Q5T890 1561 aa4.66□□□□□ -1.66
EFR3A-202ENST00000519656 SUPT5HO00267 1087 aaKnown RBP4.66□□□□□ -1.66
EFR3A-202ENST00000519656 TDRD9Q8NDG6 1382 aaKnown RBP4.66□□□□□ -1.66
EFR3A-202ENST00000519656 ATP1B4Q9UN42 357 aaPredicted RBP4.65□□□□□ -1.67
EFR3A-202ENST00000519656 ARHGEF11O15085 1522 aa4.64□□□□□ -1.67
EFR3A-202ENST00000519656 KCNH8Q96L42 1107 aa4.64□□□□□ -1.67
EFR3A-202ENST00000519656 POGZQ7Z3K3 1410 aa4.64□□□□□ -1.67
EFR3A-202ENST00000519656 GAPVD1Q14C86 1478 aa4.63□□□□□ -1.67
EFR3A-202ENST00000519656 SYNJ1O43426 1573 aa4.62□□□□□ -1.67
EFR3A-202ENST00000519656 GRIN2BQ13224 1484 aa4.62□□□□□ -1.67
EFR3A-202ENST00000519656 SMARCA4P51532 1647 aa4.62□□□□□ -1.67
EFR3A-202ENST00000519656 PTPRGP23470 1445 aa4.61□□□□□ -1.67
EFR3A-202ENST00000519656 PLEKHD1A6NEE1 506 aa4.6□□□□□ -1.67
EFR3A-202ENST00000519656 CFTRP13569 1480 aa4.6□□□□□ -1.67
EFR3A-202ENST00000519656 MROH2BQ7Z745 1585 aa4.6□□□□□ -1.67
EFR3A-202ENST00000519656 WRNQ14191 1432 aaPredicted RBP eCLIP4.6□□□□□ -1.67
EFR3A-202ENST00000519656 TEX14Q8IWB6 1497 aa4.59□□□□□ -1.67
EFR3A-202ENST00000519656 WDR62O43379 1518 aa4.59□□□□□ -1.67
EFR3A-202ENST00000519656 AQRO60306 1485 aaKnown RBP eCLIP4.59□□□□□ -1.68
EFR3A-202ENST00000519656 MAGI1Q96QZ7 1491 aaPredicted RBP4.59□□□□□ -1.68
EFR3A-202ENST00000519656 TOM1O60784 492 aa4.59□□□□□ -1.68
EFR3A-202ENST00000519656 MLECQ14165 292 aa4.57□□□□□ -1.68
EFR3A-202ENST00000519656 UBAP1LF5GYI3 381 aa4.57□□□□□ -1.68
EFR3A-202ENST00000519656 BCANQ96GW7 911 aa4.57□□□□□ -1.68
EFR3A-202ENST00000519656 PHLDB1Q86UU1 1377 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms